RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 U2SURPO15042 1029 aaKnown RBP28.77■■■□□ 2.2
HMCES-203ENST00000417226 KDRP35968 1356 aa28.75■■■□□ 2.19
HMCES-203ENST00000417226 MARCH10Q8NA82 808 aaPredicted RBP28.75■■■□□ 2.19
HMCES-203ENST00000417226 ANP32CO43423 234 aa28.74■■■□□ 2.19
HMCES-203ENST00000417226 HMOX1P09601 288 aa28.74■■■□□ 2.19
HMCES-203ENST00000417226 ZCRB1Q8TBF4 217 aaKnown RBP28.74■■■□□ 2.19
HMCES-203ENST00000417226 NUDCQ9Y266 331 aa28.72■■■□□ 2.19
HMCES-203ENST00000417226 DDX54Q8TDD1 881 aaKnown RBP28.72■■■□□ 2.19
HMCES-203ENST00000417226 FAM196AQ6ZSG2 479 aa28.7■■■□□ 2.18
HMCES-203ENST00000417226 SOCS7O14512 581 aa28.69■■■□□ 2.18
HMCES-203ENST00000417226 SBF2Q86WG5 1849 aa28.69■■■□□ 2.18
HMCES-203ENST00000417226 PCDH11XQ9BZA7 1347 aa28.68■■■□□ 2.18
HMCES-203ENST00000417226 PCDH11YQ9BZA8 1340 aa28.68■■■□□ 2.18
HMCES-203ENST00000417226 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
HMCES-203ENST00000417226 U2AF1L5P0DN76 240 aaPredicted RBP28.67■■■□□ 2.18
HMCES-203ENST00000417226 U2AF1Q01081 240 aaKnown RBP eCLIP28.67■■■□□ 2.18
HMCES-203ENST00000417226 KAT6BQ8WYB5 2073 aa28.67■■■□□ 2.18
HMCES-203ENST00000417226 SPG7Q9UQ90 795 aa28.66■■■□□ 2.18
HMCES-203ENST00000417226 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
HMCES-203ENST00000417226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.65■■■□□ 2.18
HMCES-203ENST00000417226 BCL9O00512 1426 aa28.63■■■□□ 2.17
HMCES-203ENST00000417226 DOT1LQ8TEK3 1739 aa28.62■■■□□ 2.17
HMCES-203ENST00000417226 TNS1Q9HBL0 1735 aaKnown RBP28.62■■■□□ 2.17
HMCES-203ENST00000417226 CYP27B1O15528 508 aa28.62■■■□□ 2.17
HMCES-203ENST00000417226 AMOTQ4VCS5 1084 aa28.61■■■□□ 2.17
HMCES-203ENST00000417226 PLEKHO1Q53GL0 409 aaPredicted RBP28.61■■■□□ 2.17
HMCES-203ENST00000417226 TRIM37O94972 964 aa28.6■■■□□ 2.17
HMCES-203ENST00000417226 RSPH6AQ9H0K4 717 aa28.6■■■□□ 2.17
HMCES-203ENST00000417226 NHSQ6T4R5 1651 aa28.6■■■□□ 2.17
HMCES-203ENST00000417226 PRKAR2BP31323 418 aa28.59■■■□□ 2.17
HMCES-203ENST00000417226 ZNF530Q6P9A1 599 aaPredicted RBP28.59■■■□□ 2.17
HMCES-203ENST00000417226 PHKG2P15735 406 aa28.57■■■□□ 2.16
HMCES-203ENST00000417226 ACSBG1Q96GR2 724 aa28.57■■■□□ 2.16
HMCES-203ENST00000417226 TOGARAM1Q9Y4F4 1720 aa28.57■■■□□ 2.16
HMCES-203ENST00000417226 FCHSD2O94868 740 aa28.56■■■□□ 2.16
HMCES-203ENST00000417226 IFNL2Q8IZJ0 200 aa28.56■■■□□ 2.16
HMCES-203ENST00000417226 SF3B2Q13435 895 aaKnown RBP28.55■■■□□ 2.16
HMCES-203ENST00000417226 CCDC184Q52MB2 194 aa28.55■■■□□ 2.16
HMCES-203ENST00000417226 WDR43Q15061 677 aaKnown RBP eCLIP28.54■■■□□ 2.16
HMCES-203ENST00000417226 CCDC125Q86Z20 511 aa28.54■■■□□ 2.16
HMCES-203ENST00000417226 C1orf141Q5JVX7 400 aa28.53■■■□□ 2.16
HMCES-203ENST00000417226 KCNQ2O43526 872 aa28.53■■■□□ 2.16
HMCES-203ENST00000417226 MTHFSDQ2M296 383 aaKnown RBP28.53■■■□□ 2.16
HMCES-203ENST00000417226 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
HMCES-203ENST00000417226 PTF1AQ7RTS3 328 aa28.52■■■□□ 2.16
HMCES-203ENST00000417226 BTAF1O14981 1849 aa28.51■■■□□ 2.15
HMCES-203ENST00000417226 ITGB4P16144 1822 aa28.51■■■□□ 2.15
HMCES-203ENST00000417226 VIRMAQ69YN4 1812 aaKnown RBP28.51■■■□□ 2.15
HMCES-203ENST00000417226 NKX1-1Q15270 411 aaPredicted RBP28.51■■■□□ 2.15
HMCES-203ENST00000417226 PHACTR3Q96KR7 559 aa28.51■■■□□ 2.15
HMCES-203ENST00000417226 BCL11BQ9C0K0 894 aaPredicted RBP28.51■■■□□ 2.15
HMCES-203ENST00000417226 SYTL4Q96C24 671 aaPredicted RBP28.5■■■□□ 2.15
HMCES-203ENST00000417226 MRS2Q9HD23 443 aa28.5■■■□□ 2.15
HMCES-203ENST00000417226 PRIM1P49642 420 aaKnown RBP28.48■■■□□ 2.15
HMCES-203ENST00000417226 SCN11AQ9UI33 1791 aa28.48■■■□□ 2.15
HMCES-203ENST00000417226 HSP90AB1P08238 724 aaKnown RBP28.47■■■□□ 2.15
HMCES-203ENST00000417226 AKAP4Q5JQC9 854 aa28.47■■■□□ 2.15
HMCES-203ENST00000417226 GAS2L2Q8NHY3 880 aa28.47■■■□□ 2.15
HMCES-203ENST00000417226 KDM6AO15550 1401 aaPredicted RBP28.47■■■□□ 2.15
HMCES-203ENST00000417226 APBA3O96018 575 aa28.46■■■□□ 2.15
HMCES-203ENST00000417226 NEFMP07197 916 aa28.46■■■□□ 2.15
HMCES-203ENST00000417226 DEFB132Q7Z7B7 95 aa28.46■■■□□ 2.15
HMCES-203ENST00000417226 PLEKHF1Q96S99 279 aa28.46■■■□□ 2.15
HMCES-203ENST00000417226 PNNQ9H307 717 aaKnown RBP28.46■■■□□ 2.15
HMCES-203ENST00000417226 BAG6P46379 1132 aa28.45■■■□□ 2.14
HMCES-203ENST00000417226 MPRIPQ6WCQ1 1025 aa28.45■■■□□ 2.14
HMCES-203ENST00000417226 DCAF5Q96JK2 942 aa28.45■■■□□ 2.14
HMCES-203ENST00000417226 ADAMTS8Q9UP79 889 aa28.45■■■□□ 2.14
HMCES-203ENST00000417226 MAPK8IP3Q9UPT6 1336 aa28.44■■■□□ 2.14
HMCES-203ENST00000417226 DLG5Q8TDM6 1919 aa28.43■■■□□ 2.14
HMCES-203ENST00000417226 MAP3K5Q99683 1374 aa28.43■■■□□ 2.14
HMCES-203ENST00000417226 RGPD3A6NKT7 1758 aaPredicted RBP28.42■■■□□ 2.14
HMCES-203ENST00000417226 RGPD4Q7Z3J3 1758 aa28.42■■■□□ 2.14
HMCES-203ENST00000417226 EN1Q05925 392 aaPredicted RBP28.41■■■□□ 2.14
HMCES-203ENST00000417226 CCDC146Q8IYE0 955 aa28.41■■■□□ 2.14
HMCES-203ENST00000417226 ADAMTS7Q9UKP4 1686 aa28.41■■■□□ 2.14
HMCES-203ENST00000417226 GNAT3A8MTJ3 354 aa28.4■■■□□ 2.14
HMCES-203ENST00000417226 TMOD3Q9NYL9 352 aa28.39■■■□□ 2.13
HMCES-203ENST00000417226 PNISRQ8TF01 805 aaKnown RBP28.38■■■□□ 2.13
HMCES-203ENST00000417226 ERVV-2B6SEH9 535 aa28.37■■■□□ 2.13
HMCES-203ENST00000417226 LGR6Q9HBX8 967 aa28.37■■■□□ 2.13
HMCES-203ENST00000417226 RNMTO43148 476 aaKnown RBP28.36■■■□□ 2.13
HMCES-203ENST00000417226 PIGBQ92521 554 aa28.36■■■□□ 2.13
HMCES-203ENST00000417226 CABP4P57796 275 aa28.35■■■□□ 2.13
HMCES-203ENST00000417226 NFE2L2Q16236 605 aa28.35■■■□□ 2.13
HMCES-203ENST00000417226 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
HMCES-203ENST00000417226 RREB1Q92766 1687 aa28.35■■■□□ 2.13
HMCES-203ENST00000417226 MRC1P22897 1456 aa28.35■■■□□ 2.13
HMCES-203ENST00000417226 EZH2Q15910 746 aaKnown RBP28.34■■■□□ 2.13
HMCES-203ENST00000417226 CAMKK2Q96RR4 588 aa28.34■■■□□ 2.13
HMCES-203ENST00000417226 PLSCR1O15162 318 aa28.34■■■□□ 2.13
HMCES-203ENST00000417226 LY75O60449 1722 aa28.33■■■□□ 2.13
HMCES-203ENST00000417226 RTF1Q92541 710 aaKnown RBP28.32■■■□□ 2.12
HMCES-203ENST00000417226 NFATC2IPQ8NCF5 419 aa28.31■■■□□ 2.12
HMCES-203ENST00000417226 IL17REQ8NFR9 667 aa28.31■■■□□ 2.12
HMCES-203ENST00000417226 NUP188Q5SRE5 1749 aa28.3■■■□□ 2.12
HMCES-203ENST00000417226 SIPA1L3O60292 1781 aaPredicted RBP28.3■■■□□ 2.12
HMCES-203ENST00000417226 MIER1Q8N108 512 aa28.3■■■□□ 2.12
HMCES-203ENST00000417226 SLC52A2Q9HAB3 445 aa28.3■■■□□ 2.12
HMCES-203ENST00000417226 CCER2I3L3R5 266 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms