RNA–Protein interactions for RNA: ENST00000419986.1

VIL1-203, Transcript of villin 1, humanhuman

TSL 3

Gene VIL1, Length 639 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-203ENST00000419986 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
VIL1-203ENST00000419986 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
VIL1-203ENST00000419986 EP400Q96L91 3159 aa16.73■□□□□ 0.27
VIL1-203ENST00000419986 BCL9O00512 1426 aa16.72■□□□□ 0.27
VIL1-203ENST00000419986 SULT6B1Q6IMI4 303 aa16.72■□□□□ 0.27
VIL1-203ENST00000419986 ZCRB1Q8TBF4 217 aaKnown RBP16.72■□□□□ 0.27
VIL1-203ENST00000419986 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
VIL1-203ENST00000419986 HMOX1P09601 288 aa16.7■□□□□ 0.26
VIL1-203ENST00000419986 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
VIL1-203ENST00000419986 CYP27B1O15528 508 aa16.69■□□□□ 0.26
VIL1-203ENST00000419986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.26
VIL1-203ENST00000419986 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
VIL1-203ENST00000419986 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
VIL1-203ENST00000419986 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
VIL1-203ENST00000419986 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
VIL1-203ENST00000419986 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
VIL1-203ENST00000419986 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
VIL1-203ENST00000419986 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
VIL1-203ENST00000419986 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
VIL1-203ENST00000419986 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
VIL1-203ENST00000419986 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
VIL1-203ENST00000419986 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
VIL1-203ENST00000419986 ANP32CO43423 234 aa16.64■□□□□ 0.25
VIL1-203ENST00000419986 TRIM37O94972 964 aa16.64■□□□□ 0.25
VIL1-203ENST00000419986 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
VIL1-203ENST00000419986 KCNQ2O43526 872 aa16.63■□□□□ 0.25
VIL1-203ENST00000419986 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
VIL1-203ENST00000419986 PHKG2P15735 406 aa16.63■□□□□ 0.25
VIL1-203ENST00000419986 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
VIL1-203ENST00000419986 AMOTQ4VCS5 1084 aa16.63■□□□□ 0.25
VIL1-203ENST00000419986 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
VIL1-203ENST00000419986 CCDC125Q86Z20 511 aa16.63■□□□□ 0.25
VIL1-203ENST00000419986 NHSQ6T4R5 1651 aa16.62■□□□□ 0.25
VIL1-203ENST00000419986 TOGARAM1Q9Y4F4 1720 aa16.62■□□□□ 0.25
VIL1-203ENST00000419986 FCHSD2O94868 740 aa16.62■□□□□ 0.25
VIL1-203ENST00000419986 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
VIL1-203ENST00000419986 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
VIL1-203ENST00000419986 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
VIL1-203ENST00000419986 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
VIL1-203ENST00000419986 ACSBG1Q96GR2 724 aa16.61■□□□□ 0.25
VIL1-203ENST00000419986 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
VIL1-203ENST00000419986 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
VIL1-203ENST00000419986 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
VIL1-203ENST00000419986 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
VIL1-203ENST00000419986 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
VIL1-203ENST00000419986 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
VIL1-203ENST00000419986 DEFB132Q7Z7B7 95 aa16.58■□□□□ 0.24
VIL1-203ENST00000419986 BTAF1O14981 1849 aa16.56■□□□□ 0.24
VIL1-203ENST00000419986 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
VIL1-203ENST00000419986 APBA3O96018 575 aa16.56■□□□□ 0.24
VIL1-203ENST00000419986 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
VIL1-203ENST00000419986 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
VIL1-203ENST00000419986 ITGB4P16144 1822 aa16.56■□□□□ 0.24
VIL1-203ENST00000419986 SF3B2Q13435 895 aaKnown RBP16.55■□□□□ 0.24
VIL1-203ENST00000419986 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
VIL1-203ENST00000419986 CAMKK2Q96RR4 588 aa16.55■□□□□ 0.24
VIL1-203ENST00000419986 SCN11AQ9UI33 1791 aa16.54■□□□□ 0.24
VIL1-203ENST00000419986 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
VIL1-203ENST00000419986 BAG6P46379 1132 aa16.54■□□□□ 0.24
VIL1-203ENST00000419986 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
VIL1-203ENST00000419986 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
VIL1-203ENST00000419986 MPRIPQ6WCQ1 1025 aa16.54■□□□□ 0.24
VIL1-203ENST00000419986 PLSCR1O15162 318 aa16.53■□□□□ 0.24
VIL1-203ENST00000419986 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
VIL1-203ENST00000419986 PNISRQ8TF01 805 aaKnown RBP16.53■□□□□ 0.24
VIL1-203ENST00000419986 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
VIL1-203ENST00000419986 KAT6BQ8WYB5 2073 aa16.53■□□□□ 0.24
VIL1-203ENST00000419986 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
VIL1-203ENST00000419986 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
VIL1-203ENST00000419986 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
VIL1-203ENST00000419986 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
VIL1-203ENST00000419986 EZH2Q15910 746 aaKnown RBP16.52■□□□□ 0.24
VIL1-203ENST00000419986 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
VIL1-203ENST00000419986 PROM2Q8N271 834 aa16.52■□□□□ 0.24
VIL1-203ENST00000419986 PIGBQ92521 554 aa16.52■□□□□ 0.24
VIL1-203ENST00000419986 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
VIL1-203ENST00000419986 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
VIL1-203ENST00000419986 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
VIL1-203ENST00000419986 RREB1Q92766 1687 aa16.51■□□□□ 0.23
VIL1-203ENST00000419986 MRC1P22897 1456 aa16.51■□□□□ 0.23
VIL1-203ENST00000419986 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
VIL1-203ENST00000419986 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
VIL1-203ENST00000419986 VIRMAQ69YN4 1812 aaKnown RBP16.51■□□□□ 0.23
VIL1-203ENST00000419986 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
VIL1-203ENST00000419986 GNAT3A8MTJ3 354 aa16.49■□□□□ 0.23
VIL1-203ENST00000419986 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
VIL1-203ENST00000419986 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
VIL1-203ENST00000419986 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
VIL1-203ENST00000419986 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
VIL1-203ENST00000419986 RUNDC1Q96C34 613 aa16.48■□□□□ 0.23
VIL1-203ENST00000419986 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
VIL1-203ENST00000419986 LY75O60449 1722 aa16.48■□□□□ 0.23
VIL1-203ENST00000419986 CABP4P57796 275 aa16.47■□□□□ 0.23
VIL1-203ENST00000419986 NFATC2IPQ8NCF5 419 aa16.47■□□□□ 0.23
VIL1-203ENST00000419986 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
VIL1-203ENST00000419986 ASAP1Q9ULH1 1129 aa16.47■□□□□ 0.23
VIL1-203ENST00000419986 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
VIL1-203ENST00000419986 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
VIL1-203ENST00000419986 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.23
VIL1-203ENST00000419986 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms