RNA–Protein interactions for RNA: ENST00000420743.6

HNRNPC-202, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-202ENST00000420743 EYA1Q99502 592 aa16.32■□□□□ 0.2
HNRNPC-202ENST00000420743 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
HNRNPC-202ENST00000420743 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
HNRNPC-202ENST00000420743 BCL9O00512 1426 aa16.31■□□□□ 0.2
HNRNPC-202ENST00000420743 ZCRB1Q8TBF4 217 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-202ENST00000420743 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
HNRNPC-202ENST00000420743 RREB1Q92766 1687 aa16.3■□□□□ 0.2
HNRNPC-202ENST00000420743 NUP188Q5SRE5 1749 aa16.29■□□□□ 0.2
HNRNPC-202ENST00000420743 TATP17735 454 aaPredicted RBP16.29■□□□□ 0.2
HNRNPC-202ENST00000420743 DOT1LQ8TEK3 1739 aa16.27■□□□□ 0.2
HNRNPC-202ENST00000420743 R3HDM1Q15032 1099 aaKnown RBP16.27■□□□□ 0.2
HNRNPC-202ENST00000420743 NCAPD2Q15021 1401 aa16.27■□□□□ 0.19
HNRNPC-202ENST00000420743 BTAF1O14981 1849 aa16.27■□□□□ 0.19
HNRNPC-202ENST00000420743 PROM2Q8N271 834 aa16.26■□□□□ 0.19
HNRNPC-202ENST00000420743 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
HNRNPC-202ENST00000420743 PARD3Q8TEW0 1356 aa16.25■□□□□ 0.19
HNRNPC-202ENST00000420743 PLSCR1O15162 318 aa16.25■□□□□ 0.19
HNRNPC-202ENST00000420743 CYP27B1O15528 508 aa16.25■□□□□ 0.19
HNRNPC-202ENST00000420743 PRIM1P49642 420 aaKnown RBP16.25■□□□□ 0.19
HNRNPC-202ENST00000420743 MTHFSP49914 203 aa16.25■□□□□ 0.19
HNRNPC-202ENST00000420743 RGPD3A6NKT7 1758 aaPredicted RBP16.24■□□□□ 0.19
HNRNPC-202ENST00000420743 RGPD4Q7Z3J3 1758 aa16.24■□□□□ 0.19
HNRNPC-202ENST00000420743 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
HNRNPC-202ENST00000420743 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
HNRNPC-202ENST00000420743 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
HNRNPC-202ENST00000420743 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
HNRNPC-202ENST00000420743 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
HNRNPC-202ENST00000420743 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-202ENST00000420743 IL13P35225 146 aa16.21■□□□□ 0.19
HNRNPC-202ENST00000420743 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
HNRNPC-202ENST00000420743 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
HNRNPC-202ENST00000420743 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.18
HNRNPC-202ENST00000420743 KCNQ4P56696 695 aa16.2■□□□□ 0.18
HNRNPC-202ENST00000420743 SULT6B1Q6IMI4 303 aa16.19■□□□□ 0.18
HNRNPC-202ENST00000420743 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
HNRNPC-202ENST00000420743 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
HNRNPC-202ENST00000420743 HMOX1P09601 288 aa16.17■□□□□ 0.18
HNRNPC-202ENST00000420743 MPRIPQ6WCQ1 1025 aa16.17■□□□□ 0.18
HNRNPC-202ENST00000420743 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
HNRNPC-202ENST00000420743 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
HNRNPC-202ENST00000420743 ITGB4P16144 1822 aa16.16■□□□□ 0.18
HNRNPC-202ENST00000420743 PHKG2P15735 406 aa16.16■□□□□ 0.18
HNRNPC-202ENST00000420743 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
HNRNPC-202ENST00000420743 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
HNRNPC-202ENST00000420743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.174e-12■■■□□ 16.5
HNRNPC-202ENST00000420743 DDX10Q13206 875 aaKnown RBP16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 IFNL2Q8IZJ0 200 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 PAPPAQ13219 1627 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 KDRP35968 1356 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 LY75O60449 1722 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 PIGBQ92521 554 aa16.13■□□□□ 0.17
HNRNPC-202ENST00000420743 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
HNRNPC-202ENST00000420743 STK32BQ9NY57 414 aa16.12■□□□□ 0.17
HNRNPC-202ENST00000420743 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
HNRNPC-202ENST00000420743 KDM6AO15550 1401 aaPredicted RBP16.1■□□□□ 0.17
HNRNPC-202ENST00000420743 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
HNRNPC-202ENST00000420743 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
HNRNPC-202ENST00000420743 LRP5O75197 1615 aa16.1■□□□□ 0.17
HNRNPC-202ENST00000420743 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
HNRNPC-202ENST00000420743 AMOTQ4VCS5 1084 aa16.09■□□□□ 0.17
HNRNPC-202ENST00000420743 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
HNRNPC-202ENST00000420743 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
HNRNPC-202ENST00000420743 ASAP1Q9ULH1 1129 aa16.09■□□□□ 0.17
HNRNPC-202ENST00000420743 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
HNRNPC-202ENST00000420743 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
HNRNPC-202ENST00000420743 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
HNRNPC-202ENST00000420743 TUBGCP6Q96RT7 1819 aa16.07■□□□□ 0.16
HNRNPC-202ENST00000420743 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
HNRNPC-202ENST00000420743 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
HNRNPC-202ENST00000420743 DCAF5Q96JK2 942 aa16.06■□□□□ 0.16
HNRNPC-202ENST00000420743 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
HNRNPC-202ENST00000420743 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
HNRNPC-202ENST00000420743 C5P01031 1676 aa16.05■□□□□ 0.16
HNRNPC-202ENST00000420743 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
HNRNPC-202ENST00000420743 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
HNRNPC-202ENST00000420743 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
HNRNPC-202ENST00000420743 TAF1LQ8IZX4 1826 aa16.04■□□□□ 0.16
HNRNPC-202ENST00000420743 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-202ENST00000420743 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 CABP4P57796 275 aa16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 SMIM5Q71RC9 77 aa16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
HNRNPC-202ENST00000420743 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 SIK1P57059 783 aa16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.166e-11■■□□□ 14.2
HNRNPC-202ENST00000420743 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 SMARCC1Q92922 1105 aaPredicted RBP16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
HNRNPC-202ENST00000420743 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms