RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
HDLBP-209ENST00000422933 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
HDLBP-209ENST00000422933 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-209ENST00000422933 LRP5O75197 1615 aa13.23□□□□□ -0.29
HDLBP-209ENST00000422933 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-209ENST00000422933 DDB1Q16531 1140 aa13.22□□□□□ -0.29
HDLBP-209ENST00000422933 PARP4Q9UKK3 1724 aaKnown RBP13.22□□□□□ -0.29
HDLBP-209ENST00000422933 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
HDLBP-209ENST00000422933 SEPT12Q8IYM1 358 aa13.2□□□□□ -0.3
HDLBP-209ENST00000422933 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
HDLBP-209ENST00000422933 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
HDLBP-209ENST00000422933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.31e-15■□□□□ 10.1
HDLBP-209ENST00000422933 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
HDLBP-209ENST00000422933 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-209ENST00000422933 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
HDLBP-209ENST00000422933 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
HDLBP-209ENST00000422933 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
HDLBP-209ENST00000422933 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
HDLBP-209ENST00000422933 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
HDLBP-209ENST00000422933 KDRP35968 1356 aa13.19□□□□□ -0.3
HDLBP-209ENST00000422933 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
HDLBP-209ENST00000422933 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
HDLBP-209ENST00000422933 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
HDLBP-209ENST00000422933 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
HDLBP-209ENST00000422933 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
HDLBP-209ENST00000422933 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
HDLBP-209ENST00000422933 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
HDLBP-209ENST00000422933 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
HDLBP-209ENST00000422933 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
HDLBP-209ENST00000422933 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
HDLBP-209ENST00000422933 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
HDLBP-209ENST00000422933 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
HDLBP-209ENST00000422933 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
HDLBP-209ENST00000422933 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
HDLBP-209ENST00000422933 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-209ENST00000422933 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
HDLBP-209ENST00000422933 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
HDLBP-209ENST00000422933 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
HDLBP-209ENST00000422933 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
HDLBP-209ENST00000422933 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
HDLBP-209ENST00000422933 TNS2Q63HR2 1409 aa13.14□□□□□ -0.31
HDLBP-209ENST00000422933 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
HDLBP-209ENST00000422933 MEGF6O75095 1541 aa13.13□□□□□ -0.31
HDLBP-209ENST00000422933 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
HDLBP-209ENST00000422933 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
HDLBP-209ENST00000422933 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-209ENST00000422933 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
HDLBP-209ENST00000422933 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
HDLBP-209ENST00000422933 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
HDLBP-209ENST00000422933 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
HDLBP-209ENST00000422933 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
HDLBP-209ENST00000422933 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
HDLBP-209ENST00000422933 PHKG2P15735 406 aa13.11□□□□□ -0.31
HDLBP-209ENST00000422933 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
HDLBP-209ENST00000422933 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
HDLBP-209ENST00000422933 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
HDLBP-209ENST00000422933 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
HDLBP-209ENST00000422933 RIPK4P57078 832 aa13.1□□□□□ -0.31
HDLBP-209ENST00000422933 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
HDLBP-209ENST00000422933 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
HDLBP-209ENST00000422933 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
HDLBP-209ENST00000422933 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
HDLBP-209ENST00000422933 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
HDLBP-209ENST00000422933 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
HDLBP-209ENST00000422933 TEFQ10587 303 aa13.09□□□□□ -0.31
HDLBP-209ENST00000422933 APAF1O14727 1248 aa13.08□□□□□ -0.32
HDLBP-209ENST00000422933 CYP27B1O15528 508 aa13.08□□□□□ -0.32
HDLBP-209ENST00000422933 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
HDLBP-209ENST00000422933 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-209ENST00000422933 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-209ENST00000422933 ERVV-2B6SEH9 535 aa13.07□□□□□ -0.32
HDLBP-209ENST00000422933 CABP4P57796 275 aa13.07□□□□□ -0.32
HDLBP-209ENST00000422933 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-209ENST00000422933 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
HDLBP-209ENST00000422933 RREB1Q92766 1687 aa13.07□□□□□ -0.32
HDLBP-209ENST00000422933 NUP188Q5SRE5 1749 aa13.06□□□□□ -0.32
HDLBP-209ENST00000422933 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-209ENST00000422933 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
HDLBP-209ENST00000422933 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
HDLBP-209ENST00000422933 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
HDLBP-209ENST00000422933 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
HDLBP-209ENST00000422933 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
HDLBP-209ENST00000422933 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
HDLBP-209ENST00000422933 RRP7AQ9Y3A4 280 aaKnown RBP13.05□□□□□ -0.32
HDLBP-209ENST00000422933 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
HDLBP-209ENST00000422933 ACSBG1Q96GR2 724 aa13.04□□□□□ -0.32
HDLBP-209ENST00000422933 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
HDLBP-209ENST00000422933 BCL9O00512 1426 aa13.04□□□□□ -0.32
HDLBP-209ENST00000422933 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
HDLBP-209ENST00000422933 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
HDLBP-209ENST00000422933 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-209ENST00000422933 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-209ENST00000422933 HNRNPUQ00839 825 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDLBP-209ENST00000422933 MCM10Q7L590 875 aa13.02□□□□□ -0.33
HDLBP-209ENST00000422933 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
HDLBP-209ENST00000422933 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-209ENST00000422933 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
HDLBP-209ENST00000422933 TRIM37O94972 964 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 BAG6P46379 1132 aa13.01□□□□□ -0.33
HDLBP-209ENST00000422933 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms