RNA–Protein interactions for RNA: ENST00000421049.1

PAXBP1-203, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 3

Gene PAXBP1, Length 339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-203ENST00000421049 MAP7D1Q3KQU3 841 aa7.61□□□□□ -1.19
PAXBP1-203ENST00000421049 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
PAXBP1-203ENST00000421049 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
PAXBP1-203ENST00000421049 USP17L3A6NCW0 530 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 USP17L4A6NCW7 530 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 ARID3CA6NKF2 412 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 C11orf95C9JLR9 678 aaPredicted RBP7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 NCOA4Q13772 614 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 USP17L2Q6R6M4 530 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 TBC1D9Q6ZT07 1266 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 ERICH6Q7L0X2 663 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 USP17L1Q7RTZ2 530 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 KIFC2Q96AC6 838 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 SIRT1Q96EB6 747 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 ZNF395Q9H8N7 513 aaPredicted RBP7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 TIMELESSQ9UNS1 1208 aa7.6□□□□□ -1.19
PAXBP1-203ENST00000421049 MEN1O00255 615 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 ATP9BO43861 1147 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 USP4Q13107 963 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 TRIM47Q96LD4 638 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 ARHGEF10LQ9HCE6 1279 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 RAB6BQ9NRW1 208 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 CHIC2Q9UKJ5 165 aa7.59□□□□□ -1.19
PAXBP1-203ENST00000421049 PTGIRP43119 386 aa7.58□□□□□ -1.2
PAXBP1-203ENST00000421049 ZNF787Q6DD87 383 aa7.58□□□□□ -1.2
PAXBP1-203ENST00000421049 INSM2Q96T92 566 aaPredicted RBP7.58□□□□□ -1.2
PAXBP1-203ENST00000421049 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
PAXBP1-203ENST00000421049 POTECB2RU33 542 aa7.57□□□□□ -1.2
PAXBP1-203ENST00000421049 SPINT1O43278 529 aa7.57□□□□□ -1.2
PAXBP1-203ENST00000421049 PSME1Q06323 249 aa7.57□□□□□ -1.2
PAXBP1-203ENST00000421049 CCDC97Q96F63 343 aaPredicted RBP7.57□□□□□ -1.2
PAXBP1-203ENST00000421049 NOD1Q9Y239 953 aa7.57□□□□□ -1.2
PAXBP1-203ENST00000421049 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
PAXBP1-203ENST00000421049 MAN1A2O60476 641 aa7.56□□□□□ -1.2
PAXBP1-203ENST00000421049 SNRPBP14678 240 aaKnown RBP7.56□□□□□ -1.2
PAXBP1-203ENST00000421049 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
PAXBP1-203ENST00000421049 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
PAXBP1-203ENST00000421049 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
PAXBP1-203ENST00000421049 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
PAXBP1-203ENST00000421049 CTSOP43234 321 aaPredicted RBP7.55□□□□□ -1.2
PAXBP1-203ENST00000421049 GTF2IP78347 998 aa7.55□□□□□ -1.2
PAXBP1-203ENST00000421049 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
PAXBP1-203ENST00000421049 KDF1Q8NAX2 398 aaPredicted RBP7.55□□□□□ -1.2
PAXBP1-203ENST00000421049 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
PAXBP1-203ENST00000421049 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
PAXBP1-203ENST00000421049 LZTS3O60299 673 aaPredicted RBP7.54□□□□□ -1.2
PAXBP1-203ENST00000421049 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
PAXBP1-203ENST00000421049 GNRH1P01148 92 aa7.54□□□□□ -1.2
PAXBP1-203ENST00000421049 LMOD1P29536 600 aaPredicted RBP7.54□□□□□ -1.2
PAXBP1-203ENST00000421049 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
PAXBP1-203ENST00000421049 SOS2Q07890 1332 aaPredicted RBP7.53□□□□□ -1.2
PAXBP1-203ENST00000421049 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
PAXBP1-203ENST00000421049 CLN3Q13286 438 aa7.53□□□□□ -1.2
PAXBP1-203ENST00000421049 ESCO1Q5FWF5 840 aa7.53□□□□□ -1.2
PAXBP1-203ENST00000421049 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
PAXBP1-203ENST00000421049 GDF10P55107 478 aa7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 SLC27A3Q5K4L6 730 aa7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 FOXD4L5Q5VV16 416 aaPredicted RBP7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 RNF217Q8TC41 542 aa7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 ETNK1Q9HBU6 452 aa7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 MKRN1Q9UHC7 482 aaKnown RBP7.52□□□□□ -1.21
PAXBP1-203ENST00000421049 IL2RAP01589 272 aa7.51□□□□□ -1.21
PAXBP1-203ENST00000421049 RFX1P22670 979 aa7.51□□□□□ -1.21
PAXBP1-203ENST00000421049 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
PAXBP1-203ENST00000421049 CCDC82Q8N4S0 544 aa7.51□□□□□ -1.21
PAXBP1-203ENST00000421049 CNKSR1Q969H4 720 aa7.51□□□□□ -1.21
PAXBP1-203ENST00000421049 SUPT5HO00267 1087 aaKnown RBP7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 TLR1Q15399 786 aa7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 TPCN2Q8NHX9 752 aa7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 DNAAF2Q9NVR5 837 aaKnown RBP7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 SERPINA10Q9UK55 444 aa7.5□□□□□ -1.21
PAXBP1-203ENST00000421049 RASA1P20936 1047 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 SCNN1DP51172 638 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 ESYT1Q9BSJ8 1104 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 C1orf115Q9H7X2 142 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 RBM19Q9Y4C8 960 aaKnown RBP7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 PCDHGA11Q9Y5H2 935 aa7.49□□□□□ -1.21
PAXBP1-203ENST00000421049 GPC1P35052 558 aa7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 RNF144AP50876 292 aaPredicted RBP7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 CLDN10P78369 228 aa7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 PRICKLE2Q7Z3G6 844 aa7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 KIAA1024Q9UPX6 916 aa7.48□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L21D6R901 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
PAXBP1-203ENST00000421049 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms