RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 U2SURPO15042 1029 aaKnown RBP26.5■■□□□ 1.83
FAM3A-207ENST00000416319 ZCRB1Q8TBF4 217 aaKnown RBP26.5■■□□□ 1.83
FAM3A-207ENST00000416319 BCL9O00512 1426 aa26.48■■□□□ 1.83
FAM3A-207ENST00000416319 MARCH10Q8NA82 808 aaPredicted RBP26.47■■□□□ 1.83
FAM3A-207ENST00000416319 SPG7Q9UQ90 795 aa26.47■■□□□ 1.83
FAM3A-207ENST00000416319 HMOX1P09601 288 aa26.46■■□□□ 1.83
FAM3A-207ENST00000416319 U2AF1L5P0DN76 240 aaPredicted RBP26.46■■□□□ 1.83
FAM3A-207ENST00000416319 U2AF1Q01081 240 aaKnown RBP eCLIP26.46■■□□□ 1.83
FAM3A-207ENST00000416319 AMOTQ4VCS5 1084 aa26.46■■□□□ 1.83
FAM3A-207ENST00000416319 FCHSD2O94868 740 aa26.45■■□□□ 1.82
FAM3A-207ENST00000416319 FAM196AQ6ZSG2 479 aa26.45■■□□□ 1.82
FAM3A-207ENST00000416319 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
FAM3A-207ENST00000416319 PCDH11XQ9BZA7 1347 aa26.44■■□□□ 1.82
FAM3A-207ENST00000416319 PCDH11YQ9BZA8 1340 aa26.44■■□□□ 1.82
FAM3A-207ENST00000416319 PLEKHO1Q53GL0 409 aaPredicted RBP26.44■■□□□ 1.82
FAM3A-207ENST00000416319 DIEXFQ68CQ4 756 aaKnown RBP26.43■■□□□ 1.82
FAM3A-207ENST00000416319 RSPH6AQ9H0K4 717 aa26.43■■□□□ 1.82
FAM3A-207ENST00000416319 EP400Q96L91 3159 aa26.42■■□□□ 1.82
FAM3A-207ENST00000416319 DDX54Q8TDD1 881 aaKnown RBP26.41■■□□□ 1.82
FAM3A-207ENST00000416319 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.82
FAM3A-207ENST00000416319 CYP27B1O15528 508 aa26.39■■□□□ 1.82
FAM3A-207ENST00000416319 FAM182BQ5T319 152 aa26.39■■□□□ 1.82
FAM3A-207ENST00000416319 NKX1-1Q15270 411 aaPredicted RBP26.38■■□□□ 1.81
FAM3A-207ENST00000416319 PNNQ9H307 717 aaKnown RBP26.38■■□□□ 1.81
FAM3A-207ENST00000416319 PRKAR2BP31323 418 aa26.37■■□□□ 1.81
FAM3A-207ENST00000416319 IFNL2Q8IZJ0 200 aa26.37■■□□□ 1.81
FAM3A-207ENST00000416319 WDR43Q15061 677 aaKnown RBP eCLIP26.36■■□□□ 1.81
FAM3A-207ENST00000416319 CCDC125Q86Z20 511 aa26.36■■□□□ 1.81
FAM3A-207ENST00000416319 PHKG2P15735 406 aa26.35■■□□□ 1.81
FAM3A-207ENST00000416319 SHANK3Q9BYB0 1731 aa26.34■■□□□ 1.81
FAM3A-207ENST00000416319 CCDC184Q52MB2 194 aa26.34■■□□□ 1.81
FAM3A-207ENST00000416319 ZNF530Q6P9A1 599 aaPredicted RBP26.34■■□□□ 1.81
FAM3A-207ENST00000416319 MRS2Q9HD23 443 aa26.34■■□□□ 1.81
FAM3A-207ENST00000416319 HSP90AB1P08238 724 aaKnown RBP26.33■■□□□ 1.81
FAM3A-207ENST00000416319 GAS2L2Q8NHY3 880 aa26.33■■□□□ 1.81
FAM3A-207ENST00000416319 PLEKHF1Q96S99 279 aa26.33■■□□□ 1.81
FAM3A-207ENST00000416319 SOCS7O14512 581 aa26.32■■□□□ 1.8
FAM3A-207ENST00000416319 MTHFSDQ2M296 383 aaKnown RBP26.32■■□□□ 1.8
FAM3A-207ENST00000416319 UPF1Q92900 1129 aaKnown RBP eCLIP26.32■■□□□ 1.88e-6■■□□□ 12.8
FAM3A-207ENST00000416319 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
FAM3A-207ENST00000416319 C1orf141Q5JVX7 400 aa26.31■■□□□ 1.8
FAM3A-207ENST00000416319 PNISRQ8TF01 805 aaKnown RBP26.31■■□□□ 1.8
FAM3A-207ENST00000416319 PHACTR3Q96KR7 559 aa26.31■■□□□ 1.8
FAM3A-207ENST00000416319 NEFMP07197 916 aa26.3■■□□□ 1.8
FAM3A-207ENST00000416319 ADAMTS8Q9UP79 889 aa26.3■■□□□ 1.8
FAM3A-207ENST00000416319 CCER2I3L3R5 266 aa26.29■■□□□ 1.8
FAM3A-207ENST00000416319 DCAF5Q96JK2 942 aa26.29■■□□□ 1.8
FAM3A-207ENST00000416319 BCL11BQ9C0K0 894 aaPredicted RBP26.29■■□□□ 1.8
FAM3A-207ENST00000416319 TRIM37O94972 964 aa26.26■■□□□ 1.79
FAM3A-207ENST00000416319 MAPK8IP3Q9UPT6 1336 aa26.25■■□□□ 1.79
FAM3A-207ENST00000416319 ERVV-2B6SEH9 535 aa26.23■■□□□ 1.79
FAM3A-207ENST00000416319 PRIM1P49642 420 aaKnown RBP26.23■■□□□ 1.79
FAM3A-207ENST00000416319 SF3B2Q13435 895 aaKnown RBP26.23■■□□□ 1.79
FAM3A-207ENST00000416319 RUNDC1Q96C34 613 aa26.23■■□□□ 1.79
FAM3A-207ENST00000416319 ACSBG1Q96GR2 724 aa26.23■■□□□ 1.79
FAM3A-207ENST00000416319 MAP3K5Q99683 1374 aa26.22■■□□□ 1.79
FAM3A-207ENST00000416319 GNAT3A8MTJ3 354 aa26.22■■□□□ 1.79
FAM3A-207ENST00000416319 KCNQ2O43526 872 aa26.22■■□□□ 1.79
FAM3A-207ENST00000416319 KDM6AO15550 1401 aaPredicted RBP26.22■■□□□ 1.79
FAM3A-207ENST00000416319 HTATSF1O43719 755 aaKnown RBP26.21■■□□□ 1.79
FAM3A-207ENST00000416319 NHSQ6T4R5 1651 aa26.2■■□□□ 1.78
FAM3A-207ENST00000416319 NFE2L2Q16236 605 aa26.2■■□□□ 1.78
FAM3A-207ENST00000416319 MPRIPQ6WCQ1 1025 aa26.19■■□□□ 1.78
FAM3A-207ENST00000416319 PTF1AQ7RTS3 328 aa26.19■■□□□ 1.78
FAM3A-207ENST00000416319 MIER1Q8N108 512 aa26.19■■□□□ 1.78
FAM3A-207ENST00000416319 SBF2Q86WG5 1849 aa26.17■■□□□ 1.78
FAM3A-207ENST00000416319 PLSCR1O15162 318 aa26.17■■□□□ 1.78
FAM3A-207ENST00000416319 RNMTO43148 476 aaKnown RBP26.17■■□□□ 1.78
FAM3A-207ENST00000416319 APBA3O96018 575 aa26.17■■□□□ 1.78
FAM3A-207ENST00000416319 CCDC146Q8IYE0 955 aa26.17■■□□□ 1.78
FAM3A-207ENST00000416319 SYTL4Q96C24 671 aaPredicted RBP26.17■■□□□ 1.78
FAM3A-207ENST00000416319 BAG6P46379 1132 aa26.16■■□□□ 1.78
FAM3A-207ENST00000416319 DOT1LQ8TEK3 1739 aa26.15■■□□□ 1.78
FAM3A-207ENST00000416319 TMPOP42166 694 aaKnown RBP26.15■■□□□ 1.78
FAM3A-207ENST00000416319 LGR6Q9HBX8 967 aa26.15■■□□□ 1.78
FAM3A-207ENST00000416319 TMOD3Q9NYL9 352 aa26.15■■□□□ 1.78
FAM3A-207ENST00000416319 CEMIPQ8WUJ3 1361 aa26.15■■□□□ 1.78
FAM3A-207ENST00000416319 ADAMTS7Q9UKP4 1686 aa26.15■■□□□ 1.78
FAM3A-207ENST00000416319 TNS1Q9HBL0 1735 aaKnown RBP26.14■■□□□ 1.78
FAM3A-207ENST00000416319 CABP4P57796 275 aa26.14■■□□□ 1.78
FAM3A-207ENST00000416319 IL17REQ8NFR9 667 aa26.14■■□□□ 1.78
FAM3A-207ENST00000416319 PIGBQ92521 554 aa26.14■■□□□ 1.78
FAM3A-207ENST00000416319 RTF1Q92541 710 aaKnown RBP26.14■■□□□ 1.78
FAM3A-207ENST00000416319 TOGARAM1Q9Y4F4 1720 aa26.14■■□□□ 1.77
FAM3A-207ENST00000416319 MRC1P22897 1456 aa26.13■■□□□ 1.77
FAM3A-207ENST00000416319 SLC52A2Q9HAB3 445 aa26.13■■□□□ 1.77
FAM3A-207ENST00000416319 RIPK4P57078 832 aa26.11■■□□□ 1.77
FAM3A-207ENST00000416319 LMOD3Q0VAK6 560 aa26.11■■□□□ 1.77
FAM3A-207ENST00000416319 CAMKK2Q96RR4 588 aa26.11■■□□□ 1.77
FAM3A-207ENST00000416319 NCBP3Q53F19 620 aaKnown RBP26.1■■□□□ 1.77
FAM3A-207ENST00000416319 DEFB132Q7Z7B7 95 aa26.09■■□□□ 1.77
FAM3A-207ENST00000416319 FAM9BQ8IZU0 186 aa26.09■■□□□ 1.77
FAM3A-207ENST00000416319 NFATC2IPQ8NCF5 419 aa26.09■■□□□ 1.77
FAM3A-207ENST00000416319 SMARCC1Q92922 1105 aaPredicted RBP26.09■■□□□ 1.77
FAM3A-207ENST00000416319 APAF1O14727 1248 aa26.08■■□□□ 1.77
FAM3A-207ENST00000416319 EN1Q05925 392 aaPredicted RBP26.08■■□□□ 1.77
FAM3A-207ENST00000416319 TEFQ10587 303 aa26.07■■□□□ 1.76
FAM3A-207ENST00000416319 MCM10Q7L590 875 aa26.07■■□□□ 1.76
FAM3A-207ENST00000416319 SCN11AQ9UI33 1791 aa26.07■■□□□ 1.76
FAM3A-207ENST00000416319 RGPD3A6NKT7 1758 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms