RNA–Protein interactions for RNA: ENST00000422221.1

CLIC4P3-201, Transcript of chloride intracellular channel 4 pseudogene 3, humanhuman

BASIC

Gene CLIC4P3, Length 752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P3-201ENST00000422221 ADGRB2O60241 1585 aa11.05□□□□□ -0.64
CLIC4P3-201ENST00000422221 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
CLIC4P3-201ENST00000422221 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
CLIC4P3-201ENST00000422221 PBX2P40425 430 aa11.04□□□□□ -0.64
CLIC4P3-201ENST00000422221 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
CLIC4P3-201ENST00000422221 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
CLIC4P3-201ENST00000422221 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
CLIC4P3-201ENST00000422221 DISP2A7MBM2 1401 aa11.03□□□□□ -0.64
CLIC4P3-201ENST00000422221 STK25O00506 426 aa11.03□□□□□ -0.64
CLIC4P3-201ENST00000422221 TRIM37O94972 964 aa11.03□□□□□ -0.64
CLIC4P3-201ENST00000422221 PRDM11Q9NQV5 511 aa11.03□□□□□ -0.64
CLIC4P3-201ENST00000422221 THSD7AQ9UPZ6 1657 aa11.03□□□□□ -0.64
CLIC4P3-201ENST00000422221 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
CLIC4P3-201ENST00000422221 ZC3H6P61129 1189 aaKnown RBP11.02□□□□□ -0.65
CLIC4P3-201ENST00000422221 DCAF11Q8TEB1 546 aa11.02□□□□□ -0.65
CLIC4P3-201ENST00000422221 NUDT16Q96DE0 195 aaKnown RBP11.02□□□□□ -0.65
CLIC4P3-201ENST00000422221 TULP4Q9NRJ4 1543 aa11.02□□□□□ -0.65
CLIC4P3-201ENST00000422221 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 APBA3O96018 575 aa11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 NUTM2GQ5VZR2 741 aa11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 FAM196AQ6ZSG2 479 aa11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 EIF3AQ14152 1382 aaKnown RBP11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
CLIC4P3-201ENST00000422221 NBPF8Q3BBV2 869 aa11□□□□□ -0.65
CLIC4P3-201ENST00000422221 CDK19Q9BWU1 502 aa11□□□□□ -0.65
CLIC4P3-201ENST00000422221 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
CLIC4P3-201ENST00000422221 PPP1R37O75864 691 aa10.99□□□□□ -0.65
CLIC4P3-201ENST00000422221 BARGINQ6ZT62 677 aa10.99□□□□□ -0.65
CLIC4P3-201ENST00000422221 USP35Q9P2H5 1018 aa10.99□□□□□ -0.65
CLIC4P3-201ENST00000422221 LARP1Q6PKG0 1096 aaKnown RBP10.98□□□□□ -0.65
CLIC4P3-201ENST00000422221 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
CLIC4P3-201ENST00000422221 ATP7BP35670 1465 aa10.98□□□□□ -0.65
CLIC4P3-201ENST00000422221 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
CLIC4P3-201ENST00000422221 EVA1CP58658 441 aa10.97□□□□□ -0.65
CLIC4P3-201ENST00000422221 ACEP12821 1306 aa10.97□□□□□ -0.65
CLIC4P3-201ENST00000422221 CAMTA1Q9Y6Y1 1673 aa10.97□□□□□ -0.65
CLIC4P3-201ENST00000422221 SSH2Q76I76 1423 aa10.96□□□□□ -0.65
CLIC4P3-201ENST00000422221 POLR3AO14802 1390 aaPredicted RBP10.96□□□□□ -0.65
CLIC4P3-201ENST00000422221 RGL2O15211 777 aa10.96□□□□□ -0.65
CLIC4P3-201ENST00000422221 PDE3BQ13370 1112 aa10.96□□□□□ -0.65
CLIC4P3-201ENST00000422221 ADGRD1Q6QNK2 874 aa10.96□□□□□ -0.65
CLIC4P3-201ENST00000422221 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
CLIC4P3-201ENST00000422221 PARD3Q8TEW0 1356 aa10.95□□□□□ -0.66
CLIC4P3-201ENST00000422221 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
CLIC4P3-201ENST00000422221 ABTB2Q8N961 1025 aa10.95□□□□□ -0.66
CLIC4P3-201ENST00000422221 PLA2G2EQ9NZK7 142 aa10.95□□□□□ -0.66
CLIC4P3-201ENST00000422221 PHRF1Q9P1Y6 1649 aaKnown RBP10.95□□□□□ -0.66
CLIC4P3-201ENST00000422221 USP19O94966 1318 aa10.94□□□□□ -0.66
CLIC4P3-201ENST00000422221 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
CLIC4P3-201ENST00000422221 UTRNP46939 3433 aa10.94□□□□□ -0.66
CLIC4P3-201ENST00000422221 CPDO75976 1380 aa10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 ARHGEF28Q8N1W1 1705 aaKnown RBP10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 GCP02774 474 aa10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
CLIC4P3-201ENST00000422221 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
CLIC4P3-201ENST00000422221 HRO43593 1189 aa10.92□□□□□ -0.66
CLIC4P3-201ENST00000422221 PTF1AQ7RTS3 328 aa10.92□□□□□ -0.66
CLIC4P3-201ENST00000422221 THRAP3Q9Y2W1 955 aaKnown RBP10.92□□□□□ -0.66
CLIC4P3-201ENST00000422221 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
CLIC4P3-201ENST00000422221 RREB1Q92766 1687 aa10.92□□□□□ -0.66
CLIC4P3-201ENST00000422221 KCNQ2O43526 872 aa10.91□□□□□ -0.66
CLIC4P3-201ENST00000422221 YY1P25490 414 aa10.91□□□□□ -0.66
CLIC4P3-201ENST00000422221 NLRP13Q86W25 1043 aa10.91□□□□□ -0.66
CLIC4P3-201ENST00000422221 HCSTQ9UBK5 93 aa10.91□□□□□ -0.66
CLIC4P3-201ENST00000422221 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
CLIC4P3-201ENST00000422221 NRKQ7Z2Y5 1582 aa10.9□□□□□ -0.66
CLIC4P3-201ENST00000422221 NUP188Q5SRE5 1749 aa10.9□□□□□ -0.66
CLIC4P3-201ENST00000422221 PSEN2P49810 448 aa10.9□□□□□ -0.66
CLIC4P3-201ENST00000422221 SPON1Q9HCB6 807 aa10.9□□□□□ -0.66
CLIC4P3-201ENST00000422221 TOPAZ1Q8N9V7 1692 aa10.89□□□□□ -0.67
CLIC4P3-201ENST00000422221 COL5A2P05997 1499 aaPredicted RBP10.89□□□□□ -0.67
CLIC4P3-201ENST00000422221 PLSCR1O15162 318 aa10.89□□□□□ -0.67
CLIC4P3-201ENST00000422221 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
CLIC4P3-201ENST00000422221 PDGFDQ9GZP0 370 aaPredicted RBP10.89□□□□□ -0.67
CLIC4P3-201ENST00000422221 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
CLIC4P3-201ENST00000422221 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
CLIC4P3-201ENST00000422221 CRB1P82279 1406 aa10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 PPIP5K1Q6PFW1 1433 aa10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 MARCH10Q8NA82 808 aaPredicted RBP10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 PPP1R1BQ9UD71 204 aaPredicted RBP10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 AATKQ6ZMQ8 1374 aa10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 PEAK1Q9H792 1746 aa10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 PARP4Q9UKK3 1724 aaKnown RBP10.87□□□□□ -0.67
CLIC4P3-201ENST00000422221 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
CLIC4P3-201ENST00000422221 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
CLIC4P3-201ENST00000422221 TK2O00142 265 aa10.86□□□□□ -0.67
CLIC4P3-201ENST00000422221 DDB1Q16531 1140 aa10.86□□□□□ -0.67
CLIC4P3-201ENST00000422221 BRD4O60885 1362 aaPredicted RBP10.85□□□□□ -0.67
CLIC4P3-201ENST00000422221 CENPJQ9HC77 1338 aaPredicted RBP10.84□□□□□ -0.67
CLIC4P3-201ENST00000422221 OVOS2A0A0G2JMS6 1433 aa10.84□□□□□ -0.67
CLIC4P3-201ENST00000422221 OVOS2A0A0J9YW53 1432 aa10.84□□□□□ -0.67
CLIC4P3-201ENST00000422221 OVOS2Q6IE36 1432 aa10.84□□□□□ -0.67
CLIC4P3-201ENST00000422221 TOM1L2Q6ZVM7 507 aa10.84□□□□□ -0.67
CLIC4P3-201ENST00000422221 NINLQ9Y2I6 1382 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms