RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 USP54Q70EL1 1684 aa17.74■□□□□ 0.43
HLA-DMB-258ENST00000418107 LTN1O94822 1766 aa17.73■□□□□ 0.43
HLA-DMB-258ENST00000418107 ZNF827Q17R98 1081 aa17.73■□□□□ 0.43
HLA-DMB-258ENST00000418107 TERF2IPQ9NYB0 399 aa17.73■□□□□ 0.43
HLA-DMB-258ENST00000418107 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
HLA-DMB-258ENST00000418107 ARXQ96QS3 562 aa17.72■□□□□ 0.43
HLA-DMB-258ENST00000418107 BTAF1O14981 1849 aa17.72■□□□□ 0.43
HLA-DMB-258ENST00000418107 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
HLA-DMB-258ENST00000418107 CARD14Q9BXL6 1004 aa17.71■□□□□ 0.43
HLA-DMB-258ENST00000418107 LRRC4BQ9NT99 713 aa17.71■□□□□ 0.43
HLA-DMB-258ENST00000418107 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.42
HLA-DMB-258ENST00000418107 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
HLA-DMB-258ENST00000418107 AMER1Q5JTC6 1135 aaPredicted RBP17.7■□□□□ 0.42
HLA-DMB-258ENST00000418107 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
HLA-DMB-258ENST00000418107 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
HLA-DMB-258ENST00000418107 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
HLA-DMB-258ENST00000418107 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
HLA-DMB-258ENST00000418107 NPC1L1Q9UHC9 1359 aa17.68■□□□□ 0.42
HLA-DMB-258ENST00000418107 KAT6BQ8WYB5 2073 aa17.67■□□□□ 0.42
HLA-DMB-258ENST00000418107 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
HLA-DMB-258ENST00000418107 MAP3K5Q99683 1374 aa17.67■□□□□ 0.42
HLA-DMB-258ENST00000418107 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
HLA-DMB-258ENST00000418107 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
HLA-DMB-258ENST00000418107 IP6K1Q92551 441 aa17.66■□□□□ 0.42
HLA-DMB-258ENST00000418107 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
HLA-DMB-258ENST00000418107 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
HLA-DMB-258ENST00000418107 CHD4Q14839 1912 aa17.64■□□□□ 0.41
HLA-DMB-258ENST00000418107 KCNQ4P56696 695 aa17.64■□□□□ 0.41
HLA-DMB-258ENST00000418107 SLC27A3Q5K4L6 730 aa17.64■□□□□ 0.41
HLA-DMB-258ENST00000418107 PNPLA7Q6ZV29 1317 aa17.63■□□□□ 0.41
HLA-DMB-258ENST00000418107 GPR162Q16538 588 aa17.63■□□□□ 0.41
HLA-DMB-258ENST00000418107 SYTL4Q96C24 671 aaPredicted RBP17.63■□□□□ 0.41
HLA-DMB-258ENST00000418107 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
HLA-DMB-258ENST00000418107 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
HLA-DMB-258ENST00000418107 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
HLA-DMB-258ENST00000418107 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
HLA-DMB-258ENST00000418107 POLD1P28340 1107 aa17.61■□□□□ 0.41
HLA-DMB-258ENST00000418107 PRIM1P49642 420 aaKnown RBP17.61■□□□□ 0.41
HLA-DMB-258ENST00000418107 TFCP2L1Q9NZI6 479 aa17.61■□□□□ 0.41
HLA-DMB-258ENST00000418107 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
HLA-DMB-258ENST00000418107 NSD2O96028 1365 aa17.6■□□□□ 0.41
HLA-DMB-258ENST00000418107 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
HLA-DMB-258ENST00000418107 FBLN1P23142 703 aa17.6■□□□□ 0.41
HLA-DMB-258ENST00000418107 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
HLA-DMB-258ENST00000418107 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
HLA-DMB-258ENST00000418107 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 HOXC9P31274 260 aa17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 C1QTNF8P60827 252 aa17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 COG3Q96JB2 828 aa17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 DOT1LQ8TEK3 1739 aa17.59■□□□□ 0.41
HLA-DMB-258ENST00000418107 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.41
HLA-DMB-258ENST00000418107 MEGF6O75095 1541 aa17.58■□□□□ 0.4
HLA-DMB-258ENST00000418107 AMPHP49418 695 aa17.57■□□□□ 0.4
HLA-DMB-258ENST00000418107 NLGN2Q8NFZ4 835 aa17.57■□□□□ 0.4
HLA-DMB-258ENST00000418107 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
HLA-DMB-258ENST00000418107 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
HLA-DMB-258ENST00000418107 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
HLA-DMB-258ENST00000418107 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
HLA-DMB-258ENST00000418107 CCNL1Q9UK58 526 aaPredicted RBP17.55■□□□□ 0.4
HLA-DMB-258ENST00000418107 LY75O60449 1722 aa17.55■□□□□ 0.4
HLA-DMB-258ENST00000418107 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
HLA-DMB-258ENST00000418107 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
HLA-DMB-258ENST00000418107 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
HLA-DMB-258ENST00000418107 FYB1O15117 783 aa17.53■□□□□ 0.4
HLA-DMB-258ENST00000418107 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
HLA-DMB-258ENST00000418107 MSH5O43196 834 aa17.53■□□□□ 0.4
HLA-DMB-258ENST00000418107 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
HLA-DMB-258ENST00000418107 USHBP1Q8N6Y0 703 aa17.53■□□□□ 0.4
HLA-DMB-258ENST00000418107 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.39
HLA-DMB-258ENST00000418107 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.39
HLA-DMB-258ENST00000418107 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.39
HLA-DMB-258ENST00000418107 NBPF4Q96M43 638 aa17.52■□□□□ 0.39
HLA-DMB-258ENST00000418107 RTL1A6NKG5 1358 aa17.51■□□□□ 0.39
HLA-DMB-258ENST00000418107 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
HLA-DMB-258ENST00000418107 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
HLA-DMB-258ENST00000418107 MSL1Q68DK7 614 aa17.5■□□□□ 0.39
HLA-DMB-258ENST00000418107 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
HLA-DMB-258ENST00000418107 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
HLA-DMB-258ENST00000418107 MTHFSP49914 203 aa17.47■□□□□ 0.39
HLA-DMB-258ENST00000418107 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
HLA-DMB-258ENST00000418107 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
HLA-DMB-258ENST00000418107 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
HLA-DMB-258ENST00000418107 C5P01031 1676 aa17.45■□□□□ 0.38
HLA-DMB-258ENST00000418107 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
HLA-DMB-258ENST00000418107 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
HLA-DMB-258ENST00000418107 PCDH11XQ9BZA7 1347 aa17.44■□□□□ 0.38
HLA-DMB-258ENST00000418107 PCDH11YQ9BZA8 1340 aa17.44■□□□□ 0.38
HLA-DMB-258ENST00000418107 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
HLA-DMB-258ENST00000418107 INSRP06213 1382 aa17.43■□□□□ 0.38
HLA-DMB-258ENST00000418107 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
HLA-DMB-258ENST00000418107 CEP350Q5VT06 3117 aa17.43■□□□□ 0.38
HLA-DMB-258ENST00000418107 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
HLA-DMB-258ENST00000418107 CYP27B1O15528 508 aa17.41■□□□□ 0.38
HLA-DMB-258ENST00000418107 FLT4P35916 1363 aa17.41■□□□□ 0.38
HLA-DMB-258ENST00000418107 ATP10DQ9P241 1426 aa17.41■□□□□ 0.38
HLA-DMB-258ENST00000418107 PPM1GO15355 546 aaPredicted RBP17.4■□□□□ 0.38
HLA-DMB-258ENST00000418107 FLAD1Q8NFF5 587 aa17.4■□□□□ 0.38
HLA-DMB-258ENST00000418107 CD2APQ9Y5K6 639 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms