RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 PPP4R3AQ6IN85 833 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 SNAPC4Q5SXM2 1469 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 GBP3Q9H0R5 595 aa12.51□□□□□ -0.41
SCN5A-204ENST00000414099 CEP131Q9UPN4 1083 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 CFTRP13569 1480 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 PPP1R12BO60237 982 aaPredicted RBP12.5□□□□□ -0.41
SCN5A-204ENST00000414099 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 ZNF397Q8NF99 534 aaPredicted RBP12.5□□□□□ -0.41
SCN5A-204ENST00000414099 UBAC1Q9BSL1 405 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 TOPBP1Q92547 1522 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 SMTNL1A8MU46 457 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 ZNF76P36508 570 aa12.5□□□□□ -0.41
SCN5A-204ENST00000414099 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 RUSC2Q8N2Y8 1516 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 WDR33Q9C0J8 1336 aaKnown RBP12.49□□□□□ -0.41
SCN5A-204ENST00000414099 PLCD4Q9BRC7 762 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 EHMT1Q9H9B1 1298 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 CEP126Q9P2H0 1117 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 TDO2P48775 406 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 CAVIN4Q5BKX8 364 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
SCN5A-204ENST00000414099 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
SCN5A-204ENST00000414099 SEC63Q9UGP8 760 aaKnown RBP12.48□□□□□ -0.41
SCN5A-204ENST00000414099 CFAP65Q6ZU64 1925 aaKnown RBP12.48□□□□□ -0.41
SCN5A-204ENST00000414099 CFAP45Q9UL16 551 aa12.48□□□□□ -0.41
SCN5A-204ENST00000414099 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN5A-204ENST00000414099 GOLGA6L10A0A0M3HER8 536 aa12.48□□□□□ -0.41
SCN5A-204ENST00000414099 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
SCN5A-204ENST00000414099 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
SCN5A-204ENST00000414099 MAP9Q49MG5 647 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 LRP2BPQ9P2M1 347 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 TAF4BQ92750 862 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 NF2P35240 595 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 TANGO6Q9C0B7 1094 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 TRAK2O60296 914 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
SCN5A-204ENST00000414099 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
SCN5A-204ENST00000414099 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
SCN5A-204ENST00000414099 SKIDA1Q1XH10 827 aa12.46□□□□□ -0.41
SCN5A-204ENST00000414099 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.41
SCN5A-204ENST00000414099 KRT85P78386 507 aa12.46□□□□□ -0.41
SCN5A-204ENST00000414099 TMOD3Q9NYL9 352 aa12.46□□□□□ -0.41
SCN5A-204ENST00000414099 MYL6BP14649 208 aa12.46□□□□□ -0.42
SCN5A-204ENST00000414099 ZNF644Q9H582 1327 aaPredicted RBP12.46□□□□□ -0.42
SCN5A-204ENST00000414099 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.42
SCN5A-204ENST00000414099 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 CCDC150Q8NCX0 1101 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 CCDC196A0A1B0GTZ2 297 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 FAM107BQ9H098 131 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 IMMTQ16891 758 aaKnown RBP12.45□□□□□ -0.42
SCN5A-204ENST00000414099 PTPN23Q9H3S7 1636 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
SCN5A-204ENST00000414099 FKBP4Q02790 459 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCN5A-204ENST00000414099 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
SCN5A-204ENST00000414099 RAB34Q9BZG1 259 aa12.44□□□□□ -0.42
SCN5A-204ENST00000414099 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
SCN5A-204ENST00000414099 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
SCN5A-204ENST00000414099 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
SCN5A-204ENST00000414099 NEK4P51957 841 aa12.44□□□□□ -0.42
SCN5A-204ENST00000414099 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
SCN5A-204ENST00000414099 PPP2R1AP30153 589 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 RAI14Q9P0K7 980 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
SCN5A-204ENST00000414099 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
SCN5A-204ENST00000414099 FCHSD2O94868 740 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 MYZAPP0CAP1 466 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
SCN5A-204ENST00000414099 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 TAX1BP1Q86VP1 789 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 TMEM87AQ8NBN3 555 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 CABP1Q9NZU7 370 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 KIAA1328Q86T90 577 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 PPP6R1Q9UPN7 881 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 IFIT1P09914 478 aaKnown RBP12.43□□□□□ -0.42
SCN5A-204ENST00000414099 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 GIGYF2Q6Y7W6 1299 aaKnown RBP12.43□□□□□ -0.42
SCN5A-204ENST00000414099 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
SCN5A-204ENST00000414099 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
SCN5A-204ENST00000414099 MICALCLQ6ZW33 695 aa12.42□□□□□ -0.42
SCN5A-204ENST00000414099 CRACR2BQ8N4Y2 399 aaPredicted RBP12.42□□□□□ -0.42
SCN5A-204ENST00000414099 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
SCN5A-204ENST00000414099 MAGI1Q96QZ7 1491 aaPredicted RBP12.42□□□□□ -0.42
SCN5A-204ENST00000414099 CUL5Q93034 780 aa12.42□□□□□ -0.42
SCN5A-204ENST00000414099 AIDAQ96BJ3 306 aa12.42□□□□□ -0.42
SCN5A-204ENST00000414099 CCDC97Q96F63 343 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms