RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ANKRD36BQ8N2N9 1353 aa14.15□□□□□ -0.14
MDC1-202ENST00000416571 TONSLQ96HA7 1378 aa14.15□□□□□ -0.14
MDC1-202ENST00000416571 CAPN15O75808 1086 aa14.15□□□□□ -0.14
MDC1-202ENST00000416571 PUS7Q96PZ0 661 aaKnown RBP14.15□□□□□ -0.14
MDC1-202ENST00000416571 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.15
MDC1-202ENST00000416571 TUBGCP6Q96RT7 1819 aa14.14□□□□□ -0.15
MDC1-202ENST00000416571 PRIM1P49642 420 aaKnown RBP14.14□□□□□ -0.15
MDC1-202ENST00000416571 LY75O60449 1722 aa14.14□□□□□ -0.15
MDC1-202ENST00000416571 COL24A1Q17RW2 1714 aa14.13□□□□□ -0.15
MDC1-202ENST00000416571 MSH5O43196 834 aa14.13□□□□□ -0.15
MDC1-202ENST00000416571 ZCRB1Q8TBF4 217 aaKnown RBP14.13□□□□□ -0.15
MDC1-202ENST00000416571 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
MDC1-202ENST00000416571 MAP3K19Q56UN5 1328 aa14.13□□□□□ -0.15
MDC1-202ENST00000416571 HOXC9P31274 260 aa14.12□□□□□ -0.15
MDC1-202ENST00000416571 KCNQ4P56696 695 aa14.12□□□□□ -0.15
MDC1-202ENST00000416571 CCNL1Q9UK58 526 aaPredicted RBP14.12□□□□□ -0.15
MDC1-202ENST00000416571 SHANK3Q9BYB0 1731 aa14.12□□□□□ -0.15
MDC1-202ENST00000416571 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
MDC1-202ENST00000416571 PCDH10Q9P2E7 1040 aa14.11□□□□□ -0.15
MDC1-202ENST00000416571 USP47Q96K76 1375 aa14.1□□□□□ -0.15
MDC1-202ENST00000416571 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
MDC1-202ENST00000416571 MEGF6O75095 1541 aa14.1□□□□□ -0.15
MDC1-202ENST00000416571 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
MDC1-202ENST00000416571 NLGN2Q8NFZ4 835 aa14.09□□□□□ -0.15
MDC1-202ENST00000416571 NSD2O96028 1365 aa14.09□□□□□ -0.15
MDC1-202ENST00000416571 FBLN1P23142 703 aa14.08□□□□□ -0.16
MDC1-202ENST00000416571 HMGB2P26583 209 aaKnown RBP14.08□□□□□ -0.16
MDC1-202ENST00000416571 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
MDC1-202ENST00000416571 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.16
MDC1-202ENST00000416571 ST20-MTHFSA0A0A6YYL1 179 aa14.07□□□□□ -0.16
MDC1-202ENST00000416571 GRIN3BO60391 1043 aa14.07□□□□□ -0.16
MDC1-202ENST00000416571 C5P01031 1676 aa14.07□□□□□ -0.16
MDC1-202ENST00000416571 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
MDC1-202ENST00000416571 RRS1Q15050 365 aaKnown RBP14.06□□□□□ -0.16
MDC1-202ENST00000416571 COL23A1Q86Y22 540 aaPredicted RBP14.06□□□□□ -0.16
MDC1-202ENST00000416571 TESK2Q96S53 571 aa14.06□□□□□ -0.16
MDC1-202ENST00000416571 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
MDC1-202ENST00000416571 MSL1Q68DK7 614 aa14.05□□□□□ -0.16
MDC1-202ENST00000416571 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
MDC1-202ENST00000416571 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
MDC1-202ENST00000416571 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
MDC1-202ENST00000416571 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
MDC1-202ENST00000416571 PCDH11XQ9BZA7 1347 aa14.04□□□□□ -0.16
MDC1-202ENST00000416571 PCDH11YQ9BZA8 1340 aa14.04□□□□□ -0.16
MDC1-202ENST00000416571 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
MDC1-202ENST00000416571 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
MDC1-202ENST00000416571 PRELPP51888 382 aa14.03□□□□□ -0.16
MDC1-202ENST00000416571 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.16
MDC1-202ENST00000416571 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
MDC1-202ENST00000416571 FYB1O15117 783 aa14.02□□□□□ -0.17
MDC1-202ENST00000416571 TMF1P82094 1093 aa14.02□□□□□ -0.17
MDC1-202ENST00000416571 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
MDC1-202ENST00000416571 INSRP06213 1382 aa14.01□□□□□ -0.17
MDC1-202ENST00000416571 FLT4P35916 1363 aa14.01□□□□□ -0.17
MDC1-202ENST00000416571 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
MDC1-202ENST00000416571 AK7Q96M32 723 aa14□□□□□ -0.17
MDC1-202ENST00000416571 CD2APQ9Y5K6 639 aa14□□□□□ -0.17
MDC1-202ENST00000416571 GOLGB1Q14789 3259 aaKnown RBP14□□□□□ -0.17
MDC1-202ENST00000416571 C4BP0C0L5 1744 aa14□□□□□ -0.17
MDC1-202ENST00000416571 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
MDC1-202ENST00000416571 ITGB4P16144 1822 aa13.99□□□□□ -0.17
MDC1-202ENST00000416571 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
MDC1-202ENST00000416571 HSPA6P17066 643 aa13.99□□□□□ -0.17
MDC1-202ENST00000416571 SMARCC1Q92922 1105 aaPredicted RBP13.99□□□□□ -0.17
MDC1-202ENST00000416571 ATP10DQ9P241 1426 aa13.98□□□□□ -0.17
MDC1-202ENST00000416571 TOGARAM1Q9Y4F4 1720 aa13.98□□□□□ -0.17
MDC1-202ENST00000416571 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
MDC1-202ENST00000416571 COL13A1Q5TAT6 717 aaPredicted RBP13.98□□□□□ -0.17
MDC1-202ENST00000416571 PHF14O94880 888 aa13.97□□□□□ -0.17
MDC1-202ENST00000416571 GPBP1L1Q9HC44 474 aaPredicted RBP13.97□□□□□ -0.17
MDC1-202ENST00000416571 PKD1L3Q7Z443 1732 aa13.97□□□□□ -0.17
MDC1-202ENST00000416571 CYP27B1O15528 508 aa13.96□□□□□ -0.17
MDC1-202ENST00000416571 UBR3Q6ZT12 1888 aa13.95□□□□□ -0.18
MDC1-202ENST00000416571 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
MDC1-202ENST00000416571 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
MDC1-202ENST00000416571 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
MDC1-202ENST00000416571 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
MDC1-202ENST00000416571 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
MDC1-202ENST00000416571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
MDC1-202ENST00000416571 SSFA2P28290 1259 aa13.93□□□□□ -0.18
MDC1-202ENST00000416571 PIGBQ92521 554 aa13.93□□□□□ -0.18
MDC1-202ENST00000416571 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
MDC1-202ENST00000416571 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
MDC1-202ENST00000416571 TNS4Q8IZW8 715 aa13.92□□□□□ -0.18
MDC1-202ENST00000416571 ANKRD26Q9UPS8 1709 aa13.91□□□□□ -0.18
MDC1-202ENST00000416571 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
MDC1-202ENST00000416571 SIK1P57059 783 aa13.91□□□□□ -0.18
MDC1-202ENST00000416571 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
MDC1-202ENST00000416571 MAP2P11137 1827 aaKnown RBP13.91□□□□□ -0.18
MDC1-202ENST00000416571 ADCY9O60503 1353 aa13.91□□□□□ -0.18
MDC1-202ENST00000416571 GNPATO15228 680 aa13.9□□□□□ -0.18
MDC1-202ENST00000416571 ATP6V1AP38606 617 aa13.9□□□□□ -0.18
MDC1-202ENST00000416571 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
MDC1-202ENST00000416571 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
MDC1-202ENST00000416571 NCAPD2Q15021 1401 aa13.9□□□□□ -0.19
MDC1-202ENST00000416571 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
MDC1-202ENST00000416571 LINC00116Q8NCU8 138 aa13.89□□□□□ -0.19
MDC1-202ENST00000416571 CARD14Q9BXL6 1004 aa13.89□□□□□ -0.19
MDC1-202ENST00000416571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■□□□□ 8.6
MDC1-202ENST00000416571 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms