RNA–Protein interactions for RNA: ENST00000420591.1

SNED1-206, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 3

Gene SNED1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-206ENST00000420591 KIF20BQ96Q89 1820 aa27.43■■□□□ 1.98
SNED1-206ENST00000420591 KAT6BQ8WYB5 2073 aa27.42■■□□□ 1.98
SNED1-206ENST00000420591 HSPA5P11021 654 aaKnown RBP27.42■■□□□ 1.98
SNED1-206ENST00000420591 MYOM1P52179 1685 aa27.4■■□□□ 1.98
SNED1-206ENST00000420591 PRIM1P49642 420 aaKnown RBP27.4■■□□□ 1.98
SNED1-206ENST00000420591 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
SNED1-206ENST00000420591 MEGF6O75095 1541 aa27.4■■□□□ 1.98
SNED1-206ENST00000420591 ZBTB7AO95365 584 aa27.38■■□□□ 1.97
SNED1-206ENST00000420591 PDGFDQ9GZP0 370 aaPredicted RBP27.37■■□□□ 1.97
SNED1-206ENST00000420591 SLC27A3Q5K4L6 730 aa27.36■■□□□ 1.97
SNED1-206ENST00000420591 BTAF1O14981 1849 aa27.35■■□□□ 1.97
SNED1-206ENST00000420591 DCAF8L1A6NGE4 600 aa27.35■■□□□ 1.97
SNED1-206ENST00000420591 ATF5Q9Y2D1 282 aaPredicted RBP27.35■■□□□ 1.97
SNED1-206ENST00000420591 RGPD2P0DJD1 1756 aa27.35■■□□□ 1.97
SNED1-206ENST00000420591 PCDH11XQ9BZA7 1347 aa27.33■■□□□ 1.97
SNED1-206ENST00000420591 PCDH11YQ9BZA8 1340 aa27.33■■□□□ 1.97
SNED1-206ENST00000420591 LRRC4BQ9NT99 713 aa27.32■■□□□ 1.96
SNED1-206ENST00000420591 MTFR1LQ9H019 292 aa27.31■■□□□ 1.96
SNED1-206ENST00000420591 PANK3Q9H999 370 aa27.31■■□□□ 1.96
SNED1-206ENST00000420591 WASHC2AQ641Q2 1341 aa27.31■■□□□ 1.96
SNED1-206ENST00000420591 TNNT2P45379 298 aaPredicted RBP27.3■■□□□ 1.96
SNED1-206ENST00000420591 CASZ1Q86V15 1759 aa27.3■■□□□ 1.96
SNED1-206ENST00000420591 ZNF827Q17R98 1081 aa27.28■■□□□ 1.96
SNED1-206ENST00000420591 POLKQ9UBT6 870 aa27.28■■□□□ 1.96
SNED1-206ENST00000420591 SPG7Q9UQ90 795 aa27.26■■□□□ 1.95
SNED1-206ENST00000420591 DOT1LQ8TEK3 1739 aa27.25■■□□□ 1.95
SNED1-206ENST00000420591 PTGER2P43116 358 aa27.25■■□□□ 1.95
SNED1-206ENST00000420591 CCNL1Q9UK58 526 aaPredicted RBP27.25■■□□□ 1.95
SNED1-206ENST00000420591 NSD2O96028 1365 aa27.24■■□□□ 1.95
SNED1-206ENST00000420591 AKT1S1Q96B36 256 aa27.24■■□□□ 1.95
SNED1-206ENST00000420591 EYA1Q99502 592 aa27.24■■□□□ 1.95
SNED1-206ENST00000420591 TFCP2L1Q9NZI6 479 aa27.24■■□□□ 1.95
SNED1-206ENST00000420591 KCNQ4P56696 695 aa27.23■■□□□ 1.95
SNED1-206ENST00000420591 SHANK3Q9BYB0 1731 aa27.23■■□□□ 1.95
SNED1-206ENST00000420591 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
SNED1-206ENST00000420591 CYP27B1O15528 508 aa27.22■■□□□ 1.95
SNED1-206ENST00000420591 HMGB2P26583 209 aaKnown RBP27.22■■□□□ 1.95
SNED1-206ENST00000420591 MPRIPQ6WCQ1 1025 aa27.21■■□□□ 1.95
SNED1-206ENST00000420591 MORC1Q86VD1 984 aa27.2■■□□□ 1.94
SNED1-206ENST00000420591 SLC16A10Q8TF71 515 aa27.2■■□□□ 1.94
SNED1-206ENST00000420591 KNSTRNQ9Y448 316 aa27.2■■□□□ 1.94
SNED1-206ENST00000420591 EIF4A2Q14240 407 aaKnown RBP27.19■■□□□ 1.94
SNED1-206ENST00000420591 MAP2P11137 1827 aaKnown RBP27.18■■□□□ 1.94
SNED1-206ENST00000420591 ARXQ96QS3 562 aa27.18■■□□□ 1.94
SNED1-206ENST00000420591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.18■■□□□ 1.94
SNED1-206ENST00000420591 NCAPD2Q15021 1401 aa27.16■■□□□ 1.94
SNED1-206ENST00000420591 ANKRD26Q9UPS8 1709 aa27.16■■□□□ 1.94
SNED1-206ENST00000420591 POLD1P28340 1107 aa27.16■■□□□ 1.94
SNED1-206ENST00000420591 SMARCC1Q92922 1105 aaPredicted RBP27.16■■□□□ 1.94
SNED1-206ENST00000420591 FHDC1Q9C0D6 1143 aaPredicted RBP27.16■■□□□ 1.94
SNED1-206ENST00000420591 PNPLA7Q6ZV29 1317 aa27.16■■□□□ 1.94
SNED1-206ENST00000420591 MSH5O43196 834 aa27.15■■□□□ 1.94
SNED1-206ENST00000420591 SGIP1Q9BQI5 828 aa27.15■■□□□ 1.94
SNED1-206ENST00000420591 PALLDQ8WX93 1383 aa27.14■■□□□ 1.94
SNED1-206ENST00000420591 NKX1-1Q15270 411 aaPredicted RBP27.14■■□□□ 1.94
SNED1-206ENST00000420591 SYT17Q9BSW7 474 aa27.14■■□□□ 1.94
SNED1-206ENST00000420591 IFNL2Q8IZJ0 200 aa27.13■■□□□ 1.93
SNED1-206ENST00000420591 LY75O60449 1722 aa27.11■■□□□ 1.93
SNED1-206ENST00000420591 YY1P25490 414 aa27.11■■□□□ 1.93
SNED1-206ENST00000420591 PIGBQ92521 554 aa27.1■■□□□ 1.93
SNED1-206ENST00000420591 TMOD3Q9NYL9 352 aa27.1■■□□□ 1.93
SNED1-206ENST00000420591 PKD1L3Q7Z443 1732 aa27.1■■□□□ 1.93
SNED1-206ENST00000420591 PHKG2P15735 406 aa27.09■■□□□ 1.93
SNED1-206ENST00000420591 IGSF1Q8N6C5 1336 aa27.09■■□□□ 1.93
SNED1-206ENST00000420591 KLHL34Q8N239 644 aa27.08■■□□□ 1.93
SNED1-206ENST00000420591 KIF7Q2M1P5 1343 aa27.08■■□□□ 1.93
SNED1-206ENST00000420591 PLEKHG2Q9H7P9 1386 aa27.07■■□□□ 1.92
SNED1-206ENST00000420591 PLEKHO1Q53GL0 409 aaPredicted RBP27.06■■□□□ 1.92
SNED1-206ENST00000420591 FLAD1Q8NFF5 587 aa27.06■■□□□ 1.92
SNED1-206ENST00000420591 COL23A1Q86Y22 540 aaPredicted RBP27.05■■□□□ 1.92
SNED1-206ENST00000420591 QSER1Q2KHR3 1735 aa27.04■■□□□ 1.92
SNED1-206ENST00000420591 HSP90AB1P08238 724 aaKnown RBP27.04■■□□□ 1.92
SNED1-206ENST00000420591 AK7Q96M32 723 aa27.04■■□□□ 1.92
SNED1-206ENST00000420591 AMOTQ4VCS5 1084 aa27.03■■□□□ 1.92
SNED1-206ENST00000420591 MAP3K5Q99683 1374 aa27.02■■□□□ 1.92
SNED1-206ENST00000420591 AMER1Q5JTC6 1135 aaPredicted RBP27.01■■□□□ 1.91
SNED1-206ENST00000420591 TOGARAM1Q9Y4F4 1720 aa27.01■■□□□ 1.91
SNED1-206ENST00000420591 LOC102724428A0A0B4J2F2 783 aa27■■□□□ 1.91
SNED1-206ENST00000420591 SIK1P57059 783 aa27■■□□□ 1.91
SNED1-206ENST00000420591 ZNF530Q6P9A1 599 aaPredicted RBP27■■□□□ 1.91
SNED1-206ENST00000420591 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
SNED1-206ENST00000420591 ASAP1Q9ULH1 1129 aa26.99■■□□□ 1.91
SNED1-206ENST00000420591 ITGB4P16144 1822 aa26.98■■□□□ 1.91
SNED1-206ENST00000420591 C1orf141Q5JVX7 400 aa26.98■■□□□ 1.91
SNED1-206ENST00000420591 ERVV-2B6SEH9 535 aa26.97■■□□□ 1.91
SNED1-206ENST00000420591 MSL1Q68DK7 614 aa26.97■■□□□ 1.91
SNED1-206ENST00000420591 SULT6B1Q6IMI4 303 aa26.97■■□□□ 1.91
SNED1-206ENST00000420591 C5P01031 1676 aa26.97■■□□□ 1.91
SNED1-206ENST00000420591 TUBGCP6Q96RT7 1819 aa26.96■■□□□ 1.91
SNED1-206ENST00000420591 ATP6V1AP38606 617 aa26.96■■□□□ 1.91
SNED1-206ENST00000420591 GPR162Q16538 588 aa26.96■■□□□ 1.91
SNED1-206ENST00000420591 AEBP1Q8IUX7 1158 aa26.96■■□□□ 1.91
SNED1-206ENST00000420591 PHF14O94880 888 aa26.95■■□□□ 1.9
SNED1-206ENST00000420591 CABP4P57796 275 aa26.95■■□□□ 1.9
SNED1-206ENST00000420591 CC2D1BQ5T0F9 858 aaKnown RBP26.95■■□□□ 1.9
SNED1-206ENST00000420591 ATG3Q9NT62 314 aa26.95■■□□□ 1.9
SNED1-206ENST00000420591 IL13P35225 146 aa26.94■■□□□ 1.9
SNED1-206ENST00000420591 MTHFSP49914 203 aa26.94■■□□□ 1.9
SNED1-206ENST00000420591 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
SNED1-206ENST00000420591 LINC00116Q8NCU8 138 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms