RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 PHACTR3Q96KR7 559 aa20.32■□□□□ 0.84
LINC00116-201ENST00000414416 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
LINC00116-201ENST00000414416 BARGINQ6ZT62 677 aa20.3■□□□□ 0.84
LINC00116-201ENST00000414416 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
LINC00116-201ENST00000414416 PLEKHG2Q9H7P9 1386 aa20.3■□□□□ 0.84
LINC00116-201ENST00000414416 OVOS2A0A0G2JMS6 1433 aa20.29■□□□□ 0.84
LINC00116-201ENST00000414416 DISP2A7MBM2 1401 aa20.29■□□□□ 0.84
LINC00116-201ENST00000414416 APAF1O14727 1248 aa20.29■□□□□ 0.84
LINC00116-201ENST00000414416 CDCA7Q9BWT1 371 aaPredicted RBP20.29■□□□□ 0.84
LINC00116-201ENST00000414416 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
LINC00116-201ENST00000414416 FAM98CQ17RN3 349 aaKnown RBP20.28■□□□□ 0.84
LINC00116-201ENST00000414416 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
LINC00116-201ENST00000414416 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
LINC00116-201ENST00000414416 GLI3P10071 1580 aa20.28■□□□□ 0.84
LINC00116-201ENST00000414416 MTHFSDQ2M296 383 aaKnown RBP20.27■□□□□ 0.84
LINC00116-201ENST00000414416 SPG7Q9UQ90 795 aa20.27■□□□□ 0.84
LINC00116-201ENST00000414416 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
LINC00116-201ENST00000414416 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
LINC00116-201ENST00000414416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.26■□□□□ 0.83
LINC00116-201ENST00000414416 RGS17Q9UGC6 210 aaPredicted RBP20.26■□□□□ 0.83
LINC00116-201ENST00000414416 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
LINC00116-201ENST00000414416 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
LINC00116-201ENST00000414416 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
LINC00116-201ENST00000414416 PKD1L3Q7Z443 1732 aa20.25■□□□□ 0.83
LINC00116-201ENST00000414416 NEUROD2Q15784 382 aa20.25■□□□□ 0.83
LINC00116-201ENST00000414416 RRP7AQ9Y3A4 280 aaKnown RBP20.25■□□□□ 0.83
LINC00116-201ENST00000414416 A0A0G2JS52 829 aa20.23■□□□□ 0.83
LINC00116-201ENST00000414416 EXOC5O00471 708 aa20.23■□□□□ 0.83
LINC00116-201ENST00000414416 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
LINC00116-201ENST00000414416 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
LINC00116-201ENST00000414416 RIPK4P57078 832 aa20.23■□□□□ 0.83
LINC00116-201ENST00000414416 DDB1Q16531 1140 aa20.22■□□□□ 0.83
LINC00116-201ENST00000414416 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
LINC00116-201ENST00000414416 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
LINC00116-201ENST00000414416 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
LINC00116-201ENST00000414416 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
LINC00116-201ENST00000414416 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
LINC00116-201ENST00000414416 TNS2Q63HR2 1409 aa20.21■□□□□ 0.83
LINC00116-201ENST00000414416 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
LINC00116-201ENST00000414416 LRRC37A3O60309 1634 aa20.21■□□□□ 0.83
LINC00116-201ENST00000414416 RXRBP28702 533 aa20.2■□□□□ 0.82
LINC00116-201ENST00000414416 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
LINC00116-201ENST00000414416 POTEAQ6S8J7 498 aa20.2■□□□□ 0.82
LINC00116-201ENST00000414416 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
LINC00116-201ENST00000414416 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
LINC00116-201ENST00000414416 MAP3K5Q99683 1374 aa20.19■□□□□ 0.82
LINC00116-201ENST00000414416 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
LINC00116-201ENST00000414416 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
LINC00116-201ENST00000414416 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
LINC00116-201ENST00000414416 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
LINC00116-201ENST00000414416 CYP27B1O15528 508 aa20.18■□□□□ 0.82
LINC00116-201ENST00000414416 PHKG2P15735 406 aa20.18■□□□□ 0.82
LINC00116-201ENST00000414416 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
LINC00116-201ENST00000414416 LMOD3Q0VAK6 560 aa20.18■□□□□ 0.82
LINC00116-201ENST00000414416 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
LINC00116-201ENST00000414416 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
LINC00116-201ENST00000414416 TRIM35Q9UPQ4 493 aa20.17■□□□□ 0.82
LINC00116-201ENST00000414416 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
LINC00116-201ENST00000414416 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
LINC00116-201ENST00000414416 CCDC27Q2M243 656 aa20.16■□□□□ 0.82
LINC00116-201ENST00000414416 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
LINC00116-201ENST00000414416 PDE3BQ13370 1112 aa20.15■□□□□ 0.82
LINC00116-201ENST00000414416 WWC1Q8IX03 1113 aa20.14■□□□□ 0.81
LINC00116-201ENST00000414416 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
LINC00116-201ENST00000414416 MCM10Q7L590 875 aa20.14■□□□□ 0.81
LINC00116-201ENST00000414416 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
LINC00116-201ENST00000414416 NKX1-1Q15270 411 aaPredicted RBP20.12■□□□□ 0.81
LINC00116-201ENST00000414416 MARCH10Q8NA82 808 aaPredicted RBP20.12■□□□□ 0.81
LINC00116-201ENST00000414416 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
LINC00116-201ENST00000414416 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
LINC00116-201ENST00000414416 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
LINC00116-201ENST00000414416 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
LINC00116-201ENST00000414416 RNMTO43148 476 aaKnown RBP20.11■□□□□ 0.81
LINC00116-201ENST00000414416 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
LINC00116-201ENST00000414416 RGS12O14924 1447 aa20.1■□□□□ 0.81
LINC00116-201ENST00000414416 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
LINC00116-201ENST00000414416 CEMIPQ8WUJ3 1361 aa20.1■□□□□ 0.81
LINC00116-201ENST00000414416 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
LINC00116-201ENST00000414416 CALD1Q05682 793 aaKnown RBP20.09■□□□□ 0.81
LINC00116-201ENST00000414416 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
LINC00116-201ENST00000414416 ADAMTS7Q9UKP4 1686 aa20.08■□□□□ 0.81
LINC00116-201ENST00000414416 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.81
LINC00116-201ENST00000414416 VIRMAQ69YN4 1812 aaKnown RBP20.08■□□□□ 0.81
LINC00116-201ENST00000414416 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.81
LINC00116-201ENST00000414416 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.81
LINC00116-201ENST00000414416 TEFQ10587 303 aa20.07■□□□□ 0.8
LINC00116-201ENST00000414416 GOLGA2Q08379 1002 aa20.06■□□□□ 0.8
LINC00116-201ENST00000414416 ERVV-2B6SEH9 535 aa20.05■□□□□ 0.8
LINC00116-201ENST00000414416 FAM182BQ5T319 152 aa20.05■□□□□ 0.8
LINC00116-201ENST00000414416 SLC52A2Q9HAB3 445 aa20.04■□□□□ 0.8
LINC00116-201ENST00000414416 IL16Q14005 1332 aa20.04■□□□□ 0.8
LINC00116-201ENST00000414416 TOGARAM1Q9Y4F4 1720 aa20.04■□□□□ 0.8
LINC00116-201ENST00000414416 CABP4P57796 275 aa20.04■□□□□ 0.8
LINC00116-201ENST00000414416 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
LINC00116-201ENST00000414416 MRC1P22897 1456 aa20.03■□□□□ 0.8
LINC00116-201ENST00000414416 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
LINC00116-201ENST00000414416 NFATC2IPQ8NCF5 419 aa20.03■□□□□ 0.8
LINC00116-201ENST00000414416 DOT1LQ8TEK3 1739 aa20.02■□□□□ 0.8
LINC00116-201ENST00000414416 BCL9O00512 1426 aa20.02■□□□□ 0.8
LINC00116-201ENST00000414416 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms