RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 INSRP06213 1382 aa21.02■□□□□ 0.96
UBXN4-203ENST00000416538 FLT4P35916 1363 aa21.02■□□□□ 0.96
UBXN4-203ENST00000416538 USHBP1Q8N6Y0 703 aa21.02■□□□□ 0.96
UBXN4-203ENST00000416538 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
UBXN4-203ENST00000416538 NBPF6Q5VWK0 638 aa21.01■□□□□ 0.95
UBXN4-203ENST00000416538 NBPF4Q96M43 638 aa21.01■□□□□ 0.95
UBXN4-203ENST00000416538 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
UBXN4-203ENST00000416538 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
UBXN4-203ENST00000416538 NCAPD2Q15021 1401 aa21■□□□□ 0.95
UBXN4-203ENST00000416538 NSD2O96028 1365 aa20.99■□□□□ 0.95
UBXN4-203ENST00000416538 EIF4G2P78344 907 aaKnown RBP eCLIP20.99■□□□□ 0.95
UBXN4-203ENST00000416538 TXNRD1Q16881 649 aa20.99■□□□□ 0.95
UBXN4-203ENST00000416538 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
UBXN4-203ENST00000416538 KIF24Q5T7B8 1368 aa20.98■□□□□ 0.95
UBXN4-203ENST00000416538 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
UBXN4-203ENST00000416538 POLR3GLQ9BT43 218 aa20.98■□□□□ 0.95
UBXN4-203ENST00000416538 ITGB4P16144 1822 aa20.98■□□□□ 0.95
UBXN4-203ENST00000416538 QSER1Q2KHR3 1735 aa20.98■□□□□ 0.95
UBXN4-203ENST00000416538 DDX54Q8TDD1 881 aaKnown RBP20.97■□□□□ 0.95
UBXN4-203ENST00000416538 CGNL1Q0VF96 1302 aa20.95■□□□□ 0.94
UBXN4-203ENST00000416538 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
UBXN4-203ENST00000416538 TAF1LQ8IZX4 1826 aa20.91■□□□□ 0.94
UBXN4-203ENST00000416538 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
UBXN4-203ENST00000416538 LRRC4BQ9NT99 713 aa20.91■□□□□ 0.94
UBXN4-203ENST00000416538 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
UBXN4-203ENST00000416538 SLC15A2Q16348 729 aa20.89■□□□□ 0.93
UBXN4-203ENST00000416538 ZNF827Q17R98 1081 aa20.89■□□□□ 0.93
UBXN4-203ENST00000416538 PANK3Q9H999 370 aa20.89■□□□□ 0.93
UBXN4-203ENST00000416538 POLKQ9UBT6 870 aa20.89■□□□□ 0.93
UBXN4-203ENST00000416538 C5P01031 1676 aa20.89■□□□□ 0.93
UBXN4-203ENST00000416538 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
UBXN4-203ENST00000416538 PRIM1P49642 420 aaKnown RBP20.88■□□□□ 0.93
UBXN4-203ENST00000416538 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
UBXN4-203ENST00000416538 RAPGEF4Q8WZA2 1011 aa20.87■□□□□ 0.93
UBXN4-203ENST00000416538 SPON1Q9HCB6 807 aa20.87■□□□□ 0.93
UBXN4-203ENST00000416538 STK32BQ9NY57 414 aa20.87■□□□□ 0.93
UBXN4-203ENST00000416538 TNNT2P45379 298 aaPredicted RBP20.86■□□□□ 0.93
UBXN4-203ENST00000416538 KCNQ4P56696 695 aa20.86■□□□□ 0.93
UBXN4-203ENST00000416538 CYP27B1O15528 508 aa20.85■□□□□ 0.93
UBXN4-203ENST00000416538 ZBTB7AO95365 584 aa20.85■□□□□ 0.93
UBXN4-203ENST00000416538 TATP17735 454 aaPredicted RBP20.85■□□□□ 0.93
UBXN4-203ENST00000416538 SYTL4Q96C24 671 aaPredicted RBP20.85■□□□□ 0.93
UBXN4-203ENST00000416538 KIF7Q2M1P5 1343 aa20.84■□□□□ 0.93
UBXN4-203ENST00000416538 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
UBXN4-203ENST00000416538 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
UBXN4-203ENST00000416538 PTGER2P43116 358 aa20.84■□□□□ 0.93
UBXN4-203ENST00000416538 EYA1Q99502 592 aa20.84■□□□□ 0.93
UBXN4-203ENST00000416538 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
UBXN4-203ENST00000416538 HOXD11P31277 338 aaPredicted RBP20.82■□□□□ 0.92
UBXN4-203ENST00000416538 EIF4A2Q14240 407 aaKnown RBP20.82■□□□□ 0.92
UBXN4-203ENST00000416538 AKT1S1Q96B36 256 aa20.81■□□□□ 0.92
UBXN4-203ENST00000416538 SGIP1Q9BQI5 828 aa20.8■□□□□ 0.92
UBXN4-203ENST00000416538 ATF5Q9Y2D1 282 aaPredicted RBP20.79■□□□□ 0.92
UBXN4-203ENST00000416538 UBR3Q6ZT12 1888 aa20.78■□□□□ 0.92
UBXN4-203ENST00000416538 SLC27A3Q5K4L6 730 aa20.78■□□□□ 0.92
UBXN4-203ENST00000416538 VIRMAQ69YN4 1812 aaKnown RBP20.78■□□□□ 0.92
UBXN4-203ENST00000416538 PNPLA7Q6ZV29 1317 aa20.78■□□□□ 0.92
UBXN4-203ENST00000416538 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
UBXN4-203ENST00000416538 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
UBXN4-203ENST00000416538 C4BP0C0L5 1744 aa20.77■□□□□ 0.92
UBXN4-203ENST00000416538 AMER1Q5JTC6 1135 aaPredicted RBP20.76■□□□□ 0.91
UBXN4-203ENST00000416538 MTFR1LQ9H019 292 aa20.75■□□□□ 0.91
UBXN4-203ENST00000416538 PALLDQ8WX93 1383 aa20.74■□□□□ 0.91
UBXN4-203ENST00000416538 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
UBXN4-203ENST00000416538 NKX1-1Q15270 411 aaPredicted RBP20.73■□□□□ 0.91
UBXN4-203ENST00000416538 MPRIPQ6WCQ1 1025 aa20.72■□□□□ 0.91
UBXN4-203ENST00000416538 MORC1Q86VD1 984 aa20.72■□□□□ 0.91
UBXN4-203ENST00000416538 AEBP1Q8IUX7 1158 aa20.71■□□□□ 0.91
UBXN4-203ENST00000416538 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
UBXN4-203ENST00000416538 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
UBXN4-203ENST00000416538 SCN11AQ9UI33 1791 aa20.7■□□□□ 0.9
UBXN4-203ENST00000416538 PHKG2P15735 406 aa20.7■□□□□ 0.9
UBXN4-203ENST00000416538 PIGBQ92521 554 aa20.7■□□□□ 0.9
UBXN4-203ENST00000416538 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
UBXN4-203ENST00000416538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.7■□□□□ 0.92e-8■□□□□ 11.1
UBXN4-203ENST00000416538 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
UBXN4-203ENST00000416538 KNSTRNQ9Y448 316 aa20.7■□□□□ 0.9
UBXN4-203ENST00000416538 PER1O15534 1290 aaPredicted RBP20.69■□□□□ 0.9
UBXN4-203ENST00000416538 COL5A3P25940 1745 aaPredicted RBP20.69■□□□□ 0.9
UBXN4-203ENST00000416538 FHDC1Q9C0D6 1143 aaPredicted RBP20.68■□□□□ 0.9
UBXN4-203ENST00000416538 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
UBXN4-203ENST00000416538 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
UBXN4-203ENST00000416538 TFCP2L1Q9NZI6 479 aa20.67■□□□□ 0.9
UBXN4-203ENST00000416538 KDRP35968 1356 aa20.67■□□□□ 0.9
UBXN4-203ENST00000416538 COL3A1P02461 1466 aaPredicted RBP20.66■□□□□ 0.9
UBXN4-203ENST00000416538 IFNL2Q8IZJ0 200 aa20.65■□□□□ 0.9
UBXN4-203ENST00000416538 SYT17Q9BSW7 474 aa20.65■□□□□ 0.9
UBXN4-203ENST00000416538 MAP3K5Q99683 1374 aa20.64■□□□□ 0.89
UBXN4-203ENST00000416538 IL13P35225 146 aa20.64■□□□□ 0.89
UBXN4-203ENST00000416538 COL23A1Q86Y22 540 aaPredicted RBP20.64■□□□□ 0.89
UBXN4-203ENST00000416538 ARXQ96QS3 562 aa20.64■□□□□ 0.89
UBXN4-203ENST00000416538 MYH14Q7Z406 1995 aaKnown RBP20.63■□□□□ 0.89
UBXN4-203ENST00000416538 CHD4Q14839 1912 aa20.63■□□□□ 0.89
UBXN4-203ENST00000416538 ASAP1Q9ULH1 1129 aa20.63■□□□□ 0.89
UBXN4-203ENST00000416538 TJP1Q07157 1748 aa20.63■□□□□ 0.89
UBXN4-203ENST00000416538 ADAMTS7Q9UKP4 1686 aa20.63■□□□□ 0.89
UBXN4-203ENST00000416538 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
UBXN4-203ENST00000416538 SLC16A10Q8TF71 515 aa20.62■□□□□ 0.89
UBXN4-203ENST00000416538 CICQ96RK0 1608 aaPredicted RBP20.61■□□□□ 0.89
UBXN4-203ENST00000416538 CC2D1BQ5T0F9 858 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms