RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 UNC5CLQ8IV45 518 aa11.02□□□□□ -0.65
RBM39-208ENST00000416108 USP35Q9P2H5 1018 aa11.02□□□□□ -0.65
RBM39-208ENST00000416108 USP21Q9UK80 565 aa11.02□□□□□ -0.65
RBM39-208ENST00000416108 SCN11AQ9UI33 1791 aa11.02□□□□□ -0.65
RBM39-208ENST00000416108 SHANK3Q9BYB0 1731 aa11.01□□□□□ -0.65
RBM39-208ENST00000416108 IL2RBP14784 551 aa11.01□□□□□ -0.65
RBM39-208ENST00000416108 PDE3BQ13370 1112 aa11.01□□□□□ -0.65
RBM39-208ENST00000416108 C1orf141Q5JVX7 400 aa11.01□□□□□ -0.65
RBM39-208ENST00000416108 RTF1Q92541 710 aaKnown RBP11.01□□□□□ -0.65
RBM39-208ENST00000416108 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
RBM39-208ENST00000416108 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
RBM39-208ENST00000416108 MEGF6O75095 1541 aa11□□□□□ -0.65
RBM39-208ENST00000416108 CALD1Q05682 793 aaKnown RBP11□□□□□ -0.65
RBM39-208ENST00000416108 CCDC27Q2M243 656 aa11□□□□□ -0.65
RBM39-208ENST00000416108 AFF2P51816 1311 aa11□□□□□ -0.65
RBM39-208ENST00000416108 MTHFSDQ2M296 383 aaKnown RBP10.99□□□□□ -0.65
RBM39-208ENST00000416108 ZNF530Q6P9A1 599 aaPredicted RBP10.99□□□□□ -0.65
RBM39-208ENST00000416108 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
RBM39-208ENST00000416108 CDCA7Q9BWT1 371 aaPredicted RBP10.99□□□□□ -0.65
RBM39-208ENST00000416108 THRAP3Q9Y2W1 955 aaKnown RBP10.99□□□□□ -0.65
RBM39-208ENST00000416108 MAP3K5Q99683 1374 aa10.99□□□□□ -0.65
RBM39-208ENST00000416108 OVOS2A0A0G2JMS6 1433 aa10.99□□□□□ -0.65
RBM39-208ENST00000416108 BCL9LQ86UU0 1499 aa10.99□□□□□ -0.65
RBM39-208ENST00000416108 LRRC37A3O60309 1634 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 GNAT3A8MTJ3 354 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 VPS72Q15906 364 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.654e-31■■■□□ 15.9
RBM39-208ENST00000416108 SPATA31A1Q5TZJ5 1347 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 SPATA31A5Q5VU36 1347 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 SPATA31A7Q8IWB4 1347 aa10.98□□□□□ -0.65
RBM39-208ENST00000416108 HTATSF1O43719 755 aaKnown RBP10.97□□□□□ -0.65
RBM39-208ENST00000416108 AKAP4Q5JQC9 854 aa10.97□□□□□ -0.65
RBM39-208ENST00000416108 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
RBM39-208ENST00000416108 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
RBM39-208ENST00000416108 PCDH11XQ9BZA7 1347 aa10.97□□□□□ -0.65
RBM39-208ENST00000416108 PCDH11YQ9BZA8 1340 aa10.97□□□□□ -0.65
RBM39-208ENST00000416108 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
RBM39-208ENST00000416108 A0A0G2JS52 829 aa10.96□□□□□ -0.65
RBM39-208ENST00000416108 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.65
RBM39-208ENST00000416108 MYT1Q01538 1121 aa10.96□□□□□ -0.65
RBM39-208ENST00000416108 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.65
RBM39-208ENST00000416108 ZCRB1Q8TBF4 217 aaKnown RBP10.96□□□□□ -0.65
RBM39-208ENST00000416108 ITGB4P16144 1822 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 GLI3P10071 1580 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 DISP2A7MBM2 1401 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 ATRNO75882 1429 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 TNS2Q63HR2 1409 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 ZNF521Q96K83 1311 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 E9PSI1 815 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 ZNF772Q68DY9 489 aaPredicted RBP10.95□□□□□ -0.66
RBM39-208ENST00000416108 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
RBM39-208ENST00000416108 IL16Q14005 1332 aa10.94□□□□□ -0.66
RBM39-208ENST00000416108 EXOC5O00471 708 aa10.94□□□□□ -0.66
RBM39-208ENST00000416108 DDB1Q16531 1140 aa10.94□□□□□ -0.66
RBM39-208ENST00000416108 PHF23Q9BUL5 403 aaPredicted RBP10.94□□□□□ -0.66
RBM39-208ENST00000416108 LAS1LQ9Y4W2 734 aaKnown RBP10.94□□□□□ -0.66
RBM39-208ENST00000416108 DOT1LQ8TEK3 1739 aa10.94□□□□□ -0.66
RBM39-208ENST00000416108 THSD7AQ9UPZ6 1657 aa10.94□□□□□ -0.66
RBM39-208ENST00000416108 KDM3BQ7LBC6 1761 aa10.93□□□□□ -0.66
RBM39-208ENST00000416108 PHKG2P15735 406 aa10.93□□□□□ -0.66
RBM39-208ENST00000416108 GNAI1P63096 354 aa10.93□□□□□ -0.66
RBM39-208ENST00000416108 TEFQ10587 303 aa10.93□□□□□ -0.66
RBM39-208ENST00000416108 DCTN1Q14203 1278 aa10.93□□□□□ -0.66
RBM39-208ENST00000416108 MCM10Q7L590 875 aa10.93□□□□□ -0.66
RBM39-208ENST00000416108 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
RBM39-208ENST00000416108 SLFN5Q08AF3 891 aa10.92□□□□□ -0.66
RBM39-208ENST00000416108 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
RBM39-208ENST00000416108 MPRIPQ6WCQ1 1025 aa10.92□□□□□ -0.66
RBM39-208ENST00000416108 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
RBM39-208ENST00000416108 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
RBM39-208ENST00000416108 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
RBM39-208ENST00000416108 QTRT2Q9H974 415 aaKnown RBP10.92□□□□□ -0.66
RBM39-208ENST00000416108 BRWD3Q6RI45 1802 aa10.92□□□□□ -0.66
RBM39-208ENST00000416108 TOGARAM1Q9Y4F4 1720 aa10.92□□□□□ -0.66
RBM39-208ENST00000416108 CACNA1FO60840 1977 aa10.91□□□□□ -0.66
RBM39-208ENST00000416108 RNMTO43148 476 aaKnown RBP10.91□□□□□ -0.66
RBM39-208ENST00000416108 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
RBM39-208ENST00000416108 IFT57Q9NWB7 429 aa10.91□□□□□ -0.66
RBM39-208ENST00000416108 CYP27B1O15528 508 aa10.9□□□□□ -0.66
RBM39-208ENST00000416108 IL17REQ8NFR9 667 aa10.9□□□□□ -0.66
RBM39-208ENST00000416108 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
RBM39-208ENST00000416108 KDM6AO15550 1401 aaPredicted RBP10.9□□□□□ -0.66
RBM39-208ENST00000416108 MRC1P22897 1456 aa10.89□□□□□ -0.67
RBM39-208ENST00000416108 CABP4P57796 275 aa10.89□□□□□ -0.67
RBM39-208ENST00000416108 TAF7Q15545 349 aaPredicted RBP10.89□□□□□ -0.67
RBM39-208ENST00000416108 TSPYL4Q9UJ04 414 aa10.89□□□□□ -0.67
RBM39-208ENST00000416108 CEMIPQ8WUJ3 1361 aa10.89□□□□□ -0.67
RBM39-208ENST00000416108 SBF2Q86WG5 1849 aa10.88□□□□□ -0.67
RBM39-208ENST00000416108 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
RBM39-208ENST00000416108 RBM6P78332 1123 aaKnown RBP10.88□□□□□ -0.67
RBM39-208ENST00000416108 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
RBM39-208ENST00000416108 TSR2Q969E8 191 aaKnown RBP10.88□□□□□ -0.67
RBM39-208ENST00000416108 LGR6Q9HBX8 967 aa10.88□□□□□ -0.67
RBM39-208ENST00000416108 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
RBM39-208ENST00000416108 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms