RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ANKRD24Q8TF21 1146 aa13.72□□□□□ -0.21
SMPD4P1-201ENST00000416717 KRT24Q2M2I5 525 aa13.71□□□□□ -0.21
SMPD4P1-201ENST00000416717 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
SMPD4P1-201ENST00000416717 GAS2L2Q8NHY3 880 aa13.71□□□□□ -0.21
SMPD4P1-201ENST00000416717 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.21
SMPD4P1-201ENST00000416717 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.21
SMPD4P1-201ENST00000416717 PXDNQ92626 1479 aa13.71□□□□□ -0.21
SMPD4P1-201ENST00000416717 TNS3Q68CZ2 1445 aa13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 VAMP4O75379 141 aa13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 SKAP1Q86WV1 359 aa13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
SMPD4P1-201ENST00000416717 GNAT3A8MTJ3 354 aa13.69□□□□□ -0.22
SMPD4P1-201ENST00000416717 TRIM27P14373 513 aa13.68□□□□□ -0.22
SMPD4P1-201ENST00000416717 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
SMPD4P1-201ENST00000416717 CRB1P82279 1406 aa13.68□□□□□ -0.22
SMPD4P1-201ENST00000416717 CHL1O00533 1208 aa13.67□□□□□ -0.22
SMPD4P1-201ENST00000416717 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
SMPD4P1-201ENST00000416717 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
SMPD4P1-201ENST00000416717 ATF7IPQ6VMQ6 1270 aa13.66□□□□□ -0.22
SMPD4P1-201ENST00000416717 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
SMPD4P1-201ENST00000416717 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
SMPD4P1-201ENST00000416717 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 ITPRIPQ8IWB1 547 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 ERBB3P21860 1342 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 MVPQ14764 893 aaKnown RBP13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
SMPD4P1-201ENST00000416717 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
SMPD4P1-201ENST00000416717 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
SMPD4P1-201ENST00000416717 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
SMPD4P1-201ENST00000416717 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
SMPD4P1-201ENST00000416717 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
SMPD4P1-201ENST00000416717 COL18A1P39060 1754 aa13.64□□□□□ -0.23
SMPD4P1-201ENST00000416717 IGHDP01880 384 aa13.63□□□□□ -0.23
SMPD4P1-201ENST00000416717 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
SMPD4P1-201ENST00000416717 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
SMPD4P1-201ENST00000416717 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
SMPD4P1-201ENST00000416717 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 PLEKHO1Q53GL0 409 aaPredicted RBP13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 MS4A1P11836 297 aa13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
SMPD4P1-201ENST00000416717 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
SMPD4P1-201ENST00000416717 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
SMPD4P1-201ENST00000416717 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
SMPD4P1-201ENST00000416717 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
SMPD4P1-201ENST00000416717 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
SMPD4P1-201ENST00000416717 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 NHSL1Q5SYE7 1610 aa13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 DDX19BQ9UMR2 479 aa13.59□□□□□ -0.23
SMPD4P1-201ENST00000416717 NCAPD2Q15021 1401 aa13.58□□□□□ -0.23
SMPD4P1-201ENST00000416717 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
SMPD4P1-201ENST00000416717 ABCA3Q99758 1704 aa13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 TEFQ10587 303 aa13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 CPDO75976 1380 aa13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 RGS3P49796 1198 aa13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
SMPD4P1-201ENST00000416717 CEMIPQ8WUJ3 1361 aa13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 TATP17735 454 aaPredicted RBP13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 RNMTO43148 476 aaKnown RBP13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 KCNQ3O43525 872 aa13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 MEGF6O75095 1541 aa13.56□□□□□ -0.24
SMPD4P1-201ENST00000416717 G2E3Q7L622 706 aa13.55□□□□□ -0.24
SMPD4P1-201ENST00000416717 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
SMPD4P1-201ENST00000416717 AAMPQ13685 434 aa13.55□□□□□ -0.24
SMPD4P1-201ENST00000416717 TOM1L2Q6ZVM7 507 aa13.55□□□□□ -0.24
SMPD4P1-201ENST00000416717 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
SMPD4P1-201ENST00000416717 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
SMPD4P1-201ENST00000416717 ABCC4O15439 1325 aa13.54□□□□□ -0.24
SMPD4P1-201ENST00000416717 ZBTB40Q9NUA8 1239 aa13.53□□□□□ -0.24
SMPD4P1-201ENST00000416717 LTBP4Q8N2S1 1624 aa13.53□□□□□ -0.24
SMPD4P1-201ENST00000416717 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
SMPD4P1-201ENST00000416717 EIF2S2P20042 333 aaKnown RBP13.53□□□□□ -0.24
SMPD4P1-201ENST00000416717 STK31Q9BXU1 1019 aa13.53□□□□□ -0.24
SMPD4P1-201ENST00000416717 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
SMPD4P1-201ENST00000416717 SPG7Q9UQ90 795 aa13.52□□□□□ -0.24
SMPD4P1-201ENST00000416717 F6X3S4 739 aa13.52□□□□□ -0.25
SMPD4P1-201ENST00000416717 ZBTB7BO15156 539 aaPredicted RBP13.52□□□□□ -0.25
SMPD4P1-201ENST00000416717 EVA1CP58658 441 aa13.52□□□□□ -0.25
SMPD4P1-201ENST00000416717 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
SMPD4P1-201ENST00000416717 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms