RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 OVOS2A0A0G2JMS6 1433 aa21.16■□□□□ 0.98
BRAT1-202ENST00000421712 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
BRAT1-202ENST00000421712 EP400Q96L91 3159 aa21.14■□□□□ 0.98
BRAT1-202ENST00000421712 HMOX1P09601 288 aa21.14■□□□□ 0.97
BRAT1-202ENST00000421712 AEBP1Q8IUX7 1158 aa21.14■□□□□ 0.97
BRAT1-202ENST00000421712 NUDCQ9Y266 331 aa21.14■□□□□ 0.97
BRAT1-202ENST00000421712 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.97
BRAT1-202ENST00000421712 ACSBG1Q96GR2 724 aa21.12■□□□□ 0.97
BRAT1-202ENST00000421712 NCAPD2Q15021 1401 aa21.12■□□□□ 0.97
BRAT1-202ENST00000421712 PCDH11XQ9BZA7 1347 aa21.11■□□□□ 0.97
BRAT1-202ENST00000421712 PCDH11YQ9BZA8 1340 aa21.11■□□□□ 0.97
BRAT1-202ENST00000421712 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
BRAT1-202ENST00000421712 APBA3O96018 575 aa21.1■□□□□ 0.97
BRAT1-202ENST00000421712 BAG6P46379 1132 aa21.1■□□□□ 0.97
BRAT1-202ENST00000421712 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
BRAT1-202ENST00000421712 DEFB132Q7Z7B7 95 aa21.09■□□□□ 0.97
BRAT1-202ENST00000421712 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
BRAT1-202ENST00000421712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.09■□□□□ 0.97
BRAT1-202ENST00000421712 U2AF1L5P0DN76 240 aaPredicted RBP21.08■□□□□ 0.97
BRAT1-202ENST00000421712 U2AF1Q01081 240 aaKnown RBP eCLIP21.08■□□□□ 0.97
BRAT1-202ENST00000421712 SYTL4Q96C24 671 aaPredicted RBP21.08■□□□□ 0.97
BRAT1-202ENST00000421712 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
BRAT1-202ENST00000421712 AMOTQ4VCS5 1084 aa21.07■□□□□ 0.96
BRAT1-202ENST00000421712 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
BRAT1-202ENST00000421712 CYP27B1O15528 508 aa21.06■□□□□ 0.96
BRAT1-202ENST00000421712 ANP32CO43423 234 aa21.06■□□□□ 0.96
BRAT1-202ENST00000421712 KCNQ2O43526 872 aa21.06■□□□□ 0.96
BRAT1-202ENST00000421712 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
BRAT1-202ENST00000421712 BCL9O00512 1426 aa21.05■□□□□ 0.96
BRAT1-202ENST00000421712 RGPD1P0DJD0 1748 aa21.05■□□□□ 0.96
BRAT1-202ENST00000421712 EN1Q05925 392 aaPredicted RBP21.05■□□□□ 0.96
BRAT1-202ENST00000421712 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
BRAT1-202ENST00000421712 KDRP35968 1356 aa21.05■□□□□ 0.96
BRAT1-202ENST00000421712 PRIM1P49642 420 aaKnown RBP21.04■□□□□ 0.96
BRAT1-202ENST00000421712 C1orf141Q5JVX7 400 aa21.04■□□□□ 0.96
BRAT1-202ENST00000421712 PTF1AQ7RTS3 328 aa21.04■□□□□ 0.96
BRAT1-202ENST00000421712 SBF2Q86WG5 1849 aa21.03■□□□□ 0.96
BRAT1-202ENST00000421712 SHANK3Q9BYB0 1731 aa21.02■□□□□ 0.96
BRAT1-202ENST00000421712 PHKG2P15735 406 aa21.02■□□□□ 0.96
BRAT1-202ENST00000421712 PKD1L3Q7Z443 1732 aa21.01■□□□□ 0.95
BRAT1-202ENST00000421712 PLEKHG2Q9H7P9 1386 aa21■□□□□ 0.95
BRAT1-202ENST00000421712 HSP90AB1P08238 724 aaKnown RBP21■□□□□ 0.95
BRAT1-202ENST00000421712 PRKAR2BP31323 418 aa21■□□□□ 0.95
BRAT1-202ENST00000421712 FCHSD2O94868 740 aa20.99■□□□□ 0.95
BRAT1-202ENST00000421712 EZH2Q15910 746 aaKnown RBP20.99■□□□□ 0.95
BRAT1-202ENST00000421712 NEFMP07197 916 aa20.98■□□□□ 0.95
BRAT1-202ENST00000421712 NKX1-1Q15270 411 aaPredicted RBP20.98■□□□□ 0.95
BRAT1-202ENST00000421712 MPRIPQ6WCQ1 1025 aa20.98■□□□□ 0.95
BRAT1-202ENST00000421712 RSPH6AQ9H0K4 717 aa20.98■□□□□ 0.95
BRAT1-202ENST00000421712 TNS1Q9HBL0 1735 aaKnown RBP20.98■□□□□ 0.95
BRAT1-202ENST00000421712 MTHFSDQ2M296 383 aaKnown RBP20.97■□□□□ 0.95
BRAT1-202ENST00000421712 PLSCR1O15162 318 aa20.96■□□□□ 0.95
BRAT1-202ENST00000421712 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
BRAT1-202ENST00000421712 AKAP4Q5JQC9 854 aa20.96■□□□□ 0.95
BRAT1-202ENST00000421712 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
BRAT1-202ENST00000421712 CAMKK2Q96RR4 588 aa20.96■□□□□ 0.95
BRAT1-202ENST00000421712 PNNQ9H307 717 aaKnown RBP20.96■□□□□ 0.95
BRAT1-202ENST00000421712 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
BRAT1-202ENST00000421712 NHSQ6T4R5 1651 aa20.95■□□□□ 0.94
BRAT1-202ENST00000421712 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
BRAT1-202ENST00000421712 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
BRAT1-202ENST00000421712 TMOD3Q9NYL9 352 aa20.94■□□□□ 0.94
BRAT1-202ENST00000421712 CABP4P57796 275 aa20.92■□□□□ 0.94
BRAT1-202ENST00000421712 ERVV-2B6SEH9 535 aa20.91■□□□□ 0.94
BRAT1-202ENST00000421712 BTAF1O14981 1849 aa20.91■□□□□ 0.94
BRAT1-202ENST00000421712 MAPK8IP3Q9UPT6 1336 aa20.9■□□□□ 0.94
BRAT1-202ENST00000421712 PIGBQ92521 554 aa20.9■□□□□ 0.94
BRAT1-202ENST00000421712 GNAT3A8MTJ3 354 aa20.89■□□□□ 0.93
BRAT1-202ENST00000421712 TXNRD1Q16881 649 aa20.89■□□□□ 0.93
BRAT1-202ENST00000421712 LGR6Q9HBX8 967 aa20.89■□□□□ 0.93
BRAT1-202ENST00000421712 RNMTO43148 476 aaKnown RBP20.87■□□□□ 0.93
BRAT1-202ENST00000421712 NBPF14Q5TI25 921 aa20.87■□□□□ 0.93
BRAT1-202ENST00000421712 RTF1Q92541 710 aaKnown RBP20.87■□□□□ 0.93
BRAT1-202ENST00000421712 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
BRAT1-202ENST00000421712 MRS2Q9HD23 443 aa20.87■□□□□ 0.93
BRAT1-202ENST00000421712 ADAMTS8Q9UP79 889 aa20.87■□□□□ 0.93
BRAT1-202ENST00000421712 ITGB4P16144 1822 aa20.87■□□□□ 0.93
BRAT1-202ENST00000421712 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
BRAT1-202ENST00000421712 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 CCDC184Q52MB2 194 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 CCDC146Q8IYE0 955 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 PROM2Q8N271 834 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 NFATC2IPQ8NCF5 419 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 PLEKHF1Q96S99 279 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 TOGARAM1Q9Y4F4 1720 aa20.86■□□□□ 0.93
BRAT1-202ENST00000421712 ASAP1Q9ULH1 1129 aa20.85■□□□□ 0.93
BRAT1-202ENST00000421712 KCNQ4P56696 695 aa20.83■□□□□ 0.93
BRAT1-202ENST00000421712 TEFQ10587 303 aa20.83■□□□□ 0.93
BRAT1-202ENST00000421712 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
BRAT1-202ENST00000421712 PALLDQ8WX93 1383 aa20.83■□□□□ 0.92
BRAT1-202ENST00000421712 NFE2L2Q16236 605 aa20.82■□□□□ 0.92
BRAT1-202ENST00000421712 SLC27A3Q5K4L6 730 aa20.82■□□□□ 0.92
BRAT1-202ENST00000421712 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
BRAT1-202ENST00000421712 SLC52A2Q9HAB3 445 aa20.82■□□□□ 0.92
BRAT1-202ENST00000421712 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
BRAT1-202ENST00000421712 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
BRAT1-202ENST00000421712 RGPD3A6NKT7 1758 aaPredicted RBP20.81■□□□□ 0.92
BRAT1-202ENST00000421712 RGPD4Q7Z3J3 1758 aa20.81■□□□□ 0.92
BRAT1-202ENST00000421712 SCN11AQ9UI33 1791 aa20.81■□□□□ 0.92
BRAT1-202ENST00000421712 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms