RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 SLC4A1APQ9BWU0 796 aaKnown RBP9.29□□□□□ -0.92
LMBR1-204ENST00000415428 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
LMBR1-204ENST00000415428 XPCQ01831 940 aaPredicted RBP9.28□□□□□ -0.92
LMBR1-204ENST00000415428 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
LMBR1-204ENST00000415428 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.93
LMBR1-204ENST00000415428 PPP1R1BQ9UD71 204 aaPredicted RBP9.27□□□□□ -0.93
LMBR1-204ENST00000415428 TMEM132EQ6IEE7 984 aa9.26□□□□□ -0.93
LMBR1-204ENST00000415428 CDK19Q9BWU1 502 aa9.26□□□□□ -0.93
LMBR1-204ENST00000415428 MEGF6O75095 1541 aa9.26□□□□□ -0.93
LMBR1-204ENST00000415428 COL11A2P13942 1736 aaPredicted RBP9.26□□□□□ -0.93
LMBR1-204ENST00000415428 PRDM10Q9NQV6 1147 aa9.26□□□□□ -0.93
LMBR1-204ENST00000415428 TTC21BQ7Z4L5 1316 aa9.25□□□□□ -0.93
LMBR1-204ENST00000415428 TGFB2P61812 414 aa9.25□□□□□ -0.93
LMBR1-204ENST00000415428 TOMM70O94826 608 aa9.24□□□□□ -0.93
LMBR1-204ENST00000415428 TRPM7Q96QT4 1865 aa9.24□□□□□ -0.93
LMBR1-204ENST00000415428 RGL2O15211 777 aa9.24□□□□□ -0.93
LMBR1-204ENST00000415428 AXIN2Q9Y2T1 843 aa9.24□□□□□ -0.93
LMBR1-204ENST00000415428 PDGFDQ9GZP0 370 aaPredicted RBP9.23□□□□□ -0.93
LMBR1-204ENST00000415428 A0A1W2PP64 1363 aa9.23□□□□□ -0.93
LMBR1-204ENST00000415428 SSFA2P28290 1259 aa9.22□□□□□ -0.93
LMBR1-204ENST00000415428 POLD1P28340 1107 aa9.22□□□□□ -0.93
LMBR1-204ENST00000415428 RIC1Q4ADV7 1423 aa9.21□□□□□ -0.93
LMBR1-204ENST00000415428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.21□□□□□ -0.934e-7■□□□□ 11.1
LMBR1-204ENST00000415428 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.93
LMBR1-204ENST00000415428 SNED1Q8TER0 1413 aa9.21□□□□□ -0.93
LMBR1-204ENST00000415428 DDX60Q8IY21 1712 aaKnown RBP9.21□□□□□ -0.94
LMBR1-204ENST00000415428 PTF1AQ7RTS3 328 aa9.21□□□□□ -0.94
LMBR1-204ENST00000415428 LTBP3Q9NS15 1303 aa9.21□□□□□ -0.94
LMBR1-204ENST00000415428 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
LMBR1-204ENST00000415428 IL2RBP14784 551 aa9.2□□□□□ -0.94
LMBR1-204ENST00000415428 ADRA2BP18089 450 aa9.2□□□□□ -0.94
LMBR1-204ENST00000415428 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
LMBR1-204ENST00000415428 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
LMBR1-204ENST00000415428 CENPJQ9HC77 1338 aaPredicted RBP9.19□□□□□ -0.94
LMBR1-204ENST00000415428 EXOC5O00471 708 aa9.19□□□□□ -0.94
LMBR1-204ENST00000415428 IP6K1Q92551 441 aa9.19□□□□□ -0.94
LMBR1-204ENST00000415428 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
LMBR1-204ENST00000415428 NGDNQ8NEJ9 315 aaKnown RBP9.19□□□□□ -0.94
LMBR1-204ENST00000415428 MYH14Q7Z406 1995 aaKnown RBP9.18□□□□□ -0.94
LMBR1-204ENST00000415428 CNTNAP4Q9C0A0 1308 aa9.18□□□□□ -0.94
LMBR1-204ENST00000415428 CCDC88AQ3V6T2 1871 aa9.18□□□□□ -0.94
LMBR1-204ENST00000415428 HAP1P54257 671 aaPredicted RBP9.18□□□□□ -0.94
LMBR1-204ENST00000415428 POGKQ9P215 609 aa9.18□□□□□ -0.94
LMBR1-204ENST00000415428 KDM3BQ7LBC6 1761 aa9.17□□□□□ -0.94
LMBR1-204ENST00000415428 CCDC9Q9Y3X0 531 aaKnown RBP9.17□□□□□ -0.94
LMBR1-204ENST00000415428 ZNF609O15014 1411 aa9.17□□□□□ -0.94
LMBR1-204ENST00000415428 ZNF646O15015 1829 aaPredicted RBP9.17□□□□□ -0.94
LMBR1-204ENST00000415428 KCPQ6ZWJ8 1503 aa9.17□□□□□ -0.94
LMBR1-204ENST00000415428 RAB3GAP2Q9H2M9 1393 aa9.17□□□□□ -0.94
LMBR1-204ENST00000415428 EVA1CP58658 441 aa9.17□□□□□ -0.94
LMBR1-204ENST00000415428 NLGN2Q8NFZ4 835 aa9.17□□□□□ -0.94
LMBR1-204ENST00000415428 ZBTB7AO95365 584 aa9.16□□□□□ -0.94
LMBR1-204ENST00000415428 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
LMBR1-204ENST00000415428 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
LMBR1-204ENST00000415428 ABTB2Q8N961 1025 aa9.16□□□□□ -0.94
LMBR1-204ENST00000415428 STK26Q9P289 416 aa9.16□□□□□ -0.94
LMBR1-204ENST00000415428 PSME4Q14997 1843 aa9.16□□□□□ -0.94
LMBR1-204ENST00000415428 EVC2Q86UK5 1308 aa9.15□□□□□ -0.94
LMBR1-204ENST00000415428 FAM182BQ5T319 152 aa9.15□□□□□ -0.94
LMBR1-204ENST00000415428 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
LMBR1-204ENST00000415428 PASKQ96RG2 1323 aa9.14□□□□□ -0.95
LMBR1-204ENST00000415428 RGL3Q3MIN7 710 aa9.14□□□□□ -0.95
LMBR1-204ENST00000415428 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
LMBR1-204ENST00000415428 KCNA3P22001 575 aa9.14□□□□□ -0.95
LMBR1-204ENST00000415428 SMARCC1Q92922 1105 aaPredicted RBP9.13□□□□□ -0.95
LMBR1-204ENST00000415428 ANKRD36CQ5JPF3 1778 aa9.13□□□□□ -0.95
LMBR1-204ENST00000415428 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
LMBR1-204ENST00000415428 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
LMBR1-204ENST00000415428 LAMB2P55268 1798 aa9.12□□□□□ -0.95
LMBR1-204ENST00000415428 SSC5DA1L4H1 1573 aa9.12□□□□□ -0.95
LMBR1-204ENST00000415428 KTN1Q86UP2 1357 aaKnown RBP9.11□□□□□ -0.95
LMBR1-204ENST00000415428 GPBP1L1Q9HC44 474 aaPredicted RBP9.11□□□□□ -0.95
LMBR1-204ENST00000415428 ATF5Q9Y2D1 282 aaPredicted RBP9.11□□□□□ -0.95
LMBR1-204ENST00000415428 IGSF1Q8N6C5 1336 aa9.11□□□□□ -0.95
LMBR1-204ENST00000415428 STRN4Q9NRL3 753 aa9.1□□□□□ -0.95
LMBR1-204ENST00000415428 PCDH11XQ9BZA7 1347 aa9.1□□□□□ -0.95
LMBR1-204ENST00000415428 PCDH11YQ9BZA8 1340 aa9.1□□□□□ -0.95
LMBR1-204ENST00000415428 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
LMBR1-204ENST00000415428 TOM1L2Q6ZVM7 507 aa9.1□□□□□ -0.95
LMBR1-204ENST00000415428 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
LMBR1-204ENST00000415428 SMC1BQ8NDV3 1235 aa9.09□□□□□ -0.95
LMBR1-204ENST00000415428 PALLDQ8WX93 1383 aa9.09□□□□□ -0.95
LMBR1-204ENST00000415428 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
LMBR1-204ENST00000415428 GPR162Q16538 588 aa9.08□□□□□ -0.96
LMBR1-204ENST00000415428 L3MBTL3Q96JM7 780 aaPredicted RBP9.08□□□□□ -0.96
LMBR1-204ENST00000415428 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
LMBR1-204ENST00000415428 USP47Q96K76 1375 aa9.07□□□□□ -0.96
LMBR1-204ENST00000415428 HHIPL1Q96JK4 782 aa9.07□□□□□ -0.96
LMBR1-204ENST00000415428 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
LMBR1-204ENST00000415428 PAPPA2Q9BXP8 1791 aa9.06□□□□□ -0.96
LMBR1-204ENST00000415428 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
LMBR1-204ENST00000415428 ANKRD24Q8TF21 1146 aa9.06□□□□□ -0.96
LMBR1-204ENST00000415428 FLT4P35916 1363 aa9.05□□□□□ -0.96
LMBR1-204ENST00000415428 COL13A1Q5TAT6 717 aaPredicted RBP9.05□□□□□ -0.96
LMBR1-204ENST00000415428 IBTKQ9P2D0 1353 aaPredicted RBP9.05□□□□□ -0.96
LMBR1-204ENST00000415428 HOXC9P31274 260 aa9.04□□□□□ -0.96
LMBR1-204ENST00000415428 NLRP6P59044 892 aa9.04□□□□□ -0.96
LMBR1-204ENST00000415428 TM4SF1P30408 202 aa9.04□□□□□ -0.96
LMBR1-204ENST00000415428 CABP1Q9NZU7 370 aa9.04□□□□□ -0.96
LMBR1-204ENST00000415428 RASSF10A6NK89 507 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms