RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 ARHGAP23Q9P227 1491 aa9.96□□□□□ -0.82
LINC00343-201ENST00000414368 SLIT1O75093 1534 aa9.96□□□□□ -0.82
LINC00343-201ENST00000414368 POLR1AO95602 1720 aaPredicted RBP9.96□□□□□ -0.82
LINC00343-201ENST00000414368 PADI6Q6TGC4 694 aa9.95□□□□□ -0.82
LINC00343-201ENST00000414368 GPBP1L1Q9HC44 474 aaPredicted RBP9.95□□□□□ -0.82
LINC00343-201ENST00000414368 AAASQ9NRG9 546 aa9.95□□□□□ -0.82
LINC00343-201ENST00000414368 RIMS2Q9UQ26 1411 aa9.95□□□□□ -0.82
LINC00343-201ENST00000414368 NEURL4Q96JN8 1562 aa9.94□□□□□ -0.82
LINC00343-201ENST00000414368 ZFYVE9O95405 1425 aa9.94□□□□□ -0.82
LINC00343-201ENST00000414368 SPATA31E1Q6ZUB1 1445 aa9.94□□□□□ -0.82
LINC00343-201ENST00000414368 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
LINC00343-201ENST00000414368 TTLL12Q14166 644 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-201ENST00000414368 RBM27Q9P2N5 1060 aaKnown RBP9.94□□□□□ -0.82
LINC00343-201ENST00000414368 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
LINC00343-201ENST00000414368 SCAF11Q99590 1463 aaKnown RBP9.93□□□□□ -0.82
LINC00343-201ENST00000414368 PRSS12P56730 875 aa9.93□□□□□ -0.82
LINC00343-201ENST00000414368 AMHR2Q16671 573 aa9.93□□□□□ -0.82
LINC00343-201ENST00000414368 SAMD7Q7Z3H4 446 aa9.93□□□□□ -0.82
LINC00343-201ENST00000414368 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
LINC00343-201ENST00000414368 KDM4CQ9H3R0 1056 aa9.93□□□□□ -0.82
LINC00343-201ENST00000414368 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
LINC00343-201ENST00000414368 OATP04181 439 aa9.92□□□□□ -0.82
LINC00343-201ENST00000414368 NFX1Q12986 1120 aaKnown RBP9.92□□□□□ -0.82
LINC00343-201ENST00000414368 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
LINC00343-201ENST00000414368 CDCA7LQ96GN5 454 aa9.92□□□□□ -0.82
LINC00343-201ENST00000414368 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
LINC00343-201ENST00000414368 NEXMIFQ5QGS0 1516 aa9.92□□□□□ -0.82
LINC00343-201ENST00000414368 NPHP4O75161 1426 aaPredicted RBP9.91□□□□□ -0.82
LINC00343-201ENST00000414368 PPLO60437 1756 aa9.91□□□□□ -0.82
LINC00343-201ENST00000414368 IQGAP1P46940 1657 aa9.91□□□□□ -0.82
LINC00343-201ENST00000414368 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
LINC00343-201ENST00000414368 SUZ12Q15022 739 aaKnown RBP9.91□□□□□ -0.82
LINC00343-201ENST00000414368 SPRYD7Q5W111 196 aa9.91□□□□□ -0.82
LINC00343-201ENST00000414368 SLC26A8Q96RN1 970 aa9.91□□□□□ -0.82
LINC00343-201ENST00000414368 MED14O60244 1454 aa9.91□□□□□ -0.82
LINC00343-201ENST00000414368 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC00343-201ENST00000414368 IFT172Q9UG01 1749 aa9.9□□□□□ -0.83
LINC00343-201ENST00000414368 RPGRIP1LQ68CZ1 1315 aa9.89□□□□□ -0.83
LINC00343-201ENST00000414368 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
LINC00343-201ENST00000414368 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
LINC00343-201ENST00000414368 CCER1Q8TC90 406 aaPredicted RBP9.89□□□□□ -0.83
LINC00343-201ENST00000414368 PARP9Q8IXQ6 854 aa9.88□□□□□ -0.83
LINC00343-201ENST00000414368 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
LINC00343-201ENST00000414368 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
LINC00343-201ENST00000414368 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
LINC00343-201ENST00000414368 PLEKHG1Q9ULL1 1385 aa9.88□□□□□ -0.83
LINC00343-201ENST00000414368 CLCN1P35523 988 aa9.87□□□□□ -0.83
LINC00343-201ENST00000414368 METTL3Q86U44 580 aaKnown RBP9.87□□□□□ -0.83
LINC00343-201ENST00000414368 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
LINC00343-201ENST00000414368 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
LINC00343-201ENST00000414368 EMID1Q96A84 441 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-201ENST00000414368 ZNF335Q9H4Z2 1342 aaPredicted RBP9.86□□□□□ -0.83
LINC00343-201ENST00000414368 NRXN3Q9Y4C0 1643 aa9.86□□□□□ -0.83
LINC00343-201ENST00000414368 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
LINC00343-201ENST00000414368 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
LINC00343-201ENST00000414368 APLP1P51693 650 aa9.86□□□□□ -0.83
LINC00343-201ENST00000414368 MDM2Q00987 491 aaPredicted RBP9.86□□□□□ -0.83
LINC00343-201ENST00000414368 ADAMTS13Q76LX8 1427 aa9.86□□□□□ -0.83
LINC00343-201ENST00000414368 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
LINC00343-201ENST00000414368 FAM181BA6NEQ2 426 aa9.85□□□□□ -0.83
LINC00343-201ENST00000414368 NBPF26B4DH59 902 aa9.85□□□□□ -0.83
LINC00343-201ENST00000414368 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
LINC00343-201ENST00000414368 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
LINC00343-201ENST00000414368 STRCP1A6NGW2 1772 aa9.85□□□□□ -0.83
LINC00343-201ENST00000414368 SETBP1Q9Y6X0 1596 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 RNF223E7ERA6 249 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 COPS2P61201 443 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 ZNF697Q5TEC3 545 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 PXYLP1Q8TE99 480 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 TBX22Q9Y458 520 aa9.84□□□□□ -0.83
LINC00343-201ENST00000414368 ALKQ9UM73 1620 aa9.83□□□□□ -0.84
LINC00343-201ENST00000414368 GDF9O60383 454 aa9.83□□□□□ -0.84
LINC00343-201ENST00000414368 CFAP70Q5T0N1 1121 aa9.83□□□□□ -0.84
LINC00343-201ENST00000414368 TMEM132EQ6IEE7 984 aa9.83□□□□□ -0.84
LINC00343-201ENST00000414368 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
LINC00343-201ENST00000414368 CHD2O14647 1828 aaKnown RBP9.83□□□□□ -0.84
LINC00343-201ENST00000414368 METP08581 1390 aa9.83□□□□□ -0.84
LINC00343-201ENST00000414368 SETD1AO15047 1707 aaKnown RBP9.82□□□□□ -0.84
LINC00343-201ENST00000414368 SMAPO00193 183 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 PHOX2BQ99453 314 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
LINC00343-201ENST00000414368 FAM198AQ9UFP1 575 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 DACH1Q9UI36 760 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 PNMA3Q9UL41 463 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 MYOM2P54296 1465 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 NRXN1Q9ULB1 1477 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 PTPRUQ92729 1446 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 CLSPNQ9HAW4 1339 aa9.82□□□□□ -0.84
LINC00343-201ENST00000414368 TONSLQ96HA7 1378 aa9.81□□□□□ -0.84
LINC00343-201ENST00000414368 RNF40O75150 1001 aa9.81□□□□□ -0.84
LINC00343-201ENST00000414368 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
LINC00343-201ENST00000414368 NLRP7Q8WX94 980 aa9.81□□□□□ -0.84
LINC00343-201ENST00000414368 FAM117AQ9C073 453 aa9.81□□□□□ -0.84
LINC00343-201ENST00000414368 C14orf93Q9H972 538 aaKnown RBP9.81□□□□□ -0.84
LINC00343-201ENST00000414368 LTBP4Q8N2S1 1624 aa9.81□□□□□ -0.84
LINC00343-201ENST00000414368 DIP2AQ14689 1571 aa9.8□□□□□ -0.84
LINC00343-201ENST00000414368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.8□□□□□ -0.84
LINC00343-201ENST00000414368 KCNA6P17658 529 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms