RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 NBPF6Q5VWK0 638 aa25.64■■□□□ 1.7
COPS8-204ENST00000419015 NBPF4Q96M43 638 aa25.64■■□□□ 1.7
COPS8-204ENST00000419015 ZCRB1Q8TBF4 217 aaKnown RBP25.63■■□□□ 1.69
COPS8-204ENST00000419015 AKT1S1Q96B36 256 aa25.63■■□□□ 1.69
COPS8-204ENST00000419015 TUBGCP6Q96RT7 1819 aa25.63■■□□□ 1.69
COPS8-204ENST00000419015 SLC27A3Q5K4L6 730 aa25.62■■□□□ 1.69
COPS8-204ENST00000419015 SYT17Q9BSW7 474 aa25.62■■□□□ 1.69
COPS8-204ENST00000419015 FHDC1Q9C0D6 1143 aaPredicted RBP25.62■■□□□ 1.69
COPS8-204ENST00000419015 COL24A1Q17RW2 1714 aa25.61■■□□□ 1.69
COPS8-204ENST00000419015 DCAF8L1A6NGE4 600 aa25.61■■□□□ 1.69
COPS8-204ENST00000419015 PRIM1P49642 420 aaKnown RBP25.61■■□□□ 1.69
COPS8-204ENST00000419015 CDCA8Q53HL2 280 aa25.6■■□□□ 1.69
COPS8-204ENST00000419015 GOLGB1Q14789 3259 aaKnown RBP25.59■■□□□ 1.69
COPS8-204ENST00000419015 INSRP06213 1382 aa25.59■■□□□ 1.69
COPS8-204ENST00000419015 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
COPS8-204ENST00000419015 HSP90AB2PQ58FF8 381 aa25.58■■□□□ 1.69
COPS8-204ENST00000419015 USHBP1Q8N6Y0 703 aa25.58■■□□□ 1.69
COPS8-204ENST00000419015 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.69
COPS8-204ENST00000419015 CGNL1Q0VF96 1302 aa25.58■■□□□ 1.69
COPS8-204ENST00000419015 KIF24Q5T7B8 1368 aa25.57■■□□□ 1.68
COPS8-204ENST00000419015 SMG6Q86US8 1419 aaKnown RBP25.57■■□□□ 1.68
COPS8-204ENST00000419015 FLT4P35916 1363 aa25.56■■□□□ 1.68
COPS8-204ENST00000419015 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
COPS8-204ENST00000419015 KCNQ4P56696 695 aa25.55■■□□□ 1.68
COPS8-204ENST00000419015 ARXQ96QS3 562 aa25.55■■□□□ 1.68
COPS8-204ENST00000419015 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
COPS8-204ENST00000419015 PNPLA7Q6ZV29 1317 aa25.55■■□□□ 1.68
COPS8-204ENST00000419015 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
COPS8-204ENST00000419015 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
COPS8-204ENST00000419015 SLC16A10Q8TF71 515 aa25.53■■□□□ 1.68
COPS8-204ENST00000419015 RAPGEF4Q8WZA2 1011 aa25.53■■□□□ 1.68
COPS8-204ENST00000419015 TATP17735 454 aaPredicted RBP25.5■■□□□ 1.67
COPS8-204ENST00000419015 CHD4Q14839 1912 aa25.5■■□□□ 1.67
COPS8-204ENST00000419015 NCAPD2Q15021 1401 aa25.5■■□□□ 1.67
COPS8-204ENST00000419015 PKD1L3Q7Z443 1732 aa25.5■■□□□ 1.67
COPS8-204ENST00000419015 EMILIN1Q9Y6C2 1016 aa25.5■■□□□ 1.67
COPS8-204ENST00000419015 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
COPS8-204ENST00000419015 TOGARAM1Q9Y4F4 1720 aa25.49■■□□□ 1.67
COPS8-204ENST00000419015 TFCP2L1Q9NZI6 479 aa25.49■■□□□ 1.67
COPS8-204ENST00000419015 PCDH11XQ9BZA7 1347 aa25.48■■□□□ 1.67
COPS8-204ENST00000419015 PCDH11YQ9BZA8 1340 aa25.48■■□□□ 1.67
COPS8-204ENST00000419015 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
COPS8-204ENST00000419015 CCNL1Q9UK58 526 aaPredicted RBP25.48■■□□□ 1.67
COPS8-204ENST00000419015 ITGB4P16144 1822 aa25.47■■□□□ 1.67
COPS8-204ENST00000419015 TAF1LQ8IZX4 1826 aa25.47■■□□□ 1.67
COPS8-204ENST00000419015 C5P01031 1676 aa25.46■■□□□ 1.67
COPS8-204ENST00000419015 CYP27B1O15528 508 aa25.46■■□□□ 1.67
COPS8-204ENST00000419015 WASHC2AQ641Q2 1341 aa25.42■■□□□ 1.66
COPS8-204ENST00000419015 POLD1P28340 1107 aa25.41■■□□□ 1.66
COPS8-204ENST00000419015 COL23A1Q86Y22 540 aaPredicted RBP25.4■■□□□ 1.66
COPS8-204ENST00000419015 PALLDQ8WX93 1383 aa25.39■■□□□ 1.65
COPS8-204ENST00000419015 NKX1-1Q15270 411 aaPredicted RBP25.38■■□□□ 1.65
COPS8-204ENST00000419015 MPRIPQ6WCQ1 1025 aa25.38■■□□□ 1.65
COPS8-204ENST00000419015 ZNF784Q8NCA9 323 aaPredicted RBP25.38■■□□□ 1.65
COPS8-204ENST00000419015 POLKQ9UBT6 870 aa25.38■■□□□ 1.65
COPS8-204ENST00000419015 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
COPS8-204ENST00000419015 EYA1Q99502 592 aa25.37■■□□□ 1.65
COPS8-204ENST00000419015 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
COPS8-204ENST00000419015 C4BP0C0L5 1744 aa25.34■■□□□ 1.65
COPS8-204ENST00000419015 NLGN2Q8NFZ4 835 aa25.34■■□□□ 1.65
COPS8-204ENST00000419015 UBR3Q6ZT12 1888 aa25.33■■□□□ 1.65
COPS8-204ENST00000419015 KLHL34Q8N239 644 aa25.33■■□□□ 1.65
COPS8-204ENST00000419015 PIGBQ92521 554 aa25.33■■□□□ 1.65
COPS8-204ENST00000419015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.33■■□□□ 1.65
COPS8-204ENST00000419015 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
COPS8-204ENST00000419015 GPR162Q16538 588 aa25.31■■□□□ 1.64
COPS8-204ENST00000419015 SMARCC1Q92922 1105 aaPredicted RBP25.31■■□□□ 1.64
COPS8-204ENST00000419015 MSH5O43196 834 aa25.3■■□□□ 1.64
COPS8-204ENST00000419015 HMGB2P26583 209 aaKnown RBP25.3■■□□□ 1.64
COPS8-204ENST00000419015 AMIGO3Q86WK7 504 aa25.3■■□□□ 1.64
COPS8-204ENST00000419015 EIF4A2Q14240 407 aaKnown RBP25.29■■□□□ 1.64
COPS8-204ENST00000419015 POLR3GLQ9BT43 218 aa25.29■■□□□ 1.64
COPS8-204ENST00000419015 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
COPS8-204ENST00000419015 MSL1Q68DK7 614 aa25.28■■□□□ 1.64
COPS8-204ENST00000419015 FLAD1Q8NFF5 587 aa25.28■■□□□ 1.64
COPS8-204ENST00000419015 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
COPS8-204ENST00000419015 PHKG2P15735 406 aa25.27■■□□□ 1.64
COPS8-204ENST00000419015 PLEKHG2Q9H7P9 1386 aa25.27■■□□□ 1.64
COPS8-204ENST00000419015 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
COPS8-204ENST00000419015 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
COPS8-204ENST00000419015 IGSF1Q8N6C5 1336 aa25.24■■□□□ 1.63
COPS8-204ENST00000419015 LOC102724428A0A0B4J2F2 783 aa25.24■■□□□ 1.63
COPS8-204ENST00000419015 SIK1P57059 783 aa25.24■■□□□ 1.63
COPS8-204ENST00000419015 PANK3Q9H999 370 aa25.24■■□□□ 1.63
COPS8-204ENST00000419015 YBX3P16989 372 aaKnown RBP eCLIP25.23■■□□□ 1.63
COPS8-204ENST00000419015 AK7Q96M32 723 aa25.23■■□□□ 1.63
COPS8-204ENST00000419015 ASAP1Q9ULH1 1129 aa25.23■■□□□ 1.63
COPS8-204ENST00000419015 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
COPS8-204ENST00000419015 LINC00116Q8NCU8 138 aa25.22■■□□□ 1.63
COPS8-204ENST00000419015 TMOD3Q9NYL9 352 aa25.22■■□□□ 1.63
COPS8-204ENST00000419015 SMIM5Q71RC9 77 aa25.21■■□□□ 1.63
COPS8-204ENST00000419015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.2■■□□□ 1.62
COPS8-204ENST00000419015 CD2APQ9Y5K6 639 aa25.2■■□□□ 1.62
COPS8-204ENST00000419015 SSFA2P28290 1259 aa25.19■■□□□ 1.62
COPS8-204ENST00000419015 ITPK1Q13572 414 aa25.19■■□□□ 1.62
COPS8-204ENST00000419015 ATG3Q9NT62 314 aa25.19■■□□□ 1.62
COPS8-204ENST00000419015 ZNF831Q5JPB2 1677 aa25.18■■□□□ 1.62
COPS8-204ENST00000419015 PHF14O94880 888 aa25.18■■□□□ 1.62
COPS8-204ENST00000419015 KDRP35968 1356 aa25.17■■□□□ 1.62
COPS8-204ENST00000419015 GRIN3BO60391 1043 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms