RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
HERC3-204ENST00000422770 ZCRB1Q8TBF4 217 aaKnown RBP13.09□□□□□ -0.31
HERC3-204ENST00000422770 BTAF1O14981 1849 aa13.09□□□□□ -0.31
HERC3-204ENST00000422770 MTHFSP49914 203 aa13.08□□□□□ -0.32
HERC3-204ENST00000422770 EYA1Q99502 592 aa13.08□□□□□ -0.32
HERC3-204ENST00000422770 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
HERC3-204ENST00000422770 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
HERC3-204ENST00000422770 RREB1Q92766 1687 aa13.06□□□□□ -0.32
HERC3-204ENST00000422770 NUP188Q5SRE5 1749 aa13.06□□□□□ -0.32
HERC3-204ENST00000422770 DDX10Q13206 875 aaKnown RBP13.06□□□□□ -0.32
HERC3-204ENST00000422770 EZH2Q15910 746 aaKnown RBP13.06□□□□□ -0.32
HERC3-204ENST00000422770 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
HERC3-204ENST00000422770 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
HERC3-204ENST00000422770 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
HERC3-204ENST00000422770 RGPD4Q7Z3J3 1758 aa13.05□□□□□ -0.32
HERC3-204ENST00000422770 ITGB4P16144 1822 aa13.04□□□□□ -0.32
HERC3-204ENST00000422770 KCNQ2O43526 872 aa13.04□□□□□ -0.32
HERC3-204ENST00000422770 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
HERC3-204ENST00000422770 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
HERC3-204ENST00000422770 SPG7Q9UQ90 795 aa13.04□□□□□ -0.32
HERC3-204ENST00000422770 SRCAPQ6ZRS2 3230 aa13.04□□□□□ -0.32
HERC3-204ENST00000422770 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
HERC3-204ENST00000422770 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
HERC3-204ENST00000422770 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
HERC3-204ENST00000422770 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
HERC3-204ENST00000422770 IGSF1Q8N6C5 1336 aa13.03□□□□□ -0.32
HERC3-204ENST00000422770 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.32
HERC3-204ENST00000422770 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
HERC3-204ENST00000422770 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
HERC3-204ENST00000422770 BCL9O00512 1426 aa13.02□□□□□ -0.33
HERC3-204ENST00000422770 NCAPD2Q15021 1401 aa13.02□□□□□ -0.33
HERC3-204ENST00000422770 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
HERC3-204ENST00000422770 HMOX1P09601 288 aa13.01□□□□□ -0.33
HERC3-204ENST00000422770 PARD3Q8TEW0 1356 aa13□□□□□ -0.33
HERC3-204ENST00000422770 IL13P35225 146 aa13□□□□□ -0.33
HERC3-204ENST00000422770 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
HERC3-204ENST00000422770 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
HERC3-204ENST00000422770 CYP27B1O15528 508 aa12.99□□□□□ -0.33
HERC3-204ENST00000422770 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
HERC3-204ENST00000422770 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
HERC3-204ENST00000422770 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
HERC3-204ENST00000422770 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
HERC3-204ENST00000422770 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
HERC3-204ENST00000422770 NBPF14Q5TI25 921 aa12.98□□□□□ -0.33
HERC3-204ENST00000422770 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
HERC3-204ENST00000422770 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
HERC3-204ENST00000422770 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
HERC3-204ENST00000422770 MPRIPQ6WCQ1 1025 aa12.97□□□□□ -0.33
HERC3-204ENST00000422770 LY75O60449 1722 aa12.96□□□□□ -0.33
HERC3-204ENST00000422770 PLSCR1O15162 318 aa12.96□□□□□ -0.33
HERC3-204ENST00000422770 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
HERC3-204ENST00000422770 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
HERC3-204ENST00000422770 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
HERC3-204ENST00000422770 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
HERC3-204ENST00000422770 PHKG2P15735 406 aa12.95□□□□□ -0.34
HERC3-204ENST00000422770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
HERC3-204ENST00000422770 KDRP35968 1356 aa12.94□□□□□ -0.34
HERC3-204ENST00000422770 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
HERC3-204ENST00000422770 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
HERC3-204ENST00000422770 TMOD3Q9NYL9 352 aa12.94□□□□□ -0.34
HERC3-204ENST00000422770 C5P01031 1676 aa12.93□□□□□ -0.34
HERC3-204ENST00000422770 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
HERC3-204ENST00000422770 KCNQ4P56696 695 aa12.92□□□□□ -0.34
HERC3-204ENST00000422770 RALBP1Q15311 655 aa12.92□□□□□ -0.34
HERC3-204ENST00000422770 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
HERC3-204ENST00000422770 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
HERC3-204ENST00000422770 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
HERC3-204ENST00000422770 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
HERC3-204ENST00000422770 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
HERC3-204ENST00000422770 CCNL1Q9UK58 526 aaPredicted RBP12.91□□□□□ -0.34
HERC3-204ENST00000422770 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
HERC3-204ENST00000422770 MYBBP1AQ9BQG0 1328 aaKnown RBP12.9□□□□□ -0.34
HERC3-204ENST00000422770 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
HERC3-204ENST00000422770 CABP4P57796 275 aa12.9□□□□□ -0.34
HERC3-204ENST00000422770 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
HERC3-204ENST00000422770 PROM2Q8N271 834 aa12.9□□□□□ -0.34
HERC3-204ENST00000422770 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
HERC3-204ENST00000422770 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
HERC3-204ENST00000422770 PAPPAQ13219 1627 aa12.89□□□□□ -0.35
HERC3-204ENST00000422770 NEFMP07197 916 aa12.89□□□□□ -0.35
HERC3-204ENST00000422770 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
HERC3-204ENST00000422770 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
HERC3-204ENST00000422770 PIGBQ92521 554 aa12.89□□□□□ -0.35
HERC3-204ENST00000422770 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
HERC3-204ENST00000422770 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
HERC3-204ENST00000422770 SLC27A3Q5K4L6 730 aa12.88□□□□□ -0.35
HERC3-204ENST00000422770 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
HERC3-204ENST00000422770 CASZ1Q86V15 1759 aa12.87□□□□□ -0.35
HERC3-204ENST00000422770 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
HERC3-204ENST00000422770 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
HERC3-204ENST00000422770 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
HERC3-204ENST00000422770 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
HERC3-204ENST00000422770 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
HERC3-204ENST00000422770 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
HERC3-204ENST00000422770 C4BP0C0L5 1744 aa12.86□□□□□ -0.35
HERC3-204ENST00000422770 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
HERC3-204ENST00000422770 MSH5O43196 834 aa12.86□□□□□ -0.35
HERC3-204ENST00000422770 ANP32CO43423 234 aa12.86□□□□□ -0.35
HERC3-204ENST00000422770 SLC15A2Q16348 729 aa12.86□□□□□ -0.35
HERC3-204ENST00000422770 LRP5O75197 1615 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms