RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
HDAC8-212ENST00000421523 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
HDAC8-212ENST00000421523 PDE4DIPQ5VU43 2346 aa8.37□□□□□ -1.07
HDAC8-212ENST00000421523 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
HDAC8-212ENST00000421523 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
HDAC8-212ENST00000421523 SOX12O15370 315 aa8.37□□□□□ -1.07
HDAC8-212ENST00000421523 C9orf131Q5VYM1 1079 aa8.37□□□□□ -1.07
HDAC8-212ENST00000421523 AIDAQ96BJ3 306 aa8.37□□□□□ -1.07
HDAC8-212ENST00000421523 CFAP44Q96MT7 982 aa8.37□□□□□ -1.07
HDAC8-212ENST00000421523 CCNL1Q9UK58 526 aaPredicted RBP8.37□□□□□ -1.07
HDAC8-212ENST00000421523 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
HDAC8-212ENST00000421523 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
HDAC8-212ENST00000421523 PLEKHG2Q9H7P9 1386 aa8.36□□□□□ -1.07
HDAC8-212ENST00000421523 SLIT3O75094 1523 aa8.36□□□□□ -1.07
HDAC8-212ENST00000421523 CTCFP49711 727 aaPredicted RBP8.36□□□□□ -1.07
HDAC8-212ENST00000421523 LBX1P52954 281 aa8.36□□□□□ -1.07
HDAC8-212ENST00000421523 LY75O60449 1722 aa8.36□□□□□ -1.07
HDAC8-212ENST00000421523 C10orf71Q711Q0 1435 aa8.36□□□□□ -1.07
HDAC8-212ENST00000421523 NLRP6P59044 892 aa8.35□□□□□ -1.07
HDAC8-212ENST00000421523 SMIM5Q71RC9 77 aa8.35□□□□□ -1.07
HDAC8-212ENST00000421523 ADGRB1O14514 1584 aa8.35□□□□□ -1.07
HDAC8-212ENST00000421523 PXDNLA1KZ92 1463 aa8.34□□□□□ -1.07
HDAC8-212ENST00000421523 MPHOSPH9Q99550 1183 aa8.34□□□□□ -1.07
HDAC8-212ENST00000421523 N4BP2Q86UW6 1770 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-212ENST00000421523 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
HDAC8-212ENST00000421523 C5P01031 1676 aa8.34□□□□□ -1.08
HDAC8-212ENST00000421523 USP54Q70EL1 1684 aa8.34□□□□□ -1.08
HDAC8-212ENST00000421523 IL2RBP14784 551 aa8.33□□□□□ -1.08
HDAC8-212ENST00000421523 RGS19P49795 217 aa8.33□□□□□ -1.08
HDAC8-212ENST00000421523 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
HDAC8-212ENST00000421523 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
HDAC8-212ENST00000421523 RNF181Q9P0P0 153 aa8.33□□□□□ -1.08
HDAC8-212ENST00000421523 QRICH2Q9H0J4 1663 aa8.33□□□□□ -1.08
HDAC8-212ENST00000421523 A0A0G2JLW4 131 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 FCHSD2O94868 740 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 PHF14O94880 888 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
HDAC8-212ENST00000421523 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 CCDC61Q9Y6R9 512 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 NSD2O96028 1365 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
HDAC8-212ENST00000421523 ERBB3P21860 1342 aa8.31□□□□□ -1.08
HDAC8-212ENST00000421523 ARHGEF25Q86VW2 580 aa8.31□□□□□ -1.08
HDAC8-212ENST00000421523 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
HDAC8-212ENST00000421523 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
HDAC8-212ENST00000421523 AMIGO3Q86WK7 504 aa8.3□□□□□ -1.08
HDAC8-212ENST00000421523 ANKRD36BQ8N2N9 1353 aa8.3□□□□□ -1.08
HDAC8-212ENST00000421523 HSPA8P11142 646 aaKnown RBP8.29□□□□□ -1.08
HDAC8-212ENST00000421523 FLAD1Q8NFF5 587 aa8.29□□□□□ -1.08
HDAC8-212ENST00000421523 CREBZFQ9NS37 354 aa8.29□□□□□ -1.08
HDAC8-212ENST00000421523 CNTNAP1P78357 1384 aa8.29□□□□□ -1.08
HDAC8-212ENST00000421523 USP47Q96K76 1375 aa8.29□□□□□ -1.08
HDAC8-212ENST00000421523 DPEP1P16444 411 aa8.28□□□□□ -1.08
HDAC8-212ENST00000421523 AK7Q96M32 723 aa8.28□□□□□ -1.08
HDAC8-212ENST00000421523 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
HDAC8-212ENST00000421523 C4BP0C0L5 1744 aa8.27□□□□□ -1.09
HDAC8-212ENST00000421523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.09
HDAC8-212ENST00000421523 MMP10P09238 476 aa8.27□□□□□ -1.09
HDAC8-212ENST00000421523 VEGFAP15692 232 aaPredicted RBP8.27□□□□□ -1.09
HDAC8-212ENST00000421523 VEGFBP49765 207 aa8.27□□□□□ -1.09
HDAC8-212ENST00000421523 TAF1LQ8IZX4 1826 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 A0A0C4DFX4 3053 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 BRCA1P38398 1863 aaKnown RBP8.26□□□□□ -1.09
HDAC8-212ENST00000421523 NFAT5O94916 1531 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 SRPK2P78362 688 aaKnown RBP8.26□□□□□ -1.09
HDAC8-212ENST00000421523 PPP4R3CPQ6ZMV5 832 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 WBP1LQ9NX94 342 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 ARFGEF1Q9Y6D6 1849 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 UBR3Q6ZT12 1888 aa8.26□□□□□ -1.09
HDAC8-212ENST00000421523 RAB3GAP2Q9H2M9 1393 aa8.25□□□□□ -1.09
HDAC8-212ENST00000421523 TGFB2P61812 414 aa8.25□□□□□ -1.09
HDAC8-212ENST00000421523 KCNH5Q8NCM2 988 aa8.25□□□□□ -1.09
HDAC8-212ENST00000421523 RASSF7Q02833 373 aa8.24□□□□□ -1.09
HDAC8-212ENST00000421523 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
HDAC8-212ENST00000421523 CABP2Q9NPB3 220 aa8.24□□□□□ -1.09
HDAC8-212ENST00000421523 SBF1O95248 1867 aa8.23□□□□□ -1.09
HDAC8-212ENST00000421523 PALLDQ8WX93 1383 aa8.23□□□□□ -1.09
HDAC8-212ENST00000421523 TIAM2Q8IVF5 1701 aa8.23□□□□□ -1.09
HDAC8-212ENST00000421523 DALRD3Q5D0E6 543 aaKnown RBP8.23□□□□□ -1.09
HDAC8-212ENST00000421523 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
HDAC8-212ENST00000421523 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
HDAC8-212ENST00000421523 VIRMAQ69YN4 1812 aaKnown RBP8.23□□□□□ -1.09
HDAC8-212ENST00000421523 NSD3Q9BZ95 1437 aa8.22□□□□□ -1.09
HDAC8-212ENST00000421523 GLTPD2A6NH11 291 aa8.22□□□□□ -1.09
HDAC8-212ENST00000421523 CABP1Q9NZU7 370 aa8.22□□□□□ -1.09
HDAC8-212ENST00000421523 KDM2AQ9Y2K7 1162 aa8.22□□□□□ -1.09
HDAC8-212ENST00000421523 LTN1O94822 1766 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 POTEIP0CG38 1075 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 POTEJP0CG39 1038 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 SSFA2P28290 1259 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 CHADLQ6NUI6 762 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 PIM2Q9P1W9 311 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 TSKSQ9UJT2 592 aa8.21□□□□□ -1.1
HDAC8-212ENST00000421523 GNPATO15228 680 aa8.2□□□□□ -1.1
HDAC8-212ENST00000421523 KCNA3P22001 575 aa8.2□□□□□ -1.1
HDAC8-212ENST00000421523 SOX10P56693 466 aa8.2□□□□□ -1.1
HDAC8-212ENST00000421523 LTV1Q96GA3 475 aaPredicted RBP8.2□□□□□ -1.1
HDAC8-212ENST00000421523 STAC3Q96MF2 364 aa8.2□□□□□ -1.1
HDAC8-212ENST00000421523 MCOLN1Q9GZU1 580 aa8.2□□□□□ -1.1
HDAC8-212ENST00000421523 CCDC87Q9NVE4 849 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms