RNA–Protein interactions for RNA: ENST00000423616.1

RHBDD1-204, Transcript of rhomboid domain containing 1, humanhuman

TSL 5

Gene RHBDD1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-204ENST00000423616 ANKRD36BQ8N2N9 1353 aa13.92□□□□□ -0.18
RHBDD1-204ENST00000423616 ERBB3P21860 1342 aa13.91□□□□□ -0.18
RHBDD1-204ENST00000423616 KIAA1210Q9ULL0 1709 aa13.91□□□□□ -0.18
RHBDD1-204ENST00000423616 DCAF11Q8TEB1 546 aa13.9□□□□□ -0.18
RHBDD1-204ENST00000423616 NLRP2Q9NX02 1062 aa13.9□□□□□ -0.18
RHBDD1-204ENST00000423616 PLEKHG2Q9H7P9 1386 aa13.9□□□□□ -0.18
RHBDD1-204ENST00000423616 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
RHBDD1-204ENST00000423616 USP54Q70EL1 1684 aa13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 HSPA1AP0DMV8 641 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 HSPA1BP0DMV9 641 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 KDM2AQ9Y2K7 1162 aa13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 C10orf71Q711Q0 1435 aa13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 TTC21AQ8NDW8 1320 aa13.89□□□□□ -0.19
RHBDD1-204ENST00000423616 SOX12O15370 315 aa13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 KCNQ4P56696 695 aa13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 HTRA3P83110 453 aa13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 LTN1O94822 1766 aa13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
RHBDD1-204ENST00000423616 USP47Q96K76 1375 aa13.87□□□□□ -0.19
RHBDD1-204ENST00000423616 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
RHBDD1-204ENST00000423616 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
RHBDD1-204ENST00000423616 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
RHBDD1-204ENST00000423616 CABP2Q9NPB3 220 aa13.86□□□□□ -0.19
RHBDD1-204ENST00000423616 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
RHBDD1-204ENST00000423616 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
RHBDD1-204ENST00000423616 NSD2O96028 1365 aa13.85□□□□□ -0.19
RHBDD1-204ENST00000423616 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
RHBDD1-204ENST00000423616 PRIM1P49642 420 aaKnown RBP13.85□□□□□ -0.19
RHBDD1-204ENST00000423616 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
RHBDD1-204ENST00000423616 DDX54Q8TDD1 881 aaKnown RBP13.84□□□□□ -0.19
RHBDD1-204ENST00000423616 KIF13BQ9NQT8 1826 aa13.84□□□□□ -0.19
RHBDD1-204ENST00000423616 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
RHBDD1-204ENST00000423616 SMC1BQ8NDV3 1235 aa13.83□□□□□ -0.2
RHBDD1-204ENST00000423616 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
RHBDD1-204ENST00000423616 C4BP0C0L5 1744 aa13.81□□□□□ -0.2
RHBDD1-204ENST00000423616 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
RHBDD1-204ENST00000423616 UBR3Q6ZT12 1888 aa13.81□□□□□ -0.2
RHBDD1-204ENST00000423616 KIAA1551Q9HCM1 1747 aa13.79□□□□□ -0.2
RHBDD1-204ENST00000423616 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
RHBDD1-204ENST00000423616 ARFGEF1Q9Y6D6 1849 aa13.79□□□□□ -0.2
RHBDD1-204ENST00000423616 AK7Q96M32 723 aa13.79□□□□□ -0.2
RHBDD1-204ENST00000423616 BCS1LQ9Y276 419 aa13.79□□□□□ -0.2
RHBDD1-204ENST00000423616 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
RHBDD1-204ENST00000423616 TGFB2P61812 414 aa13.78□□□□□ -0.2
RHBDD1-204ENST00000423616 ARHGAP27Q6ZUM4 889 aa13.78□□□□□ -0.2
RHBDD1-204ENST00000423616 KCPQ6ZWJ8 1503 aa13.78□□□□□ -0.2
RHBDD1-204ENST00000423616 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
RHBDD1-204ENST00000423616 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
RHBDD1-204ENST00000423616 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
RHBDD1-204ENST00000423616 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
RHBDD1-204ENST00000423616 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
RHBDD1-204ENST00000423616 SSFA2P28290 1259 aa13.76□□□□□ -0.21
RHBDD1-204ENST00000423616 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
RHBDD1-204ENST00000423616 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
RHBDD1-204ENST00000423616 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
RHBDD1-204ENST00000423616 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
RHBDD1-204ENST00000423616 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
RHBDD1-204ENST00000423616 ZC3H4Q9UPT8 1303 aaKnown RBP13.74□□□□□ -0.21
RHBDD1-204ENST00000423616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.74□□□□□ -0.21
RHBDD1-204ENST00000423616 FAM161AQ3B820 660 aa13.74□□□□□ -0.21
RHBDD1-204ENST00000423616 FCHSD2O94868 740 aa13.73□□□□□ -0.21
RHBDD1-204ENST00000423616 PHF14O94880 888 aa13.73□□□□□ -0.21
RHBDD1-204ENST00000423616 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
RHBDD1-204ENST00000423616 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
RHBDD1-204ENST00000423616 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
RHBDD1-204ENST00000423616 MMP10P09238 476 aa13.7□□□□□ -0.22
RHBDD1-204ENST00000423616 RNF181Q9P0P0 153 aa13.7□□□□□ -0.22
RHBDD1-204ENST00000423616 SBF1O95248 1867 aa13.7□□□□□ -0.22
RHBDD1-204ENST00000423616 MEGF6O75095 1541 aa13.69□□□□□ -0.22
RHBDD1-204ENST00000423616 A0A0G2JLW4 131 aa13.69□□□□□ -0.22
RHBDD1-204ENST00000423616 IP6K1Q92551 441 aa13.69□□□□□ -0.22
RHBDD1-204ENST00000423616 AIDAQ96BJ3 306 aa13.69□□□□□ -0.22
RHBDD1-204ENST00000423616 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
RHBDD1-204ENST00000423616 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
RHBDD1-204ENST00000423616 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
RHBDD1-204ENST00000423616 MLLT1Q03111 559 aaPredicted RBP13.68□□□□□ -0.22
RHBDD1-204ENST00000423616 CCDC87Q9NVE4 849 aa13.68□□□□□ -0.22
RHBDD1-204ENST00000423616 ITGB4P16144 1822 aa13.67□□□□□ -0.22
RHBDD1-204ENST00000423616 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
RHBDD1-204ENST00000423616 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
RHBDD1-204ENST00000423616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
RHBDD1-204ENST00000423616 PCDH11XQ9BZA7 1347 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 PCDH11YQ9BZA8 1340 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 FOXN1O15353 648 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 DPEP1P16444 411 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
RHBDD1-204ENST00000423616 MAP2P11137 1827 aaKnown RBP13.65□□□□□ -0.22
RHBDD1-204ENST00000423616 NME9Q86XW9 330 aa13.65□□□□□ -0.22
RHBDD1-204ENST00000423616 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
RHBDD1-204ENST00000423616 PIM2Q9P1W9 311 aa13.65□□□□□ -0.22
RHBDD1-204ENST00000423616 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
RHBDD1-204ENST00000423616 SBNO2Q9Y2G9 1366 aa13.64□□□□□ -0.23
RHBDD1-204ENST00000423616 GNPATO15228 680 aa13.64□□□□□ -0.23
RHBDD1-204ENST00000423616 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms