RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 NWD2Q9ULI1 1742 aa10.78□□□□□ -0.68
MDC1-203ENST00000417033 NCAPD2Q15021 1401 aa10.78□□□□□ -0.68
MDC1-203ENST00000417033 EVA1CP58658 441 aa10.78□□□□□ -0.68
MDC1-203ENST00000417033 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.68
MDC1-203ENST00000417033 SULT6B1Q6IMI4 303 aa10.78□□□□□ -0.68
MDC1-203ENST00000417033 TOM1L2Q6ZVM7 507 aa10.78□□□□□ -0.68
MDC1-203ENST00000417033 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
MDC1-203ENST00000417033 UNC5CLQ8IV45 518 aa10.77□□□□□ -0.69
MDC1-203ENST00000417033 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
MDC1-203ENST00000417033 USP35Q9P2H5 1018 aa10.77□□□□□ -0.69
MDC1-203ENST00000417033 USP21Q9UK80 565 aa10.77□□□□□ -0.69
MDC1-203ENST00000417033 NUDCQ9Y266 331 aa10.77□□□□□ -0.69
MDC1-203ENST00000417033 MEGF6O75095 1541 aa10.77□□□□□ -0.69
MDC1-203ENST00000417033 CRB1P82279 1406 aa10.76□□□□□ -0.69
MDC1-203ENST00000417033 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
MDC1-203ENST00000417033 KDRP35968 1356 aa10.76□□□□□ -0.69
MDC1-203ENST00000417033 ATRNO75882 1429 aa10.75□□□□□ -0.69
MDC1-203ENST00000417033 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.75□□□□□ -0.69
MDC1-203ENST00000417033 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
MDC1-203ENST00000417033 RGS17Q9UGC6 210 aaPredicted RBP10.75□□□□□ -0.69
MDC1-203ENST00000417033 CCDC9Q9Y3X0 531 aaKnown RBP10.75□□□□□ -0.69
MDC1-203ENST00000417033 SPATA31A1Q5TZJ5 1347 aa10.75□□□□□ -0.69
MDC1-203ENST00000417033 SPATA31A5Q5VU36 1347 aa10.75□□□□□ -0.69
MDC1-203ENST00000417033 SPATA31A7Q8IWB4 1347 aa10.75□□□□□ -0.69
MDC1-203ENST00000417033 GLI3P10071 1580 aa10.74□□□□□ -0.69
MDC1-203ENST00000417033 VPS72Q15906 364 aa10.74□□□□□ -0.69
MDC1-203ENST00000417033 PHACTR3Q96KR7 559 aa10.74□□□□□ -0.69
MDC1-203ENST00000417033 PLEKHF1Q96S99 279 aa10.74□□□□□ -0.69
MDC1-203ENST00000417033 DISP2A7MBM2 1401 aa10.74□□□□□ -0.69
MDC1-203ENST00000417033 FCHSD2O94868 740 aa10.72□□□□□ -0.69
MDC1-203ENST00000417033 TCP11L2Q8N4U5 519 aa10.72□□□□□ -0.69
MDC1-203ENST00000417033 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
MDC1-203ENST00000417033 RRP7AQ9Y3A4 280 aaKnown RBP10.72□□□□□ -0.69
MDC1-203ENST00000417033 OVOS2A0A0G2JMS6 1433 aa10.71□□□□□ -0.69
MDC1-203ENST00000417033 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
MDC1-203ENST00000417033 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
MDC1-203ENST00000417033 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.69
MDC1-203ENST00000417033 QTRT2Q9H974 415 aaKnown RBP10.71□□□□□ -0.69
MDC1-203ENST00000417033 TRPC5Q9UL62 973 aaPredicted RBP10.71□□□□□ -0.69
MDC1-203ENST00000417033 APAF1O14727 1248 aa10.7□□□□□ -0.7
MDC1-203ENST00000417033 IL2RBP14784 551 aa10.7□□□□□ -0.7
MDC1-203ENST00000417033 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
MDC1-203ENST00000417033 MTHFSDQ2M296 383 aaKnown RBP10.7□□□□□ -0.7
MDC1-203ENST00000417033 RAPGEF4Q8WZA2 1011 aa10.7□□□□□ -0.7
MDC1-203ENST00000417033 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
MDC1-203ENST00000417033 GJD4Q96KN9 370 aaPredicted RBP10.7□□□□□ -0.7
MDC1-203ENST00000417033 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
MDC1-203ENST00000417033 LRRC37A3O60309 1634 aa10.69□□□□□ -0.7
MDC1-203ENST00000417033 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
MDC1-203ENST00000417033 SHANK3Q9BYB0 1731 aa10.69□□□□□ -0.7
MDC1-203ENST00000417033 THSD7AQ9UPZ6 1657 aa10.69□□□□□ -0.7
MDC1-203ENST00000417033 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
MDC1-203ENST00000417033 PKD1L3Q7Z443 1732 aa10.68□□□□□ -0.7
MDC1-203ENST00000417033 PARP4Q9UKK3 1724 aaKnown RBP10.68□□□□□ -0.7
MDC1-203ENST00000417033 TMPOP42166 694 aaKnown RBP10.68□□□□□ -0.7
MDC1-203ENST00000417033 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
MDC1-203ENST00000417033 ZNF772Q68DY9 489 aaPredicted RBP10.68□□□□□ -0.7
MDC1-203ENST00000417033 BARGINQ6ZT62 677 aa10.68□□□□□ -0.7
MDC1-203ENST00000417033 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
MDC1-203ENST00000417033 CYP27B1O15528 508 aa10.67□□□□□ -0.7
MDC1-203ENST00000417033 NFE2L2Q16236 605 aa10.67□□□□□ -0.7
MDC1-203ENST00000417033 ZNF530Q6P9A1 599 aaPredicted RBP10.67□□□□□ -0.7
MDC1-203ENST00000417033 THUMPD2Q9BTF0 503 aaKnown RBP10.67□□□□□ -0.7
MDC1-203ENST00000417033 THRAP3Q9Y2W1 955 aaKnown RBP10.67□□□□□ -0.7
MDC1-203ENST00000417033 A0A0G2JS52 829 aa10.66□□□□□ -0.7
MDC1-203ENST00000417033 HNRNPUQ00839 825 aaKnown RBP eCLIP10.66□□□□□ -0.7
MDC1-203ENST00000417033 MYT1Q01538 1121 aa10.66□□□□□ -0.7
MDC1-203ENST00000417033 DCTN1Q14203 1278 aa10.66□□□□□ -0.7
MDC1-203ENST00000417033 PLEKHO1Q53GL0 409 aaPredicted RBP10.66□□□□□ -0.7
MDC1-203ENST00000417033 RGS12O14924 1447 aa10.66□□□□□ -0.7
MDC1-203ENST00000417033 SEPT12Q8IYM1 358 aa10.65□□□□□ -0.7
MDC1-203ENST00000417033 ZCRB1Q8TBF4 217 aaKnown RBP10.65□□□□□ -0.7
MDC1-203ENST00000417033 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
MDC1-203ENST00000417033 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
MDC1-203ENST00000417033 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
MDC1-203ENST00000417033 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
MDC1-203ENST00000417033 PHKG2P15735 406 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
MDC1-203ENST00000417033 RIPK4P57078 832 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
MDC1-203ENST00000417033 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 MCM10Q7L590 875 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 GAS2L2Q8NHY3 880 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
MDC1-203ENST00000417033 ONECUT3O60422 494 aaPredicted RBP10.63□□□□□ -0.71
MDC1-203ENST00000417033 NEFMP07197 916 aa10.63□□□□□ -0.71
MDC1-203ENST00000417033 RXRBP28702 533 aa10.63□□□□□ -0.71
MDC1-203ENST00000417033 DDB1Q16531 1140 aa10.63□□□□□ -0.71
MDC1-203ENST00000417033 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
MDC1-203ENST00000417033 MPRIPQ6WCQ1 1025 aa10.63□□□□□ -0.71
MDC1-203ENST00000417033 MARCH10Q8NA82 808 aaPredicted RBP10.63□□□□□ -0.71
MDC1-203ENST00000417033 PNNQ9H307 717 aaKnown RBP10.63□□□□□ -0.71
MDC1-203ENST00000417033 LGR6Q9HBX8 967 aa10.63□□□□□ -0.71
MDC1-203ENST00000417033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■■□□□ 11.4
MDC1-203ENST00000417033 PCDH11XQ9BZA7 1347 aa10.62□□□□□ -0.71
MDC1-203ENST00000417033 PCDH11YQ9BZA8 1340 aa10.62□□□□□ -0.71
MDC1-203ENST00000417033 TOGARAM1Q9Y4F4 1720 aa10.62□□□□□ -0.71
MDC1-203ENST00000417033 EXOC5O00471 708 aa10.62□□□□□ -0.71
MDC1-203ENST00000417033 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms