RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 AMPHP49418 695 aa23.05■■□□□ 1.28
PRPF18-203ENST00000417658 KCNQ4P56696 695 aa23.03■■□□□ 1.28
PRPF18-203ENST00000417658 TESK2Q96S53 571 aa23.03■■□□□ 1.28
PRPF18-203ENST00000417658 KLHL34Q8N239 644 aa23.02■■□□□ 1.28
PRPF18-203ENST00000417658 NSD2O96028 1365 aa23.01■■□□□ 1.27
PRPF18-203ENST00000417658 SENP3-EIF4A1A0A087X0R7 540 aa23.01■■□□□ 1.27
PRPF18-203ENST00000417658 CGNL1Q0VF96 1302 aa23.01■■□□□ 1.27
PRPF18-203ENST00000417658 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
PRPF18-203ENST00000417658 LY75O60449 1722 aa23■■□□□ 1.27
PRPF18-203ENST00000417658 FBLN1P23142 703 aa23■■□□□ 1.27
PRPF18-203ENST00000417658 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
PRPF18-203ENST00000417658 ST20-MTHFSA0A0A6YYL1 179 aa22.99■■□□□ 1.27
PRPF18-203ENST00000417658 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
PRPF18-203ENST00000417658 RTL1A6NKG5 1358 aa22.98■■□□□ 1.27
PRPF18-203ENST00000417658 GRIN3BO60391 1043 aa22.97■■□□□ 1.27
PRPF18-203ENST00000417658 NBPF6Q5VWK0 638 aa22.97■■□□□ 1.27
PRPF18-203ENST00000417658 PELP1Q8IZL8 1130 aaKnown RBP22.97■■□□□ 1.27
PRPF18-203ENST00000417658 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
PRPF18-203ENST00000417658 NBPF4Q96M43 638 aa22.97■■□□□ 1.27
PRPF18-203ENST00000417658 USP47Q96K76 1375 aa22.97■■□□□ 1.27
PRPF18-203ENST00000417658 MEGF6O75095 1541 aa22.97■■□□□ 1.27
PRPF18-203ENST00000417658 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
PRPF18-203ENST00000417658 TUBGCP6Q96RT7 1819 aa22.96■■□□□ 1.27
PRPF18-203ENST00000417658 COL23A1Q86Y22 540 aaPredicted RBP22.96■■□□□ 1.27
PRPF18-203ENST00000417658 GOLGB1Q14789 3259 aaKnown RBP22.95■■□□□ 1.26
PRPF18-203ENST00000417658 RGPD2P0DJD1 1756 aa22.94■■□□□ 1.26
PRPF18-203ENST00000417658 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
PRPF18-203ENST00000417658 FYB1O15117 783 aa22.94■■□□□ 1.26
PRPF18-203ENST00000417658 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
PRPF18-203ENST00000417658 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
PRPF18-203ENST00000417658 MSH5O43196 834 aa22.93■■□□□ 1.26
PRPF18-203ENST00000417658 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
PRPF18-203ENST00000417658 YBX3P16989 372 aaKnown RBP eCLIP22.91■■□□□ 1.26
PRPF18-203ENST00000417658 TATP17735 454 aaPredicted RBP22.91■■□□□ 1.26
PRPF18-203ENST00000417658 FLAD1Q8NFF5 587 aa22.91■■□□□ 1.26
PRPF18-203ENST00000417658 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
PRPF18-203ENST00000417658 USHBP1Q8N6Y0 703 aa22.89■■□□□ 1.25
PRPF18-203ENST00000417658 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.25
PRPF18-203ENST00000417658 CD2APQ9Y5K6 639 aa22.89■■□□□ 1.25
PRPF18-203ENST00000417658 INSRP06213 1382 aa22.89■■□□□ 1.25
PRPF18-203ENST00000417658 PCDH11XQ9BZA7 1347 aa22.88■■□□□ 1.25
PRPF18-203ENST00000417658 PCDH11YQ9BZA8 1340 aa22.88■■□□□ 1.25
PRPF18-203ENST00000417658 KIF24Q5T7B8 1368 aa22.88■■□□□ 1.25
PRPF18-203ENST00000417658 TMF1P82094 1093 aa22.87■■□□□ 1.25
PRPF18-203ENST00000417658 HSP90AB2PQ58FF8 381 aa22.87■■□□□ 1.25
PRPF18-203ENST00000417658 MSL1Q68DK7 614 aa22.85■■□□□ 1.25
PRPF18-203ENST00000417658 MPRIPQ6WCQ1 1025 aa22.84■■□□□ 1.25
PRPF18-203ENST00000417658 SMARCC1Q92922 1105 aaPredicted RBP22.84■■□□□ 1.25
PRPF18-203ENST00000417658 FLT4P35916 1363 aa22.84■■□□□ 1.25
PRPF18-203ENST00000417658 PALLDQ8WX93 1383 aa22.84■■□□□ 1.25
PRPF18-203ENST00000417658 CYP27B1O15528 508 aa22.83■■□□□ 1.25
PRPF18-203ENST00000417658 C5P01031 1676 aa22.83■■□□□ 1.24
PRPF18-203ENST00000417658 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
PRPF18-203ENST00000417658 TAF1LQ8IZX4 1826 aa22.8■■□□□ 1.24
PRPF18-203ENST00000417658 NKX1-1Q15270 411 aaPredicted RBP22.79■■□□□ 1.24
PRPF18-203ENST00000417658 AK7Q96M32 723 aa22.78■■□□□ 1.24
PRPF18-203ENST00000417658 PIGBQ92521 554 aa22.77■■□□□ 1.24
PRPF18-203ENST00000417658 NSD3Q9BZ95 1437 aa22.76■■□□□ 1.23
PRPF18-203ENST00000417658 ATP10DQ9P241 1426 aa22.76■■□□□ 1.23
PRPF18-203ENST00000417658 C4BP0C0L5 1744 aa22.75■■□□□ 1.23
PRPF18-203ENST00000417658 GPBP1L1Q9HC44 474 aaPredicted RBP22.75■■□□□ 1.23
PRPF18-203ENST00000417658 SPG7Q9UQ90 795 aa22.75■■□□□ 1.23
PRPF18-203ENST00000417658 ITGB4P16144 1822 aa22.74■■□□□ 1.23
PRPF18-203ENST00000417658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
PRPF18-203ENST00000417658 SSFA2P28290 1259 aa22.74■■□□□ 1.23
PRPF18-203ENST00000417658 CARD14Q9BXL6 1004 aa22.74■■□□□ 1.23
PRPF18-203ENST00000417658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.74■■□□□ 1.23
PRPF18-203ENST00000417658 EMILIN1Q9Y6C2 1016 aa22.74■■□□□ 1.23
PRPF18-203ENST00000417658 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
PRPF18-203ENST00000417658 CEP350Q5VT06 3117 aa22.73■■□□□ 1.23
PRPF18-203ENST00000417658 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
PRPF18-203ENST00000417658 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
PRPF18-203ENST00000417658 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
PRPF18-203ENST00000417658 SIK1P57059 783 aa22.72■■□□□ 1.23
PRPF18-203ENST00000417658 ADCY9O60503 1353 aa22.72■■□□□ 1.23
PRPF18-203ENST00000417658 PKD1L3Q7Z443 1732 aa22.71■■□□□ 1.23
PRPF18-203ENST00000417658 WASHC2AQ641Q2 1341 aa22.71■■□□□ 1.23
PRPF18-203ENST00000417658 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
PRPF18-203ENST00000417658 PHF14O94880 888 aa22.7■■□□□ 1.22
PRPF18-203ENST00000417658 IFFO2Q5TF58 517 aa22.7■■□□□ 1.22
PRPF18-203ENST00000417658 IGSF1Q8N6C5 1336 aa22.7■■□□□ 1.22
PRPF18-203ENST00000417658 UBR3Q6ZT12 1888 aa22.7■■□□□ 1.22
PRPF18-203ENST00000417658 PPM1GO15355 546 aaPredicted RBP22.69■■□□□ 1.22
PRPF18-203ENST00000417658 TMOD3Q9NYL9 352 aa22.69■■□□□ 1.22
PRPF18-203ENST00000417658 SMIM5Q71RC9 77 aa22.68■■□□□ 1.22
PRPF18-203ENST00000417658 LINC00116Q8NCU8 138 aa22.68■■□□□ 1.22
PRPF18-203ENST00000417658 EYA1Q99502 592 aa22.68■■□□□ 1.22
PRPF18-203ENST00000417658 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
PRPF18-203ENST00000417658 IFNL2Q8IZJ0 200 aa22.66■■□□□ 1.22
PRPF18-203ENST00000417658 ASAP1Q9ULH1 1129 aa22.66■■□□□ 1.22
PRPF18-203ENST00000417658 HSPA6P17066 643 aa22.65■■□□□ 1.22
PRPF18-203ENST00000417658 ATP6V1AP38606 617 aa22.65■■□□□ 1.22
PRPF18-203ENST00000417658 GNPATO15228 680 aa22.64■■□□□ 1.21
PRPF18-203ENST00000417658 PHKG2P15735 406 aa22.64■■□□□ 1.21
PRPF18-203ENST00000417658 ITPK1Q13572 414 aa22.64■■□□□ 1.21
PRPF18-203ENST00000417658 ZNF526Q8TF50 670 aaPredicted RBP22.63■■□□□ 1.21
PRPF18-203ENST00000417658 POLKQ9UBT6 870 aa22.63■■□□□ 1.21
PRPF18-203ENST00000417658 ANKRD26Q9UPS8 1709 aa22.62■■□□□ 1.21
PRPF18-203ENST00000417658 ATG3Q9NT62 314 aa22.62■■□□□ 1.21
PRPF18-203ENST00000417658 PLEKHG2Q9H7P9 1386 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms