RNA–Protein interactions for RNA: ENST00000423670.1

SCYL3-204, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-204ENST00000423670 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
SCYL3-204ENST00000423670 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
SCYL3-204ENST00000423670 GCP02774 474 aa11.73□□□□□ -0.53
SCYL3-204ENST00000423670 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
SCYL3-204ENST00000423670 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
SCYL3-204ENST00000423670 SLIT3O75094 1523 aa11.73□□□□□ -0.53
SCYL3-204ENST00000423670 RGPD2P0DJD1 1756 aa11.73□□□□□ -0.53
SCYL3-204ENST00000423670 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
SCYL3-204ENST00000423670 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
SCYL3-204ENST00000423670 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
SCYL3-204ENST00000423670 ARHGEF25Q86VW2 580 aa11.72□□□□□ -0.53
SCYL3-204ENST00000423670 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
SCYL3-204ENST00000423670 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
SCYL3-204ENST00000423670 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
SCYL3-204ENST00000423670 ABCC4O15439 1325 aa11.71□□□□□ -0.53
SCYL3-204ENST00000423670 USP19O94966 1318 aa11.71□□□□□ -0.53
SCYL3-204ENST00000423670 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
SCYL3-204ENST00000423670 LRRC59Q96AG4 307 aaKnown RBP11.71□□□□□ -0.53
SCYL3-204ENST00000423670 LRRC37A3O60309 1634 aa11.71□□□□□ -0.53
SCYL3-204ENST00000423670 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.54
SCYL3-204ENST00000423670 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.54
SCYL3-204ENST00000423670 LMOD2Q6P5Q4 547 aa11.71□□□□□ -0.54
SCYL3-204ENST00000423670 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.54
SCYL3-204ENST00000423670 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.54
SCYL3-204ENST00000423670 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.54
SCYL3-204ENST00000423670 KIF1AQ12756 1690 aa11.7□□□□□ -0.54
SCYL3-204ENST00000423670 RGS12O14924 1447 aa11.7□□□□□ -0.54
SCYL3-204ENST00000423670 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
SCYL3-204ENST00000423670 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
SCYL3-204ENST00000423670 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 MED1Q15648 1581 aaPredicted RBP11.69□□□□□ -0.54
SCYL3-204ENST00000423670 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 HTATSF1O43719 755 aaKnown RBP11.69□□□□□ -0.54
SCYL3-204ENST00000423670 ATF3P18847 181 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
SCYL3-204ENST00000423670 TSPYL4Q9UJ04 414 aa11.69□□□□□ -0.54
SCYL3-204ENST00000423670 XIRP1Q702N8 1843 aaKnown RBP11.69□□□□□ -0.54
SCYL3-204ENST00000423670 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
SCYL3-204ENST00000423670 DCCP43146 1447 aa11.68□□□□□ -0.54
SCYL3-204ENST00000423670 NCOA3Q9Y6Q9 1424 aa11.68□□□□□ -0.54
SCYL3-204ENST00000423670 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
SCYL3-204ENST00000423670 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
SCYL3-204ENST00000423670 NCAPD2Q15021 1401 aa11.67□□□□□ -0.54
SCYL3-204ENST00000423670 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
SCYL3-204ENST00000423670 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
SCYL3-204ENST00000423670 MYT1Q01538 1121 aa11.66□□□□□ -0.54
SCYL3-204ENST00000423670 SMC5Q8IY18 1101 aa11.66□□□□□ -0.54
SCYL3-204ENST00000423670 G2E3Q7L622 706 aa11.66□□□□□ -0.54
SCYL3-204ENST00000423670 SIRT2Q8IXJ6 389 aa11.66□□□□□ -0.54
SCYL3-204ENST00000423670 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
SCYL3-204ENST00000423670 API5Q9BZZ5 524 aaKnown RBP11.66□□□□□ -0.54
SCYL3-204ENST00000423670 LGR6Q9HBX8 967 aa11.66□□□□□ -0.54
SCYL3-204ENST00000423670 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.54
SCYL3-204ENST00000423670 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
SCYL3-204ENST00000423670 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
SCYL3-204ENST00000423670 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
SCYL3-204ENST00000423670 PXDNQ92626 1479 aa11.64□□□□□ -0.55
SCYL3-204ENST00000423670 SEC24BO95487 1268 aa11.64□□□□□ -0.55
SCYL3-204ENST00000423670 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
SCYL3-204ENST00000423670 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
SCYL3-204ENST00000423670 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
SCYL3-204ENST00000423670 CAMTA1Q9Y6Y1 1673 aa11.64□□□□□ -0.55
SCYL3-204ENST00000423670 VIRMAQ69YN4 1812 aaKnown RBP11.63□□□□□ -0.55
SCYL3-204ENST00000423670 ANP32EQ9BTT0 268 aa11.63□□□□□ -0.55
SCYL3-204ENST00000423670 COL18A1P39060 1754 aa11.62□□□□□ -0.55
SCYL3-204ENST00000423670 HAP1P54257 671 aaPredicted RBP11.62□□□□□ -0.55
SCYL3-204ENST00000423670 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
SCYL3-204ENST00000423670 PTPRCP08575 1304 aa11.62□□□□□ -0.55
SCYL3-204ENST00000423670 ERBB3P21860 1342 aa11.62□□□□□ -0.55
SCYL3-204ENST00000423670 ZNF335Q9H4Z2 1342 aaPredicted RBP11.62□□□□□ -0.55
SCYL3-204ENST00000423670 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
SCYL3-204ENST00000423670 KCNQ3O43525 872 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 NUCB1Q02818 461 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 NPHP3Q7Z494 1330 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 TNS3Q68CZ2 1445 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 FAM208AQ9UK61 1670 aaKnown RBP11.61□□□□□ -0.55
SCYL3-204ENST00000423670 F6X3S4 739 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 ZNF530Q6P9A1 599 aaPredicted RBP11.61□□□□□ -0.55
SCYL3-204ENST00000423670 MPRIPQ6WCQ1 1025 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
SCYL3-204ENST00000423670 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
SCYL3-204ENST00000423670 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
SCYL3-204ENST00000423670 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
SCYL3-204ENST00000423670 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
SCYL3-204ENST00000423670 ATP10DQ9P241 1426 aa11.59□□□□□ -0.55
SCYL3-204ENST00000423670 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
SCYL3-204ENST00000423670 CHRNA2Q15822 529 aa11.59□□□□□ -0.55
SCYL3-204ENST00000423670 MEIS3Q99687 375 aa11.59□□□□□ -0.55
SCYL3-204ENST00000423670 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
SCYL3-204ENST00000423670 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
SCYL3-204ENST00000423670 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
SCYL3-204ENST00000423670 CHMP4BQ9H444 224 aaKnown RBP11.58□□□□□ -0.56
SCYL3-204ENST00000423670 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
SCYL3-204ENST00000423670 FLIIQ13045 1269 aa11.58□□□□□ -0.56
SCYL3-204ENST00000423670 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms