RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 ANKRD36BQ8N2N9 1353 aa12.73□□□□□ -0.37
SMIM12-201ENST00000417239 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
SMIM12-201ENST00000417239 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
SMIM12-201ENST00000417239 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
SMIM12-201ENST00000417239 APLP1P51693 650 aa12.72□□□□□ -0.37
SMIM12-201ENST00000417239 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
SMIM12-201ENST00000417239 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
SMIM12-201ENST00000417239 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
SMIM12-201ENST00000417239 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
SMIM12-201ENST00000417239 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
SMIM12-201ENST00000417239 MSH5O43196 834 aa12.7□□□□□ -0.38
SMIM12-201ENST00000417239 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
SMIM12-201ENST00000417239 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
SMIM12-201ENST00000417239 ITGB4P16144 1822 aa12.69□□□□□ -0.38
SMIM12-201ENST00000417239 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
SMIM12-201ENST00000417239 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
SMIM12-201ENST00000417239 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
SMIM12-201ENST00000417239 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
SMIM12-201ENST00000417239 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
SMIM12-201ENST00000417239 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
SMIM12-201ENST00000417239 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
SMIM12-201ENST00000417239 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
SMIM12-201ENST00000417239 IGSF1Q8N6C5 1336 aa12.67□□□□□ -0.38
SMIM12-201ENST00000417239 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
SMIM12-201ENST00000417239 TOMM70O94826 608 aa12.66□□□□□ -0.38
SMIM12-201ENST00000417239 MEGF6O75095 1541 aa12.66□□□□□ -0.38
SMIM12-201ENST00000417239 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
SMIM12-201ENST00000417239 CAPN15O75808 1086 aa12.65□□□□□ -0.38
SMIM12-201ENST00000417239 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
SMIM12-201ENST00000417239 USP47Q96K76 1375 aa12.65□□□□□ -0.38
SMIM12-201ENST00000417239 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
SMIM12-201ENST00000417239 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.39
SMIM12-201ENST00000417239 NME9Q86XW9 330 aa12.64□□□□□ -0.39
SMIM12-201ENST00000417239 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
SMIM12-201ENST00000417239 PRELPP51888 382 aa12.63□□□□□ -0.39
SMIM12-201ENST00000417239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMIM12-201ENST00000417239 TNRC6CQ9HCJ0 1690 aaKnown RBP12.63□□□□□ -0.39
SMIM12-201ENST00000417239 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
SMIM12-201ENST00000417239 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
SMIM12-201ENST00000417239 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
SMIM12-201ENST00000417239 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
SMIM12-201ENST00000417239 TNS4Q8IZW8 715 aa12.61□□□□□ -0.39
SMIM12-201ENST00000417239 HTRA3P83110 453 aa12.6□□□□□ -0.39
SMIM12-201ENST00000417239 IP6K1Q92551 441 aa12.6□□□□□ -0.39
SMIM12-201ENST00000417239 NMRK2Q9NPI5 230 aa12.6□□□□□ -0.39
SMIM12-201ENST00000417239 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
SMIM12-201ENST00000417239 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
SMIM12-201ENST00000417239 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
SMIM12-201ENST00000417239 SBF1O95248 1867 aa12.59□□□□□ -0.39
SMIM12-201ENST00000417239 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
SMIM12-201ENST00000417239 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
SMIM12-201ENST00000417239 NSD3Q9BZ95 1437 aa12.58□□□□□ -0.4
SMIM12-201ENST00000417239 C4AP0C0L4 1744 aa12.56□□□□□ -0.4
SMIM12-201ENST00000417239 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
SMIM12-201ENST00000417239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
SMIM12-201ENST00000417239 SMIM5Q71RC9 77 aa12.55□□□□□ -0.4
SMIM12-201ENST00000417239 AK7Q96M32 723 aa12.55□□□□□ -0.4
SMIM12-201ENST00000417239 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
SMIM12-201ENST00000417239 KCPQ6ZWJ8 1503 aa12.54□□□□□ -0.4
SMIM12-201ENST00000417239 PHF14O94880 888 aa12.54□□□□□ -0.4
SMIM12-201ENST00000417239 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
SMIM12-201ENST00000417239 HOXC9P31274 260 aa12.54□□□□□ -0.4
SMIM12-201ENST00000417239 FSTL1Q12841 308 aa12.54□□□□□ -0.4
SMIM12-201ENST00000417239 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
SMIM12-201ENST00000417239 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
SMIM12-201ENST00000417239 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
SMIM12-201ENST00000417239 SSFA2P28290 1259 aa12.53□□□□□ -0.4
SMIM12-201ENST00000417239 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
SMIM12-201ENST00000417239 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
SMIM12-201ENST00000417239 ROCK2O75116 1388 aaKnown RBP12.53□□□□□ -0.4
SMIM12-201ENST00000417239 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
SMIM12-201ENST00000417239 SLC34A2O95436 690 aa12.51□□□□□ -0.41
SMIM12-201ENST00000417239 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
SMIM12-201ENST00000417239 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
SMIM12-201ENST00000417239 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
SMIM12-201ENST00000417239 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
SMIM12-201ENST00000417239 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
SMIM12-201ENST00000417239 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
SMIM12-201ENST00000417239 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
SMIM12-201ENST00000417239 MMP10P09238 476 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 TGFB2P61812 414 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 NBPF6Q5VWK0 638 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 SLC12A5Q9H2X9 1139 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 KIF20BQ96Q89 1820 aa12.5□□□□□ -0.41
SMIM12-201ENST00000417239 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 A0A0G2JLW4 131 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 HSPA1AP0DMV8 641 aaKnown RBP12.49□□□□□ -0.41
SMIM12-201ENST00000417239 HSPA1BP0DMV9 641 aaKnown RBP12.49□□□□□ -0.41
SMIM12-201ENST00000417239 FBLN1P23142 703 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 AMPHP49418 695 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 TMC1Q8TDI8 760 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
SMIM12-201ENST00000417239 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
SMIM12-201ENST00000417239 KDM2BQ8NHM5 1336 aa12.48□□□□□ -0.41
SMIM12-201ENST00000417239 C9orf131Q5VYM1 1079 aa12.48□□□□□ -0.41
SMIM12-201ENST00000417239 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms