RNA–Protein interactions for RNA: ENST00000416636.2

CLK2P1-201, Transcript of CDC like kinase 2, pseudogene 1, humanhuman

BASIC

Gene CLK2P1, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P1-201ENST00000416636 PDGFDQ9GZP0 370 aaPredicted RBP17.26■□□□□ 0.35
CLK2P1-201ENST00000416636 SPON1Q9HCB6 807 aa17.26■□□□□ 0.35
CLK2P1-201ENST00000416636 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
CLK2P1-201ENST00000416636 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
CLK2P1-201ENST00000416636 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
CLK2P1-201ENST00000416636 LY75O60449 1722 aa17.24■□□□□ 0.35
CLK2P1-201ENST00000416636 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
CLK2P1-201ENST00000416636 STK32BQ9NY57 414 aa17.24■□□□□ 0.35
CLK2P1-201ENST00000416636 EMILIN1Q9Y6C2 1016 aa17.24■□□□□ 0.35
CLK2P1-201ENST00000416636 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
CLK2P1-201ENST00000416636 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
CLK2P1-201ENST00000416636 LRRC4BQ9NT99 713 aa17.22■□□□□ 0.35
CLK2P1-201ENST00000416636 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
CLK2P1-201ENST00000416636 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
CLK2P1-201ENST00000416636 NSD2O96028 1365 aa17.21■□□□□ 0.35
CLK2P1-201ENST00000416636 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
CLK2P1-201ENST00000416636 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
CLK2P1-201ENST00000416636 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
CLK2P1-201ENST00000416636 TUBGCP6Q96RT7 1819 aa17.2■□□□□ 0.34
CLK2P1-201ENST00000416636 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
CLK2P1-201ENST00000416636 ITGB4P16144 1822 aa17.19■□□□□ 0.34
CLK2P1-201ENST00000416636 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
CLK2P1-201ENST00000416636 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
CLK2P1-201ENST00000416636 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
CLK2P1-201ENST00000416636 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
CLK2P1-201ENST00000416636 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
CLK2P1-201ENST00000416636 PPP1R1BQ9UD71 204 aaPredicted RBP17.18■□□□□ 0.34
CLK2P1-201ENST00000416636 PTGER2P43116 358 aa17.17■□□□□ 0.34
CLK2P1-201ENST00000416636 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
CLK2P1-201ENST00000416636 SLC27A3Q5K4L6 730 aa17.17■□□□□ 0.34
CLK2P1-201ENST00000416636 PANK3Q9H999 370 aa17.17■□□□□ 0.34
CLK2P1-201ENST00000416636 TOGARAM1Q9Y4F4 1720 aa17.17■□□□□ 0.34
CLK2P1-201ENST00000416636 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
CLK2P1-201ENST00000416636 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
CLK2P1-201ENST00000416636 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
CLK2P1-201ENST00000416636 CYP27B1O15528 508 aa17.15■□□□□ 0.34
CLK2P1-201ENST00000416636 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
CLK2P1-201ENST00000416636 EYA1Q99502 592 aa17.15■□□□□ 0.34
CLK2P1-201ENST00000416636 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.34
CLK2P1-201ENST00000416636 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
CLK2P1-201ENST00000416636 KCNQ4P56696 695 aa17.14■□□□□ 0.33
CLK2P1-201ENST00000416636 SGIP1Q9BQI5 828 aa17.14■□□□□ 0.33
CLK2P1-201ENST00000416636 MTFR1LQ9H019 292 aa17.14■□□□□ 0.33
CLK2P1-201ENST00000416636 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
CLK2P1-201ENST00000416636 C5P01031 1676 aa17.11■□□□□ 0.33
CLK2P1-201ENST00000416636 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
CLK2P1-201ENST00000416636 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
CLK2P1-201ENST00000416636 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
CLK2P1-201ENST00000416636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLK2P1-201ENST00000416636 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
CLK2P1-201ENST00000416636 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
CLK2P1-201ENST00000416636 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
CLK2P1-201ENST00000416636 KIF7Q2M1P5 1343 aa17.07■□□□□ 0.32
CLK2P1-201ENST00000416636 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
CLK2P1-201ENST00000416636 FHDC1Q9C0D6 1143 aaPredicted RBP17.07■□□□□ 0.32
CLK2P1-201ENST00000416636 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
CLK2P1-201ENST00000416636 PALLDQ8WX93 1383 aa17.06■□□□□ 0.32
CLK2P1-201ENST00000416636 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
CLK2P1-201ENST00000416636 SYT17Q9BSW7 474 aa17.06■□□□□ 0.32
CLK2P1-201ENST00000416636 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
CLK2P1-201ENST00000416636 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
CLK2P1-201ENST00000416636 ARXQ96QS3 562 aa17.05■□□□□ 0.32
CLK2P1-201ENST00000416636 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
CLK2P1-201ENST00000416636 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
CLK2P1-201ENST00000416636 PIGBQ92521 554 aa17.04■□□□□ 0.32
CLK2P1-201ENST00000416636 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
CLK2P1-201ENST00000416636 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
CLK2P1-201ENST00000416636 PHKG2P15735 406 aa17.03■□□□□ 0.32
CLK2P1-201ENST00000416636 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
CLK2P1-201ENST00000416636 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
CLK2P1-201ENST00000416636 UTRNP46939 3433 aa17.02■□□□□ 0.32
CLK2P1-201ENST00000416636 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
CLK2P1-201ENST00000416636 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
CLK2P1-201ENST00000416636 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
CLK2P1-201ENST00000416636 CHD4Q14839 1912 aa17.01■□□□□ 0.31
CLK2P1-201ENST00000416636 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
CLK2P1-201ENST00000416636 HMGB2P26583 209 aaKnown RBP16.99■□□□□ 0.31
CLK2P1-201ENST00000416636 TMOD3Q9NYL9 352 aa16.99■□□□□ 0.31
CLK2P1-201ENST00000416636 YY1P25490 414 aa16.98■□□□□ 0.31
CLK2P1-201ENST00000416636 POLD1P28340 1107 aa16.98■□□□□ 0.31
CLK2P1-201ENST00000416636 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
CLK2P1-201ENST00000416636 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
CLK2P1-201ENST00000416636 GOLGB1Q14789 3259 aaKnown RBP16.98■□□□□ 0.31
CLK2P1-201ENST00000416636 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
CLK2P1-201ENST00000416636 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
CLK2P1-201ENST00000416636 IL13P35225 146 aa16.97■□□□□ 0.31
CLK2P1-201ENST00000416636 SIK1P57059 783 aa16.97■□□□□ 0.31
CLK2P1-201ENST00000416636 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
CLK2P1-201ENST00000416636 KDRP35968 1356 aa16.97■□□□□ 0.31
CLK2P1-201ENST00000416636 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
CLK2P1-201ENST00000416636 MSH5O43196 834 aa16.96■□□□□ 0.31
CLK2P1-201ENST00000416636 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
CLK2P1-201ENST00000416636 AMIGO3Q86WK7 504 aa16.96■□□□□ 0.31
CLK2P1-201ENST00000416636 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
CLK2P1-201ENST00000416636 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.3
CLK2P1-201ENST00000416636 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
CLK2P1-201ENST00000416636 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
CLK2P1-201ENST00000416636 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
CLK2P1-201ENST00000416636 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
CLK2P1-201ENST00000416636 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms