RNA–Protein interactions for RNA: ENST00000423927.2

KNTC1-203, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-203ENST00000423927 USP6P35125 1406 aa12.12□□□□□ -0.47
KNTC1-203ENST00000423927 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
KNTC1-203ENST00000423927 CD2APQ9Y5K6 639 aa12.12□□□□□ -0.47
KNTC1-203ENST00000423927 COL18A1P39060 1754 aa12.12□□□□□ -0.47
KNTC1-203ENST00000423927 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
KNTC1-203ENST00000423927 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
KNTC1-203ENST00000423927 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
KNTC1-203ENST00000423927 NLRP6P59044 892 aa12.09□□□□□ -0.47
KNTC1-203ENST00000423927 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
KNTC1-203ENST00000423927 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
KNTC1-203ENST00000423927 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
KNTC1-203ENST00000423927 TRPM1Q7Z4N2 1603 aa12.08□□□□□ -0.48
KNTC1-203ENST00000423927 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
KNTC1-203ENST00000423927 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
KNTC1-203ENST00000423927 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
KNTC1-203ENST00000423927 HTRA3P83110 453 aa12.07□□□□□ -0.48
KNTC1-203ENST00000423927 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
KNTC1-203ENST00000423927 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
KNTC1-203ENST00000423927 FSTL1Q12841 308 aa12.06□□□□□ -0.48
KNTC1-203ENST00000423927 ABCC6O95255 1503 aa12.06□□□□□ -0.48
KNTC1-203ENST00000423927 HSPA1AP0DMV8 641 aaKnown RBP12.05□□□□□ -0.48
KNTC1-203ENST00000423927 HSPA1BP0DMV9 641 aaKnown RBP12.05□□□□□ -0.48
KNTC1-203ENST00000423927 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
KNTC1-203ENST00000423927 PPIP5K1Q6PFW1 1433 aa12.04□□□□□ -0.48
KNTC1-203ENST00000423927 LY75O60449 1722 aa12.04□□□□□ -0.48
KNTC1-203ENST00000423927 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
KNTC1-203ENST00000423927 COL23A1Q86Y22 540 aaPredicted RBP12.04□□□□□ -0.48
KNTC1-203ENST00000423927 SLIT3O75094 1523 aa12.04□□□□□ -0.48
KNTC1-203ENST00000423927 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
KNTC1-203ENST00000423927 NMRK2Q9NPI5 230 aa12.03□□□□□ -0.48
KNTC1-203ENST00000423927 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
KNTC1-203ENST00000423927 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
KNTC1-203ENST00000423927 KCNQ4P56696 695 aa12.02□□□□□ -0.49
KNTC1-203ENST00000423927 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
KNTC1-203ENST00000423927 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
KNTC1-203ENST00000423927 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
KNTC1-203ENST00000423927 IL2RBP14784 551 aa12.01□□□□□ -0.49
KNTC1-203ENST00000423927 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
KNTC1-203ENST00000423927 FLAD1Q8NFF5 587 aa12.01□□□□□ -0.49
KNTC1-203ENST00000423927 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
KNTC1-203ENST00000423927 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
KNTC1-203ENST00000423927 NLRP2Q9NX02 1062 aa11.99□□□□□ -0.49
KNTC1-203ENST00000423927 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
KNTC1-203ENST00000423927 SOX12O15370 315 aa11.98□□□□□ -0.49
KNTC1-203ENST00000423927 SRPK2P78362 688 aaKnown RBP11.98□□□□□ -0.49
KNTC1-203ENST00000423927 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
KNTC1-203ENST00000423927 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
KNTC1-203ENST00000423927 SMC1BQ8NDV3 1235 aa11.97□□□□□ -0.49
KNTC1-203ENST00000423927 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
KNTC1-203ENST00000423927 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
KNTC1-203ENST00000423927 TAF1LQ8IZX4 1826 aa11.97□□□□□ -0.49
KNTC1-203ENST00000423927 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
KNTC1-203ENST00000423927 KDM2BQ8NHM5 1336 aa11.96□□□□□ -0.49
KNTC1-203ENST00000423927 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
KNTC1-203ENST00000423927 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
KNTC1-203ENST00000423927 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
KNTC1-203ENST00000423927 C5P01031 1676 aa11.96□□□□□ -0.5
KNTC1-203ENST00000423927 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
KNTC1-203ENST00000423927 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
KNTC1-203ENST00000423927 ZBTB22O15209 634 aa11.95□□□□□ -0.5
KNTC1-203ENST00000423927 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
KNTC1-203ENST00000423927 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
KNTC1-203ENST00000423927 PLEKHG2Q9H7P9 1386 aa11.94□□□□□ -0.5
KNTC1-203ENST00000423927 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
KNTC1-203ENST00000423927 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
KNTC1-203ENST00000423927 PPARGC1BQ86YN6 1023 aaKnown RBP11.94□□□□□ -0.5
KNTC1-203ENST00000423927 DCAF11Q8TEB1 546 aa11.94□□□□□ -0.5
KNTC1-203ENST00000423927 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
KNTC1-203ENST00000423927 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
KNTC1-203ENST00000423927 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
KNTC1-203ENST00000423927 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
KNTC1-203ENST00000423927 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
KNTC1-203ENST00000423927 USP47Q96K76 1375 aa11.92□□□□□ -0.5
KNTC1-203ENST00000423927 LTN1O94822 1766 aa11.92□□□□□ -0.5
KNTC1-203ENST00000423927 USP54Q70EL1 1684 aa11.92□□□□□ -0.5
KNTC1-203ENST00000423927 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
KNTC1-203ENST00000423927 KIF13BQ9NQT8 1826 aa11.92□□□□□ -0.5
KNTC1-203ENST00000423927 SBF1O95248 1867 aa11.91□□□□□ -0.5
KNTC1-203ENST00000423927 ERBB3P21860 1342 aa11.91□□□□□ -0.5
KNTC1-203ENST00000423927 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
KNTC1-203ENST00000423927 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
KNTC1-203ENST00000423927 C9orf131Q5VYM1 1079 aa11.9□□□□□ -0.5
KNTC1-203ENST00000423927 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
KNTC1-203ENST00000423927 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
KNTC1-203ENST00000423927 PRDM10Q9NQV6 1147 aa11.9□□□□□ -0.5
KNTC1-203ENST00000423927 TGFB2P61812 414 aa11.89□□□□□ -0.51
KNTC1-203ENST00000423927 MLLT1Q03111 559 aaPredicted RBP11.89□□□□□ -0.51
KNTC1-203ENST00000423927 AK7Q96M32 723 aa11.89□□□□□ -0.51
KNTC1-203ENST00000423927 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
KNTC1-203ENST00000423927 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
KNTC1-203ENST00000423927 NSD3Q9BZ95 1437 aa11.88□□□□□ -0.51
KNTC1-203ENST00000423927 NFAT5O94916 1531 aa11.88□□□□□ -0.51
KNTC1-203ENST00000423927 FCHSD2O94868 740 aa11.88□□□□□ -0.51
KNTC1-203ENST00000423927 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
KNTC1-203ENST00000423927 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
KNTC1-203ENST00000423927 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
KNTC1-203ENST00000423927 KIAA1210Q9ULL0 1709 aa11.87□□□□□ -0.51
KNTC1-203ENST00000423927 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
KNTC1-203ENST00000423927 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
KNTC1-203ENST00000423927 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms