RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 GAS6Q14393 721 aa8.02□□□□□ -1.13
SEMA3A-202ENST00000420047 CCDC125Q86Z20 511 aa8.02□□□□□ -1.13
SEMA3A-202ENST00000420047 EPS8L1Q8TE68 723 aa8.02□□□□□ -1.13
SEMA3A-202ENST00000420047 ATP1B4Q9UN42 357 aaPredicted RBP8.02□□□□□ -1.13
SEMA3A-202ENST00000420047 GPC1P35052 558 aa8.01□□□□□ -1.13
SEMA3A-202ENST00000420047 FOXR1Q6PIV2 292 aa8.01□□□□□ -1.13
SEMA3A-202ENST00000420047 TRIM22Q8IYM9 498 aa8.01□□□□□ -1.13
SEMA3A-202ENST00000420047 CUEDC1Q9NWM3 386 aaPredicted RBP8.01□□□□□ -1.13
SEMA3A-202ENST00000420047 USP17L8P0C7I0 530 aa8□□□□□ -1.13
SEMA3A-202ENST00000420047 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
SEMA3A-202ENST00000420047 HMX1Q9NP08 348 aaPredicted RBP8□□□□□ -1.13
SEMA3A-202ENST00000420047 MBIPQ9NS73 344 aa8□□□□□ -1.13
SEMA3A-202ENST00000420047 ATP5J2-PTCD1G3V325 749 aa7.99□□□□□ -1.13
SEMA3A-202ENST00000420047 PRICKLE2Q7Z3G6 844 aa7.99□□□□□ -1.13
SEMA3A-202ENST00000420047 FAM117AQ9C073 453 aa7.99□□□□□ -1.13
SEMA3A-202ENST00000420047 PHF20L1A8MW92 1017 aa7.98□□□□□ -1.13
SEMA3A-202ENST00000420047 ZNF837Q96EG3 531 aaPredicted RBP7.98□□□□□ -1.13
SEMA3A-202ENST00000420047 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
SEMA3A-202ENST00000420047 H7C1W4 665 aa7.97□□□□□ -1.13
SEMA3A-202ENST00000420047 BEND7Q8N7W2 519 aaPredicted RBP7.97□□□□□ -1.13
SEMA3A-202ENST00000420047 LRRC4BQ9NT99 713 aa7.97□□□□□ -1.13
SEMA3A-202ENST00000420047 DYRK1BQ9Y463 629 aa7.97□□□□□ -1.13
SEMA3A-202ENST00000420047 BCRP11274 1271 aa7.96□□□□□ -1.14
SEMA3A-202ENST00000420047 DBN1Q16643 649 aa7.96□□□□□ -1.14
SEMA3A-202ENST00000420047 IGF1RP08069 1367 aa7.96□□□□□ -1.14
SEMA3A-202ENST00000420047 RHOQP17081 205 aa7.95□□□□□ -1.14
SEMA3A-202ENST00000420047 RFC5P40937 340 aa7.95□□□□□ -1.14
SEMA3A-202ENST00000420047 GPBP1L1Q9HC44 474 aaPredicted RBP7.95□□□□□ -1.14
SEMA3A-202ENST00000420047 A0A1W2PRU2 124 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 WDR44Q5JSH3 913 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 RIPOR1Q6ZS17 1223 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 PODNQ7Z5L7 613 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
SEMA3A-202ENST00000420047 MEN1O00255 615 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 MSTNO14793 375 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 MCCD1P59942 119 aaPredicted RBP7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 ERVK-9P63128 1117 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 TMEM259Q4ZIN3 620 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 CC2D2BQ6DHV5 1058 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 DCAF5Q96JK2 942 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 TRIM34Q9BYJ4 488 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 NSFL1CQ9UNZ2 370 aaKnown RBP7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 CNTNAP5Q8WYK1 1306 aa7.93□□□□□ -1.14
SEMA3A-202ENST00000420047 PLA2G4EQ3MJ16 856 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 NEDD1Q8NHV4 660 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 NLRP3Q96P20 1036 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 GOPCQ9HD26 462 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
SEMA3A-202ENST00000420047 SPATA31C2B4DYI2 1134 aa7.91□□□□□ -1.14
SEMA3A-202ENST00000420047 GPR25O00155 361 aa7.91□□□□□ -1.14
SEMA3A-202ENST00000420047 POU4F2Q12837 409 aa7.91□□□□□ -1.14
SEMA3A-202ENST00000420047 SLC27A3Q5K4L6 730 aa7.91□□□□□ -1.14
SEMA3A-202ENST00000420047 GTPBP3Q969Y2 492 aaKnown RBP7.91□□□□□ -1.14
SEMA3A-202ENST00000420047 ACDQ96AP0 544 aa7.91□□□□□ -1.14
SEMA3A-202ENST00000420047 CLN3Q13286 438 aa7.9□□□□□ -1.14
SEMA3A-202ENST00000420047 NBPF10Q6P3W6 841 aaKnown RBP7.9□□□□□ -1.14
SEMA3A-202ENST00000420047 CYP2U1Q7Z449 544 aa7.9□□□□□ -1.14
SEMA3A-202ENST00000420047 NBPF15Q8N660 670 aa7.9□□□□□ -1.14
SEMA3A-202ENST00000420047 GAS2L1Q99501 681 aaPredicted RBP7.9□□□□□ -1.14
SEMA3A-202ENST00000420047 MX2P20592 715 aa7.89□□□□□ -1.15
SEMA3A-202ENST00000420047 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
SEMA3A-202ENST00000420047 ADAM23O75077 832 aa7.88□□□□□ -1.15
SEMA3A-202ENST00000420047 F11P03951 625 aa7.88□□□□□ -1.15
SEMA3A-202ENST00000420047 FBXO45P0C2W1 286 aa7.88□□□□□ -1.15
SEMA3A-202ENST00000420047 OIP5O43482 229 aa7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 MAP2K3P46734 347 aa7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 CFHR5Q9BXR6 569 aa7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 NUCKS1Q9H1E3 243 aaKnown RBP7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 ESF1Q9H501 851 aaKnown RBP7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 TIMMDC1Q9NPL8 285 aa7.87□□□□□ -1.15
SEMA3A-202ENST00000420047 ITGB2P05107 769 aa7.86□□□□□ -1.15
SEMA3A-202ENST00000420047 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
SEMA3A-202ENST00000420047 ZNF330Q9Y3S2 320 aaPredicted RBP7.86□□□□□ -1.15
SEMA3A-202ENST00000420047 WASLO00401 505 aaPredicted RBP7.85□□□□□ -1.15
SEMA3A-202ENST00000420047 TRAK2O60296 914 aa7.85□□□□□ -1.15
SEMA3A-202ENST00000420047 ALYREFQ86V81 257 aaKnown RBP7.85□□□□□ -1.15
SEMA3A-202ENST00000420047 GNRH1P01148 92 aa7.84□□□□□ -1.15
SEMA3A-202ENST00000420047 PROCP04070 461 aa7.84□□□□□ -1.15
SEMA3A-202ENST00000420047 SCTRP47872 440 aa7.84□□□□□ -1.15
SEMA3A-202ENST00000420047 NR1H3Q13133 447 aa7.84□□□□□ -1.15
SEMA3A-202ENST00000420047 OXCT2Q9BYC2 517 aaPredicted RBP7.84□□□□□ -1.15
SEMA3A-202ENST00000420047 OSBPL3Q9H4L5 887 aa7.84□□□□□ -1.15
SEMA3A-202ENST00000420047 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
SEMA3A-202ENST00000420047 PHF24Q9UPV7 400 aa7.83□□□□□ -1.16
SEMA3A-202ENST00000420047 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
SEMA3A-202ENST00000420047 LBRQ14739 615 aaKnown RBP7.82□□□□□ -1.16
SEMA3A-202ENST00000420047 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
SEMA3A-202ENST00000420047 ARHGEF10LQ9HCE6 1279 aa7.82□□□□□ -1.16
SEMA3A-202ENST00000420047 SOCS7O14512 581 aa7.81□□□□□ -1.16
SEMA3A-202ENST00000420047 GDF2Q9UK05 429 aaPredicted RBP7.81□□□□□ -1.16
SEMA3A-202ENST00000420047 MKL2Q9ULH7 1088 aa7.81□□□□□ -1.16
SEMA3A-202ENST00000420047 A0A1B0GTH6 734 aa7.8□□□□□ -1.16
SEMA3A-202ENST00000420047 CENPCQ03188 943 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms