RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 DDX54Q8TDD1 881 aaKnown RBP28.29■■■□□ 2.12
MCF2L-212ENST00000420013 ZCRB1Q8TBF4 217 aaKnown RBP28.27■■■□□ 2.12
MCF2L-212ENST00000420013 CARD14Q9BXL6 1004 aa28.27■■■□□ 2.12
MCF2L-212ENST00000420013 MAP2P11137 1827 aaKnown RBP28.27■■■□□ 2.12
MCF2L-212ENST00000420013 NCAPD2Q15021 1401 aa28.26■■■□□ 2.12
MCF2L-212ENST00000420013 SLC27A3Q5K4L6 730 aa28.25■■■□□ 2.11
MCF2L-212ENST00000420013 NBPF6Q5VWK0 638 aa28.25■■■□□ 2.11
MCF2L-212ENST00000420013 RAPGEF4Q8WZA2 1011 aa28.25■■■□□ 2.11
MCF2L-212ENST00000420013 NBPF4Q96M43 638 aa28.25■■■□□ 2.11
MCF2L-212ENST00000420013 TUBGCP6Q96RT7 1819 aa28.25■■■□□ 2.11
MCF2L-212ENST00000420013 NSD2O96028 1365 aa28.24■■■□□ 2.11
MCF2L-212ENST00000420013 MTFR1LQ9H019 292 aa28.22■■■□□ 2.11
MCF2L-212ENST00000420013 PCDH11XQ9BZA7 1347 aa28.21■■■□□ 2.11
MCF2L-212ENST00000420013 PCDH11YQ9BZA8 1340 aa28.21■■■□□ 2.11
MCF2L-212ENST00000420013 ZBTB7AO95365 584 aa28.21■■■□□ 2.11
MCF2L-212ENST00000420013 TATP17735 454 aaPredicted RBP28.21■■■□□ 2.11
MCF2L-212ENST00000420013 HSP90AB2PQ58FF8 381 aa28.21■■■□□ 2.11
MCF2L-212ENST00000420013 PDGFDQ9GZP0 370 aaPredicted RBP28.21■■■□□ 2.11
MCF2L-212ENST00000420013 COL24A1Q17RW2 1714 aa28.21■■■□□ 2.11
MCF2L-212ENST00000420013 EIF4G2P78344 907 aaKnown RBP eCLIP28.2■■■□□ 2.1
MCF2L-212ENST00000420013 PTGER2P43116 358 aa28.19■■■□□ 2.1
MCF2L-212ENST00000420013 USHBP1Q8N6Y0 703 aa28.19■■■□□ 2.1
MCF2L-212ENST00000420013 SYTL4Q96C24 671 aaPredicted RBP28.18■■■□□ 2.1
MCF2L-212ENST00000420013 LRRC4BQ9NT99 713 aa28.18■■■□□ 2.1
MCF2L-212ENST00000420013 EMILIN1Q9Y6C2 1016 aa28.18■■■□□ 2.1
MCF2L-212ENST00000420013 TOGARAM1Q9Y4F4 1720 aa28.18■■■□□ 2.1
MCF2L-212ENST00000420013 PRIM1P49642 420 aaKnown RBP28.17■■■□□ 2.1
MCF2L-212ENST00000420013 ZNF827Q17R98 1081 aa28.16■■■□□ 2.1
MCF2L-212ENST00000420013 ITGB4P16144 1822 aa28.15■■■□□ 2.1
MCF2L-212ENST00000420013 DCAF8L1A6NGE4 600 aa28.15■■■□□ 2.1
MCF2L-212ENST00000420013 CCER1Q8TC90 406 aaPredicted RBP28.15■■■□□ 2.1
MCF2L-212ENST00000420013 C5P01031 1676 aa28.15■■■□□ 2.1
MCF2L-212ENST00000420013 PLEKHG2Q9H7P9 1386 aa28.14■■■□□ 2.1
MCF2L-212ENST00000420013 AKT1S1Q96B36 256 aa28.14■■■□□ 2.1
MCF2L-212ENST00000420013 WASHC2AQ641Q2 1341 aa28.14■■■□□ 2.09
MCF2L-212ENST00000420013 SGIP1Q9BQI5 828 aa28.13■■■□□ 2.09
MCF2L-212ENST00000420013 ATF5Q9Y2D1 282 aaPredicted RBP28.12■■■□□ 2.09
MCF2L-212ENST00000420013 TAF1LQ8IZX4 1826 aa28.12■■■□□ 2.09
MCF2L-212ENST00000420013 HSPA5P11021 654 aaKnown RBP28.11■■■□□ 2.09
MCF2L-212ENST00000420013 SLC16A10Q8TF71 515 aa28.11■■■□□ 2.09
MCF2L-212ENST00000420013 MAP3K5Q99683 1374 aa28.11■■■□□ 2.09
MCF2L-212ENST00000420013 POLR3GLQ9BT43 218 aa28.1■■■□□ 2.09
MCF2L-212ENST00000420013 HMGB2P26583 209 aaKnown RBP28.09■■■□□ 2.09
MCF2L-212ENST00000420013 PPM1GO15355 546 aaPredicted RBP28.07■■■□□ 2.08
MCF2L-212ENST00000420013 CCNL1Q9UK58 526 aaPredicted RBP28.07■■■□□ 2.08
MCF2L-212ENST00000420013 POLKQ9UBT6 870 aa28.06■■■□□ 2.08
MCF2L-212ENST00000420013 PNPLA7Q6ZV29 1317 aa28.06■■■□□ 2.08
MCF2L-212ENST00000420013 CYP27B1O15528 508 aa28.05■■■□□ 2.08
MCF2L-212ENST00000420013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.04■■■□□ 2.08
MCF2L-212ENST00000420013 SPG7Q9UQ90 795 aa28.04■■■□□ 2.08
MCF2L-212ENST00000420013 PALLDQ8WX93 1383 aa28.03■■■□□ 2.08
MCF2L-212ENST00000420013 ARXQ96QS3 562 aa28.03■■■□□ 2.08
MCF2L-212ENST00000420013 FHDC1Q9C0D6 1143 aaPredicted RBP28.03■■■□□ 2.08
MCF2L-212ENST00000420013 TFCP2L1Q9NZI6 479 aa28.03■■■□□ 2.08
MCF2L-212ENST00000420013 EYA1Q99502 592 aa28.01■■■□□ 2.07
MCF2L-212ENST00000420013 SYT17Q9BSW7 474 aa28.01■■■□□ 2.07
MCF2L-212ENST00000420013 C4BP0C0L5 1744 aa28.01■■■□□ 2.07
MCF2L-212ENST00000420013 YY1P25490 414 aa28■■■□□ 2.07
MCF2L-212ENST00000420013 NKX1-1Q15270 411 aaPredicted RBP28■■■□□ 2.07
MCF2L-212ENST00000420013 CHD4Q14839 1912 aa27.99■■■□□ 2.07
MCF2L-212ENST00000420013 SMARCC1Q92922 1105 aaPredicted RBP27.99■■■□□ 2.07
MCF2L-212ENST00000420013 PANK3Q9H999 370 aa27.99■■■□□ 2.07
MCF2L-212ENST00000420013 POLD1P28340 1107 aa27.98■■■□□ 2.07
MCF2L-212ENST00000420013 KCNQ4P56696 695 aa27.98■■■□□ 2.07
MCF2L-212ENST00000420013 IGSF1Q8N6C5 1336 aa27.97■■■□□ 2.07
MCF2L-212ENST00000420013 EIF4A2Q14240 407 aaKnown RBP27.97■■■□□ 2.07
MCF2L-212ENST00000420013 UBR3Q6ZT12 1888 aa27.96■■■□□ 2.07
MCF2L-212ENST00000420013 MPRIPQ6WCQ1 1025 aa27.95■■■□□ 2.06
MCF2L-212ENST00000420013 TNNT2P45379 298 aaPredicted RBP27.94■■■□□ 2.06
MCF2L-212ENST00000420013 ZNF831Q5JPB2 1677 aa27.93■■■□□ 2.06
MCF2L-212ENST00000420013 IFNL2Q8IZJ0 200 aa27.92■■■□□ 2.06
MCF2L-212ENST00000420013 FLAD1Q8NFF5 587 aa27.92■■■□□ 2.06
MCF2L-212ENST00000420013 PHKG2P15735 406 aa27.91■■■□□ 2.06
MCF2L-212ENST00000420013 MORC1Q86VD1 984 aa27.89■■■□□ 2.06
MCF2L-212ENST00000420013 PIGBQ92521 554 aa27.89■■■□□ 2.06
MCF2L-212ENST00000420013 TMOD3Q9NYL9 352 aa27.89■■■□□ 2.06
MCF2L-212ENST00000420013 KNSTRNQ9Y448 316 aa27.89■■■□□ 2.06
MCF2L-212ENST00000420013 UTRNP46939 3433 aa27.87■■■□□ 2.05
MCF2L-212ENST00000420013 COL23A1Q86Y22 540 aaPredicted RBP27.86■■■□□ 2.05
MCF2L-212ENST00000420013 AK7Q96M32 723 aa27.85■■■□□ 2.05
MCF2L-212ENST00000420013 MSH5O43196 834 aa27.84■■■□□ 2.05
MCF2L-212ENST00000420013 HSP90AB1P08238 724 aaKnown RBP27.84■■■□□ 2.05
MCF2L-212ENST00000420013 KIF7Q2M1P5 1343 aa27.84■■■□□ 2.05
MCF2L-212ENST00000420013 LOC102724428A0A0B4J2F2 783 aa27.83■■■□□ 2.05
MCF2L-212ENST00000420013 SIK1P57059 783 aa27.83■■■□□ 2.05
MCF2L-212ENST00000420013 KDRP35968 1356 aa27.83■■■□□ 2.05
MCF2L-212ENST00000420013 COL5A3P25940 1745 aaPredicted RBP27.82■■■□□ 2.04
MCF2L-212ENST00000420013 AMOTQ4VCS5 1084 aa27.81■■■□□ 2.04
MCF2L-212ENST00000420013 AMER1Q5JTC6 1135 aaPredicted RBP27.81■■■□□ 2.04
MCF2L-212ENST00000420013 PLEKHO1Q53GL0 409 aaPredicted RBP27.8■■■□□ 2.04
MCF2L-212ENST00000420013 KLHL34Q8N239 644 aa27.8■■■□□ 2.04
MCF2L-212ENST00000420013 CICQ96RK0 1608 aaPredicted RBP27.8■■■□□ 2.04
MCF2L-212ENST00000420013 SCN11AQ9UI33 1791 aa27.79■■■□□ 2.04
MCF2L-212ENST00000420013 KDM6AO15550 1401 aaPredicted RBP27.79■■■□□ 2.04
MCF2L-212ENST00000420013 ERVV-2B6SEH9 535 aa27.79■■■□□ 2.04
MCF2L-212ENST00000420013 SSFA2P28290 1259 aa27.79■■■□□ 2.04
MCF2L-212ENST00000420013 DCAF5Q96JK2 942 aa27.79■■■□□ 2.04
MCF2L-212ENST00000420013 ZNF530Q6P9A1 599 aaPredicted RBP27.76■■■□□ 2.03
MCF2L-212ENST00000420013 ASAP1Q9ULH1 1129 aa27.76■■■□□ 2.03
MCF2L-212ENST00000420013 MSL1Q68DK7 614 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms