RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 HDGFL2Q7Z4V5 671 aaPredicted RBP19.45■□□□□ 0.7
NOD1-205ENST00000419799 IP6K1Q92551 441 aa19.45■□□□□ 0.7
NOD1-205ENST00000419799 FAM208AQ9UK61 1670 aaKnown RBP19.45■□□□□ 0.7
NOD1-205ENST00000419799 LY75O60449 1722 aa19.45■□□□□ 0.7
NOD1-205ENST00000419799 PRIM1P49642 420 aaKnown RBP19.44■□□□□ 0.7
NOD1-205ENST00000419799 KAT6BQ8WYB5 2073 aa19.44■□□□□ 0.7
NOD1-205ENST00000419799 YBX3P16989 372 aaKnown RBP eCLIP19.43■□□□□ 0.7
NOD1-205ENST00000419799 KCNQ4P56696 695 aa19.43■□□□□ 0.7
NOD1-205ENST00000419799 SYTL4Q96C24 671 aaPredicted RBP19.43■□□□□ 0.7
NOD1-205ENST00000419799 NSD2O96028 1365 aa19.43■□□□□ 0.7
NOD1-205ENST00000419799 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
NOD1-205ENST00000419799 SLC12A5Q9H2X9 1139 aa19.41■□□□□ 0.7
NOD1-205ENST00000419799 DOT1LQ8TEK3 1739 aa19.41■□□□□ 0.7
NOD1-205ENST00000419799 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
NOD1-205ENST00000419799 CCNL1Q9UK58 526 aaPredicted RBP19.4■□□□□ 0.7
NOD1-205ENST00000419799 COL23A1Q86Y22 540 aaPredicted RBP19.39■□□□□ 0.69
NOD1-205ENST00000419799 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
NOD1-205ENST00000419799 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
NOD1-205ENST00000419799 LTV1Q96GA3 475 aaPredicted RBP19.38■□□□□ 0.69
NOD1-205ENST00000419799 PUS7Q96PZ0 661 aaKnown RBP19.38■□□□□ 0.69
NOD1-205ENST00000419799 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
NOD1-205ENST00000419799 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
NOD1-205ENST00000419799 ATP10DQ9P241 1426 aa19.37■□□□□ 0.69
NOD1-205ENST00000419799 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
NOD1-205ENST00000419799 USP47Q96K76 1375 aa19.36■□□□□ 0.69
NOD1-205ENST00000419799 CD2APQ9Y5K6 639 aa19.36■□□□□ 0.69
NOD1-205ENST00000419799 HMGB2P26583 209 aaKnown RBP19.35■□□□□ 0.69
NOD1-205ENST00000419799 HOXC9P31274 260 aa19.35■□□□□ 0.69
NOD1-205ENST00000419799 MEGF6O75095 1541 aa19.35■□□□□ 0.69
NOD1-205ENST00000419799 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
NOD1-205ENST00000419799 GPBP1L1Q9HC44 474 aaPredicted RBP19.33■□□□□ 0.68
NOD1-205ENST00000419799 ADCY9O60503 1353 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 AMPHP49418 695 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 MSL1Q68DK7 614 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 FLAD1Q8NFF5 587 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 COG3Q96JB2 828 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 TIMELESSQ9UNS1 1208 aa19.32■□□□□ 0.68
NOD1-205ENST00000419799 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
NOD1-205ENST00000419799 HSPA6P17066 643 aa19.3■□□□□ 0.68
NOD1-205ENST00000419799 RTL1A6NKG5 1358 aa19.3■□□□□ 0.68
NOD1-205ENST00000419799 C5P01031 1676 aa19.3■□□□□ 0.68
NOD1-205ENST00000419799 RGPD2P0DJD1 1756 aa19.29■□□□□ 0.68
NOD1-205ENST00000419799 TESK2Q96S53 571 aa19.29■□□□□ 0.68
NOD1-205ENST00000419799 FBLN1P23142 703 aa19.27■□□□□ 0.68
NOD1-205ENST00000419799 NBPF6Q5VWK0 638 aa19.27■□□□□ 0.68
NOD1-205ENST00000419799 NBPF4Q96M43 638 aa19.27■□□□□ 0.68
NOD1-205ENST00000419799 RAPGEF4Q8WZA2 1011 aa19.26■□□□□ 0.67
NOD1-205ENST00000419799 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
NOD1-205ENST00000419799 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
NOD1-205ENST00000419799 PCDH11XQ9BZA7 1347 aa19.24■□□□□ 0.67
NOD1-205ENST00000419799 PCDH11YQ9BZA8 1340 aa19.24■□□□□ 0.67
NOD1-205ENST00000419799 TATP17735 454 aaPredicted RBP19.23■□□□□ 0.67
NOD1-205ENST00000419799 TMF1P82094 1093 aa19.23■□□□□ 0.67
NOD1-205ENST00000419799 ZNF526Q8TF50 670 aaPredicted RBP19.23■□□□□ 0.67
NOD1-205ENST00000419799 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
NOD1-205ENST00000419799 C4BP0C0L5 1744 aa19.22■□□□□ 0.67
NOD1-205ENST00000419799 USHBP1Q8N6Y0 703 aa19.22■□□□□ 0.67
NOD1-205ENST00000419799 IGSF1Q8N6C5 1336 aa19.22■□□□□ 0.67
NOD1-205ENST00000419799 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
NOD1-205ENST00000419799 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
NOD1-205ENST00000419799 MPRIPQ6WCQ1 1025 aa19.21■□□□□ 0.67
NOD1-205ENST00000419799 SMARCC1Q92922 1105 aaPredicted RBP19.21■□□□□ 0.67
NOD1-205ENST00000419799 AK7Q96M32 723 aa19.21■□□□□ 0.67
NOD1-205ENST00000419799 NSD3Q9BZ95 1437 aa19.21■□□□□ 0.67
NOD1-205ENST00000419799 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
NOD1-205ENST00000419799 KIF3CO14782 793 aa19.19■□□□□ 0.66
NOD1-205ENST00000419799 AMIGO3Q86WK7 504 aa19.19■□□□□ 0.66
NOD1-205ENST00000419799 INSRP06213 1382 aa19.19■□□□□ 0.66
NOD1-205ENST00000419799 FYB1O15117 783 aa19.18■□□□□ 0.66
NOD1-205ENST00000419799 CYP27B1O15528 508 aa19.18■□□□□ 0.66
NOD1-205ENST00000419799 KIF24Q5T7B8 1368 aa19.18■□□□□ 0.66
NOD1-205ENST00000419799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
NOD1-205ENST00000419799 SSFA2P28290 1259 aa19.17■□□□□ 0.66
NOD1-205ENST00000419799 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
NOD1-205ENST00000419799 UBR3Q6ZT12 1888 aa19.17■□□□□ 0.66
NOD1-205ENST00000419799 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
NOD1-205ENST00000419799 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
NOD1-205ENST00000419799 PHF14O94880 888 aa19.15■□□□□ 0.66
NOD1-205ENST00000419799 GGNBP2Q9H3C7 697 aa19.15■□□□□ 0.66
NOD1-205ENST00000419799 FLT4P35916 1363 aa19.15■□□□□ 0.66
NOD1-205ENST00000419799 ITGB4P16144 1822 aa19.14■□□□□ 0.65
NOD1-205ENST00000419799 NKX1-1Q15270 411 aaPredicted RBP19.14■□□□□ 0.65
NOD1-205ENST00000419799 PIGBQ92521 554 aa19.14■□□□□ 0.65
NOD1-205ENST00000419799 WWC3Q9ULE0 1092 aa19.14■□□□□ 0.65
NOD1-205ENST00000419799 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
NOD1-205ENST00000419799 APLP1P51693 650 aa19.13■□□□□ 0.65
NOD1-205ENST00000419799 SMIM5Q71RC9 77 aa19.13■□□□□ 0.65
NOD1-205ENST00000419799 PKD1L3Q7Z443 1732 aa19.13■□□□□ 0.65
NOD1-205ENST00000419799 MAP2P11137 1827 aaKnown RBP19.12■□□□□ 0.65
NOD1-205ENST00000419799 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
NOD1-205ENST00000419799 SIK1P57059 783 aa19.12■□□□□ 0.65
NOD1-205ENST00000419799 EIF4G2P78344 907 aaKnown RBP eCLIP19.12■□□□□ 0.65
NOD1-205ENST00000419799 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
NOD1-205ENST00000419799 LINC00116Q8NCU8 138 aa19.11■□□□□ 0.65
NOD1-205ENST00000419799 NCAPD2Q15021 1401 aa19.1■□□□□ 0.65
NOD1-205ENST00000419799 TOMM70O94826 608 aa19.1■□□□□ 0.65
NOD1-205ENST00000419799 DNAJC5GQ8N7S2 189 aa19.09■□□□□ 0.65
NOD1-205ENST00000419799 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
NOD1-205ENST00000419799 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms