RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 PNPLA7Q6ZV29 1317 aa30.26■■■□□ 2.44
RHBDD3-204ENST00000414672 PELP1Q8IZL8 1130 aaKnown RBP30.26■■■□□ 2.43
RHBDD3-204ENST00000414672 ANKRD36BQ8N2N9 1353 aa30.26■■■□□ 2.43
RHBDD3-204ENST00000414672 FAM208AQ9UK61 1670 aaKnown RBP30.24■■■□□ 2.43
RHBDD3-204ENST00000414672 MSH5O43196 834 aa30.22■■■□□ 2.43
RHBDD3-204ENST00000414672 CCNL1Q9UK58 526 aaPredicted RBP30.22■■■□□ 2.43
RHBDD3-204ENST00000414672 RRS1Q15050 365 aaKnown RBP30.21■■■□□ 2.43
RHBDD3-204ENST00000414672 NBPF6Q5VWK0 638 aa30.19■■■□□ 2.42
RHBDD3-204ENST00000414672 USHBP1Q8N6Y0 703 aa30.19■■■□□ 2.42
RHBDD3-204ENST00000414672 RAPGEF4Q8WZA2 1011 aa30.19■■■□□ 2.42
RHBDD3-204ENST00000414672 NBPF4Q96M43 638 aa30.19■■■□□ 2.42
RHBDD3-204ENST00000414672 GGNBP2Q9H3C7 697 aa30.19■■■□□ 2.42
RHBDD3-204ENST00000414672 MEGF6O75095 1541 aa30.18■■■□□ 2.42
RHBDD3-204ENST00000414672 NSD2O96028 1365 aa30.17■■■□□ 2.42
RHBDD3-204ENST00000414672 RTL1A6NKG5 1358 aa30.16■■■□□ 2.42
RHBDD3-204ENST00000414672 USP47Q96K76 1375 aa30.16■■■□□ 2.42
RHBDD3-204ENST00000414672 CHD4Q14839 1912 aa30.16■■■□□ 2.42
RHBDD3-204ENST00000414672 DOT1LQ8TEK3 1739 aa30.16■■■□□ 2.42
RHBDD3-204ENST00000414672 FYB1O15117 783 aa30.15■■■□□ 2.42
RHBDD3-204ENST00000414672 SMG6Q86US8 1419 aaKnown RBP30.14■■■□□ 2.42
RHBDD3-204ENST00000414672 TATP17735 454 aaPredicted RBP30.14■■■□□ 2.42
RHBDD3-204ENST00000414672 TMF1P82094 1093 aa30.14■■■□□ 2.42
RHBDD3-204ENST00000414672 CGNL1Q0VF96 1302 aa30.14■■■□□ 2.42
RHBDD3-204ENST00000414672 SENP3-EIF4A1A0A087X0R7 540 aa30.13■■■□□ 2.41
RHBDD3-204ENST00000414672 NLGN2Q8NFZ4 835 aa30.13■■■□□ 2.41
RHBDD3-204ENST00000414672 C1QTNF8P60827 252 aa30.12■■■□□ 2.41
RHBDD3-204ENST00000414672 QSER1Q2KHR3 1735 aa30.12■■■□□ 2.41
RHBDD3-204ENST00000414672 RGPD2P0DJD1 1756 aa30.12■■■□□ 2.41
RHBDD3-204ENST00000414672 COL23A1Q86Y22 540 aaPredicted RBP30.1■■■□□ 2.41
RHBDD3-204ENST00000414672 HSP90AB2PQ58FF8 381 aa30.09■■■□□ 2.41
RHBDD3-204ENST00000414672 MSL1Q68DK7 614 aa30.08■■■□□ 2.41
RHBDD3-204ENST00000414672 LY75O60449 1722 aa30.08■■■□□ 2.41
RHBDD3-204ENST00000414672 TUBGCP6Q96RT7 1819 aa30.06■■■□□ 2.4
RHBDD3-204ENST00000414672 PCDH11XQ9BZA7 1347 aa30.06■■■□□ 2.4
RHBDD3-204ENST00000414672 PCDH11YQ9BZA8 1340 aa30.06■■■□□ 2.4
RHBDD3-204ENST00000414672 SHANK3Q9BYB0 1731 aa30.06■■■□□ 2.4
RHBDD3-204ENST00000414672 MPRIPQ6WCQ1 1025 aa30.05■■■□□ 2.4
RHBDD3-204ENST00000414672 INSRP06213 1382 aa30.04■■■□□ 2.4
RHBDD3-204ENST00000414672 GIGYF1O75420 1035 aaPredicted RBP30.04■■■□□ 2.4
RHBDD3-204ENST00000414672 GRIN3BO60391 1043 aa30.03■■■□□ 2.4
RHBDD3-204ENST00000414672 HMGB2P26583 209 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-204ENST00000414672 CDCA8Q53HL2 280 aa30.03■■■□□ 2.4
RHBDD3-204ENST00000414672 COL24A1Q17RW2 1714 aa30.02■■■□□ 2.4
RHBDD3-204ENST00000414672 FLT4P35916 1363 aa30.02■■■□□ 2.4
RHBDD3-204ENST00000414672 YBX3P16989 372 aaKnown RBP eCLIP30■■■□□ 2.39
RHBDD3-204ENST00000414672 FLAD1Q8NFF5 587 aa30■■■□□ 2.39
RHBDD3-204ENST00000414672 PALLDQ8WX93 1383 aa30■■■□□ 2.39
RHBDD3-204ENST00000414672 PPM1GO15355 546 aaPredicted RBP29.98■■■□□ 2.39
RHBDD3-204ENST00000414672 CYP27B1O15528 508 aa29.97■■■□□ 2.39
RHBDD3-204ENST00000414672 GOLGB1Q14789 3259 aaKnown RBP29.97■■■□□ 2.39
RHBDD3-204ENST00000414672 KIF24Q5T7B8 1368 aa29.96■■■□□ 2.39
RHBDD3-204ENST00000414672 SMARCC1Q92922 1105 aaPredicted RBP29.96■■■□□ 2.39
RHBDD3-204ENST00000414672 EMILIN1Q9Y6C2 1016 aa29.96■■■□□ 2.39
RHBDD3-204ENST00000414672 AK7Q96M32 723 aa29.95■■■□□ 2.39
RHBDD3-204ENST00000414672 CARD14Q9BXL6 1004 aa29.93■■■□□ 2.38
RHBDD3-204ENST00000414672 CD2APQ9Y5K6 639 aa29.93■■■□□ 2.38
RHBDD3-204ENST00000414672 C5P01031 1676 aa29.91■■■□□ 2.38
RHBDD3-204ENST00000414672 PHF14O94880 888 aa29.91■■■□□ 2.38
RHBDD3-204ENST00000414672 SPG7Q9UQ90 795 aa29.91■■■□□ 2.38
RHBDD3-204ENST00000414672 KIF20BQ96Q89 1820 aa29.9■■■□□ 2.38
RHBDD3-204ENST00000414672 PIGBQ92521 554 aa29.9■■■□□ 2.38
RHBDD3-204ENST00000414672 NSD3Q9BZ95 1437 aa29.89■■■□□ 2.38
RHBDD3-204ENST00000414672 SMIM5Q71RC9 77 aa29.86■■■□□ 2.37
RHBDD3-204ENST00000414672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.85■■■□□ 2.37
RHBDD3-204ENST00000414672 NKX1-1Q15270 411 aaPredicted RBP29.84■■■□□ 2.37
RHBDD3-204ENST00000414672 AMIGO3Q86WK7 504 aa29.84■■■□□ 2.37
RHBDD3-204ENST00000414672 TMOD3Q9NYL9 352 aa29.84■■■□□ 2.37
RHBDD3-204ENST00000414672 C4BP0C0L5 1744 aa29.82■■■□□ 2.36
RHBDD3-204ENST00000414672 WASHC2AQ641Q2 1341 aa29.82■■■□□ 2.36
RHBDD3-204ENST00000414672 LOC102724428A0A0B4J2F2 783 aa29.82■■■□□ 2.36
RHBDD3-204ENST00000414672 SIK1P57059 783 aa29.82■■■□□ 2.36
RHBDD3-204ENST00000414672 EYA1Q99502 592 aa29.82■■■□□ 2.36
RHBDD3-204ENST00000414672 WWC3Q9ULE0 1092 aa29.82■■■□□ 2.36
RHBDD3-204ENST00000414672 ATP10DQ9P241 1426 aa29.81■■■□□ 2.36
RHBDD3-204ENST00000414672 TAF1LQ8IZX4 1826 aa29.81■■■□□ 2.36
RHBDD3-204ENST00000414672 TOGARAM1Q9Y4F4 1720 aa29.8■■■□□ 2.36
RHBDD3-204ENST00000414672 LINC00116Q8NCU8 138 aa29.8■■■□□ 2.36
RHBDD3-204ENST00000414672 POLR3GLQ9BT43 218 aa29.8■■■□□ 2.36
RHBDD3-204ENST00000414672 SSFA2P28290 1259 aa29.79■■■□□ 2.36
RHBDD3-204ENST00000414672 GPBP1L1Q9HC44 474 aaPredicted RBP29.79■■■□□ 2.36
RHBDD3-204ENST00000414672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.79■■■□□ 2.36
RHBDD3-204ENST00000414672 ITGB4P16144 1822 aa29.79■■■□□ 2.36
RHBDD3-204ENST00000414672 IFNL2Q8IZJ0 200 aa29.78■■■□□ 2.36
RHBDD3-204ENST00000414672 ASAP1Q9ULH1 1129 aa29.78■■■□□ 2.36
RHBDD3-204ENST00000414672 PKD1L3Q7Z443 1732 aa29.78■■■□□ 2.36
RHBDD3-204ENST00000414672 IGSF1Q8N6C5 1336 aa29.77■■■□□ 2.36
RHBDD3-204ENST00000414672 GNPATO15228 680 aa29.77■■■□□ 2.36
RHBDD3-204ENST00000414672 ATP6V1AP38606 617 aa29.77■■■□□ 2.36
RHBDD3-204ENST00000414672 ZNF526Q8TF50 670 aaPredicted RBP29.77■■■□□ 2.36
RHBDD3-204ENST00000414672 NCAPD2Q15021 1401 aa29.77■■■□□ 2.36
RHBDD3-204ENST00000414672 TNNT2P45379 298 aaPredicted RBP29.76■■■□□ 2.35
RHBDD3-204ENST00000414672 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
RHBDD3-204ENST00000414672 POLKQ9UBT6 870 aa29.76■■■□□ 2.35
RHBDD3-204ENST00000414672 PHKG2P15735 406 aa29.75■■■□□ 2.35
RHBDD3-204ENST00000414672 ITPK1Q13572 414 aa29.74■■■□□ 2.35
RHBDD3-204ENST00000414672 ATG3Q9NT62 314 aa29.71■■■□□ 2.35
RHBDD3-204ENST00000414672 UBR3Q6ZT12 1888 aa29.7■■■□□ 2.35
RHBDD3-204ENST00000414672 EIF4A2Q14240 407 aaKnown RBP29.7■■■□□ 2.35
RHBDD3-204ENST00000414672 MMP10P09238 476 aa29.67■■■□□ 2.34
RHBDD3-204ENST00000414672 RBM42Q9BTD8 480 aaKnown RBP29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms