RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
HMGA1P6-201ENST00000418454 AAMPQ13685 434 aa13.08□□□□□ -0.32
HMGA1P6-201ENST00000418454 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
HMGA1P6-201ENST00000418454 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
HMGA1P6-201ENST00000418454 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
HMGA1P6-201ENST00000418454 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 MS4A1P11836 297 aa13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 COL5A2P05997 1499 aaPredicted RBP13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 SPATA31A6Q5VVP1 1343 aa13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 JCADQ9P266 1359 aa13.07□□□□□ -0.32
HMGA1P6-201ENST00000418454 CRB1P82279 1406 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 ABCA3Q99758 1704 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 EVA1CP58658 441 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 COL14A1Q05707 1796 aaKnown RBP13.06□□□□□ -0.32
HMGA1P6-201ENST00000418454 CHRNA2Q15822 529 aa13.05□□□□□ -0.32
HMGA1P6-201ENST00000418454 RARSP54136 660 aaKnown RBP13.04□□□□□ -0.32
HMGA1P6-201ENST00000418454 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
HMGA1P6-201ENST00000418454 PIP4K2BP78356 416 aa13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 FKBP8Q14318 412 aa13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
HMGA1P6-201ENST00000418454 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 VAMP4O75379 141 aa13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 HOXB7P09629 217 aa13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 IL2RBP14784 551 aa13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
HMGA1P6-201ENST00000418454 MCM10Q7L590 875 aa13.01□□□□□ -0.33
HMGA1P6-201ENST00000418454 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
HMGA1P6-201ENST00000418454 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
HMGA1P6-201ENST00000418454 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
HMGA1P6-201ENST00000418454 ADAMTS7Q9UKP4 1686 aa13□□□□□ -0.33
HMGA1P6-201ENST00000418454 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
HMGA1P6-201ENST00000418454 PHKG2P15735 406 aa13□□□□□ -0.33
HMGA1P6-201ENST00000418454 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
HMGA1P6-201ENST00000418454 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
HMGA1P6-201ENST00000418454 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 TEFQ10587 303 aa12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 TWISTNBQ3B726 338 aaPredicted RBP12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
HMGA1P6-201ENST00000418454 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 DCTN1Q14203 1278 aa12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 CHMP4BQ9H444 224 aaKnown RBP12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 LAS1LQ9Y4W2 734 aaKnown RBP12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 SLIT2O94813 1529 aa12.98□□□□□ -0.33
HMGA1P6-201ENST00000418454 PKD1L3Q7Z443 1732 aa12.97□□□□□ -0.33
HMGA1P6-201ENST00000418454 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
HMGA1P6-201ENST00000418454 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
HMGA1P6-201ENST00000418454 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
HMGA1P6-201ENST00000418454 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
HMGA1P6-201ENST00000418454 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
HMGA1P6-201ENST00000418454 MEGF6O75095 1541 aa12.96□□□□□ -0.33
HMGA1P6-201ENST00000418454 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
HMGA1P6-201ENST00000418454 BCAR3O75815 825 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 UNC5CLQ8IV45 518 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 LGR6Q9HBX8 967 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
HMGA1P6-201ENST00000418454 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 CYP27B1O15528 508 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 VPS72Q15906 364 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
HMGA1P6-201ENST00000418454 PTPRCP08575 1304 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 SPATA31A5Q5VU36 1347 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 SPATA31A7Q8IWB4 1347 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 MRC1P22897 1456 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 EXOC5O00471 708 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
HMGA1P6-201ENST00000418454 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms