RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
THUMPD3-204ENST00000419437 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
THUMPD3-204ENST00000419437 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
THUMPD3-204ENST00000419437 PPM1GO15355 546 aaPredicted RBP16.11■□□□□ 0.17
THUMPD3-204ENST00000419437 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
THUMPD3-204ENST00000419437 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
THUMPD3-204ENST00000419437 HSP90AB2PQ58FF8 381 aa16.1■□□□□ 0.17
THUMPD3-204ENST00000419437 ACSBG1Q96GR2 724 aa16.1■□□□□ 0.17
THUMPD3-204ENST00000419437 SYT17Q9BSW7 474 aa16.1■□□□□ 0.17
THUMPD3-204ENST00000419437 FHDC1Q9C0D6 1143 aaPredicted RBP16.1■□□□□ 0.17
THUMPD3-204ENST00000419437 COL24A1Q17RW2 1714 aa16.09■□□□□ 0.17
THUMPD3-204ENST00000419437 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
THUMPD3-204ENST00000419437 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
THUMPD3-204ENST00000419437 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
THUMPD3-204ENST00000419437 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
THUMPD3-204ENST00000419437 USHBP1Q8N6Y0 703 aa16.07■□□□□ 0.16
THUMPD3-204ENST00000419437 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
THUMPD3-204ENST00000419437 ARXQ96QS3 562 aa16.07■□□□□ 0.16
THUMPD3-204ENST00000419437 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
THUMPD3-204ENST00000419437 SLC16A10Q8TF71 515 aa16.06■□□□□ 0.16
THUMPD3-204ENST00000419437 LY75O60449 1722 aa16.05■□□□□ 0.16
THUMPD3-204ENST00000419437 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
THUMPD3-204ENST00000419437 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
THUMPD3-204ENST00000419437 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
THUMPD3-204ENST00000419437 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
THUMPD3-204ENST00000419437 CEP350Q5VT06 3117 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 INSRP06213 1382 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 FLT4P35916 1363 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 ZNF784Q8NCA9 323 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
THUMPD3-204ENST00000419437 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
THUMPD3-204ENST00000419437 TUBGCP6Q96RT7 1819 aa16.03■□□□□ 0.16
THUMPD3-204ENST00000419437 RGPD2P0DJD1 1756 aa16.03■□□□□ 0.16
THUMPD3-204ENST00000419437 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
THUMPD3-204ENST00000419437 RAPGEF4Q8WZA2 1011 aa16.02■□□□□ 0.16
THUMPD3-204ENST00000419437 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
THUMPD3-204ENST00000419437 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
THUMPD3-204ENST00000419437 WASHC2AQ641Q2 1341 aa16.01■□□□□ 0.15
THUMPD3-204ENST00000419437 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
THUMPD3-204ENST00000419437 POLD1P28340 1107 aa15.99■□□□□ 0.15
THUMPD3-204ENST00000419437 NSD2O96028 1365 aa15.99■□□□□ 0.15
THUMPD3-204ENST00000419437 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
THUMPD3-204ENST00000419437 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
THUMPD3-204ENST00000419437 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
THUMPD3-204ENST00000419437 EYA1Q99502 592 aa15.98■□□□□ 0.15
THUMPD3-204ENST00000419437 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
THUMPD3-204ENST00000419437 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
THUMPD3-204ENST00000419437 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
THUMPD3-204ENST00000419437 MEGF6O75095 1541 aa15.97■□□□□ 0.15
THUMPD3-204ENST00000419437 PER1O15534 1290 aaPredicted RBP15.96■□□□□ 0.15
THUMPD3-204ENST00000419437 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
THUMPD3-204ENST00000419437 EIF4A2Q14240 407 aaKnown RBP15.96■□□□□ 0.15
THUMPD3-204ENST00000419437 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
THUMPD3-204ENST00000419437 GPR162Q16538 588 aa15.95■□□□□ 0.14
THUMPD3-204ENST00000419437 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
THUMPD3-204ENST00000419437 C5P01031 1676 aa15.94■□□□□ 0.14
THUMPD3-204ENST00000419437 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
THUMPD3-204ENST00000419437 TAF1LQ8IZX4 1826 aa15.92■□□□□ 0.14
THUMPD3-204ENST00000419437 CYP27B1O15528 508 aa15.91■□□□□ 0.14
THUMPD3-204ENST00000419437 KCNQ4P56696 695 aa15.91■□□□□ 0.14
THUMPD3-204ENST00000419437 SPG7Q9UQ90 795 aa15.91■□□□□ 0.14
THUMPD3-204ENST00000419437 C1QTNF8P60827 252 aa15.9■□□□□ 0.14
THUMPD3-204ENST00000419437 ANKRD26Q9UPS8 1709 aa15.9■□□□□ 0.14
THUMPD3-204ENST00000419437 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
THUMPD3-204ENST00000419437 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
THUMPD3-204ENST00000419437 MTHFSP49914 203 aa15.89■□□□□ 0.13
THUMPD3-204ENST00000419437 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
THUMPD3-204ENST00000419437 ITGB4P16144 1822 aa15.89■□□□□ 0.13
THUMPD3-204ENST00000419437 PKD1L3Q7Z443 1732 aa15.88■□□□□ 0.13
THUMPD3-204ENST00000419437 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
THUMPD3-204ENST00000419437 FLAD1Q8NFF5 587 aa15.88■□□□□ 0.13
THUMPD3-204ENST00000419437 NLGN2Q8NFZ4 835 aa15.88■□□□□ 0.13
THUMPD3-204ENST00000419437 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
THUMPD3-204ENST00000419437 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
THUMPD3-204ENST00000419437 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
THUMPD3-204ENST00000419437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.13
THUMPD3-204ENST00000419437 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
THUMPD3-204ENST00000419437 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 MSH5O43196 834 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 IL13P35225 146 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 SULT6B1Q6IMI4 303 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 IFNL2Q8IZJ0 200 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
THUMPD3-204ENST00000419437 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
THUMPD3-204ENST00000419437 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
THUMPD3-204ENST00000419437 PLEKHO1Q53GL0 409 aaPredicted RBP15.84■□□□□ 0.13
THUMPD3-204ENST00000419437 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
THUMPD3-204ENST00000419437 CD2APQ9Y5K6 639 aa15.84■□□□□ 0.13
THUMPD3-204ENST00000419437 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
THUMPD3-204ENST00000419437 PHKG2P15735 406 aa15.83■□□□□ 0.12
THUMPD3-204ENST00000419437 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.12
THUMPD3-204ENST00000419437 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
THUMPD3-204ENST00000419437 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms