RNA–Protein interactions for RNA: ENST00000417345.2

CNTFR-203, Transcript of ciliary neurotrophic factor receptor, humanhuman

TSL 3

Gene CNTFR, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-203ENST00000417345 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
CNTFR-203ENST00000417345 SPG7Q9UQ90 795 aa18.43■□□□□ 0.54
CNTFR-203ENST00000417345 PKD1L3Q7Z443 1732 aa18.43■□□□□ 0.54
CNTFR-203ENST00000417345 NEFMP07197 916 aa18.42■□□□□ 0.54
CNTFR-203ENST00000417345 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
CNTFR-203ENST00000417345 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
CNTFR-203ENST00000417345 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
CNTFR-203ENST00000417345 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
CNTFR-203ENST00000417345 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
CNTFR-203ENST00000417345 HMOX1P09601 288 aa18.41■□□□□ 0.54
CNTFR-203ENST00000417345 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.54
CNTFR-203ENST00000417345 KDRP35968 1356 aa18.41■□□□□ 0.54
CNTFR-203ENST00000417345 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
CNTFR-203ENST00000417345 PNNQ9H307 717 aaKnown RBP18.4■□□□□ 0.54
CNTFR-203ENST00000417345 AMOTQ4VCS5 1084 aa18.39■□□□□ 0.53
CNTFR-203ENST00000417345 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
CNTFR-203ENST00000417345 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
CNTFR-203ENST00000417345 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
CNTFR-203ENST00000417345 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
CNTFR-203ENST00000417345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
CNTFR-203ENST00000417345 SRCAPQ6ZRS2 3230 aa18.39■□□□□ 0.53
CNTFR-203ENST00000417345 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
CNTFR-203ENST00000417345 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
CNTFR-203ENST00000417345 C1orf141Q5JVX7 400 aa18.36■□□□□ 0.53
CNTFR-203ENST00000417345 FCHSD2O94868 740 aa18.35■□□□□ 0.53
CNTFR-203ENST00000417345 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
CNTFR-203ENST00000417345 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
CNTFR-203ENST00000417345 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
CNTFR-203ENST00000417345 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
CNTFR-203ENST00000417345 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
CNTFR-203ENST00000417345 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.52
CNTFR-203ENST00000417345 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
CNTFR-203ENST00000417345 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
CNTFR-203ENST00000417345 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.52
CNTFR-203ENST00000417345 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
CNTFR-203ENST00000417345 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
CNTFR-203ENST00000417345 RSPH6AQ9H0K4 717 aa18.32■□□□□ 0.52
CNTFR-203ENST00000417345 SBF2Q86WG5 1849 aa18.32■□□□□ 0.52
CNTFR-203ENST00000417345 BCL9O00512 1426 aa18.32■□□□□ 0.52
CNTFR-203ENST00000417345 CCDC125Q86Z20 511 aa18.31■□□□□ 0.52
CNTFR-203ENST00000417345 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
CNTFR-203ENST00000417345 PHKG2P15735 406 aa18.29■□□□□ 0.52
CNTFR-203ENST00000417345 CYP27B1O15528 508 aa18.28■□□□□ 0.52
CNTFR-203ENST00000417345 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
CNTFR-203ENST00000417345 TRIM37O94972 964 aa18.27■□□□□ 0.52
CNTFR-203ENST00000417345 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
CNTFR-203ENST00000417345 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
CNTFR-203ENST00000417345 ACSBG1Q96GR2 724 aa18.26■□□□□ 0.51
CNTFR-203ENST00000417345 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
CNTFR-203ENST00000417345 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
CNTFR-203ENST00000417345 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
CNTFR-203ENST00000417345 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
CNTFR-203ENST00000417345 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
CNTFR-203ENST00000417345 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
CNTFR-203ENST00000417345 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
CNTFR-203ENST00000417345 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
CNTFR-203ENST00000417345 BAG6P46379 1132 aa18.24■□□□□ 0.51
CNTFR-203ENST00000417345 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
CNTFR-203ENST00000417345 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
CNTFR-203ENST00000417345 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
CNTFR-203ENST00000417345 BTAF1O14981 1849 aa18.23■□□□□ 0.51
CNTFR-203ENST00000417345 ITGB4P16144 1822 aa18.23■□□□□ 0.51
CNTFR-203ENST00000417345 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
CNTFR-203ENST00000417345 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
CNTFR-203ENST00000417345 EP400Q96L91 3159 aa18.22■□□□□ 0.51
CNTFR-203ENST00000417345 APBA3O96018 575 aa18.22■□□□□ 0.51
CNTFR-203ENST00000417345 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
CNTFR-203ENST00000417345 PHACTR3Q96KR7 559 aa18.22■□□□□ 0.51
CNTFR-203ENST00000417345 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
CNTFR-203ENST00000417345 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
CNTFR-203ENST00000417345 LMOD3Q0VAK6 560 aa18.21■□□□□ 0.51
CNTFR-203ENST00000417345 MPRIPQ6WCQ1 1025 aa18.21■□□□□ 0.51
CNTFR-203ENST00000417345 RGPD3A6NKT7 1758 aaPredicted RBP18.21■□□□□ 0.51
CNTFR-203ENST00000417345 RGPD4Q7Z3J3 1758 aa18.21■□□□□ 0.51
CNTFR-203ENST00000417345 DLG5Q8TDM6 1919 aa18.21■□□□□ 0.51
CNTFR-203ENST00000417345 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
CNTFR-203ENST00000417345 CABP4P57796 275 aa18.2■□□□□ 0.5
CNTFR-203ENST00000417345 NFE2L2Q16236 605 aa18.2■□□□□ 0.5
CNTFR-203ENST00000417345 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
CNTFR-203ENST00000417345 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
CNTFR-203ENST00000417345 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
CNTFR-203ENST00000417345 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
CNTFR-203ENST00000417345 TEFQ10587 303 aa18.19■□□□□ 0.5
CNTFR-203ENST00000417345 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
CNTFR-203ENST00000417345 KCNQ2O43526 872 aa18.18■□□□□ 0.5
CNTFR-203ENST00000417345 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
CNTFR-203ENST00000417345 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
CNTFR-203ENST00000417345 MIER1Q8N108 512 aa18.17■□□□□ 0.5
CNTFR-203ENST00000417345 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
CNTFR-203ENST00000417345 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
CNTFR-203ENST00000417345 MRC1P22897 1456 aa18.15■□□□□ 0.5
CNTFR-203ENST00000417345 RIPK4P57078 832 aa18.15■□□□□ 0.5
CNTFR-203ENST00000417345 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
CNTFR-203ENST00000417345 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
CNTFR-203ENST00000417345 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
CNTFR-203ENST00000417345 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
CNTFR-203ENST00000417345 PLSCR1O15162 318 aa18.13■□□□□ 0.49
CNTFR-203ENST00000417345 PIGBQ92521 554 aa18.13■□□□□ 0.49
CNTFR-203ENST00000417345 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
CNTFR-203ENST00000417345 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms