RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
ATG4B-208ENST00000419606 PHF23Q9BUL5 403 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-208ENST00000419606 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
ATG4B-208ENST00000419606 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
ATG4B-208ENST00000419606 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
ATG4B-208ENST00000419606 OVOS2A0A0G2JMS6 1433 aa17■□□□□ 0.31
ATG4B-208ENST00000419606 APAF1O14727 1248 aa17■□□□□ 0.31
ATG4B-208ENST00000419606 MTHFSDQ2M296 383 aaKnown RBP17■□□□□ 0.31
ATG4B-208ENST00000419606 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
ATG4B-208ENST00000419606 BARGINQ6ZT62 677 aa16.99■□□□□ 0.31
ATG4B-208ENST00000419606 DLG5Q8TDM6 1919 aa16.99■□□□□ 0.31
ATG4B-208ENST00000419606 LRRC37A3O60309 1634 aa16.99■□□□□ 0.31
ATG4B-208ENST00000419606 THSD7AQ9UPZ6 1657 aa16.98■□□□□ 0.31
ATG4B-208ENST00000419606 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
ATG4B-208ENST00000419606 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-208ENST00000419606 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
ATG4B-208ENST00000419606 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
ATG4B-208ENST00000419606 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-208ENST00000419606 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
ATG4B-208ENST00000419606 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
ATG4B-208ENST00000419606 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
ATG4B-208ENST00000419606 CYP27B1O15528 508 aa16.95■□□□□ 0.3
ATG4B-208ENST00000419606 ONECUT3O60422 494 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-208ENST00000419606 RBM6P78332 1123 aaKnown RBP16.95■□□□□ 0.3
ATG4B-208ENST00000419606 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-208ENST00000419606 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
ATG4B-208ENST00000419606 A0A0G2JS52 829 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 NEFMP07197 916 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 MYT1Q01538 1121 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
ATG4B-208ENST00000419606 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
ATG4B-208ENST00000419606 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
ATG4B-208ENST00000419606 EXOC5O00471 708 aa16.93■□□□□ 0.3
ATG4B-208ENST00000419606 RXRBP28702 533 aa16.93■□□□□ 0.3
ATG4B-208ENST00000419606 RIPK4P57078 832 aa16.93■□□□□ 0.3
ATG4B-208ENST00000419606 HNRNPUQ00839 825 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATG4B-208ENST00000419606 DDB1Q16531 1140 aa16.93■□□□□ 0.3
ATG4B-208ENST00000419606 CDCA7Q9BWT1 371 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-208ENST00000419606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATG4B-208ENST00000419606 PHKG2P15735 406 aa16.92■□□□□ 0.3
ATG4B-208ENST00000419606 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
ATG4B-208ENST00000419606 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
ATG4B-208ENST00000419606 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
ATG4B-208ENST00000419606 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
ATG4B-208ENST00000419606 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-208ENST00000419606 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 PLEKHG2Q9H7P9 1386 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 MPRIPQ6WCQ1 1025 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 MCM10Q7L590 875 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
ATG4B-208ENST00000419606 LGR6Q9HBX8 967 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 PCDH11XQ9BZA7 1347 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 PCDH11YQ9BZA8 1340 aa16.9■□□□□ 0.3
ATG4B-208ENST00000419606 RGS12O14924 1447 aa16.89■□□□□ 0.29
ATG4B-208ENST00000419606 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
ATG4B-208ENST00000419606 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.29
ATG4B-208ENST00000419606 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
ATG4B-208ENST00000419606 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-208ENST00000419606 TOGARAM1Q9Y4F4 1720 aa16.88■□□□□ 0.29
ATG4B-208ENST00000419606 GNAT3A8MTJ3 354 aa16.88■□□□□ 0.29
ATG4B-208ENST00000419606 IL17REQ8NFR9 667 aa16.88■□□□□ 0.29
ATG4B-208ENST00000419606 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
ATG4B-208ENST00000419606 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
ATG4B-208ENST00000419606 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
ATG4B-208ENST00000419606 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
ATG4B-208ENST00000419606 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
ATG4B-208ENST00000419606 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-208ENST00000419606 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
ATG4B-208ENST00000419606 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
ATG4B-208ENST00000419606 CCDC27Q2M243 656 aa16.84■□□□□ 0.29
ATG4B-208ENST00000419606 RTF1Q92541 710 aaKnown RBP16.84■□□□□ 0.29
ATG4B-208ENST00000419606 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
ATG4B-208ENST00000419606 KRT27Q7Z3Y8 459 aa16.83■□□□□ 0.28
ATG4B-208ENST00000419606 ACSBG1Q96GR2 724 aa16.83■□□□□ 0.28
ATG4B-208ENST00000419606 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
ATG4B-208ENST00000419606 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-208ENST00000419606 ITGB4P16144 1822 aa16.82■□□□□ 0.28
ATG4B-208ENST00000419606 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-208ENST00000419606 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
ATG4B-208ENST00000419606 LMOD3Q0VAK6 560 aa16.82■□□□□ 0.28
ATG4B-208ENST00000419606 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
ATG4B-208ENST00000419606 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
ATG4B-208ENST00000419606 HSP90AB1P08238 724 aaKnown RBP16.81■□□□□ 0.28
ATG4B-208ENST00000419606 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
ATG4B-208ENST00000419606 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
ATG4B-208ENST00000419606 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
ATG4B-208ENST00000419606 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
ATG4B-208ENST00000419606 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
ATG4B-208ENST00000419606 KCNQ2O43526 872 aa16.79■□□□□ 0.28
ATG4B-208ENST00000419606 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
ATG4B-208ENST00000419606 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
ATG4B-208ENST00000419606 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
ATG4B-208ENST00000419606 MRC1P22897 1456 aa16.79■□□□□ 0.28
ATG4B-208ENST00000419606 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
ATG4B-208ENST00000419606 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
ATG4B-208ENST00000419606 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms