RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 DDX10Q13206 875 aaKnown RBP23.11■■□□□ 1.29
SCAMP4-204ENST00000414057 HSP90AB2PQ58FF8 381 aa23.1■■□□□ 1.29
SCAMP4-204ENST00000414057 ANO8Q9HCE9 1232 aaPredicted RBP23.09■■□□□ 1.29
SCAMP4-204ENST00000414057 TATP17735 454 aaPredicted RBP23.08■■□□□ 1.29
SCAMP4-204ENST00000414057 SLC15A2Q16348 729 aa23.07■■□□□ 1.28
SCAMP4-204ENST00000414057 PPP1R1BQ9UD71 204 aaPredicted RBP23.07■■□□□ 1.28
SCAMP4-204ENST00000414057 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
SCAMP4-204ENST00000414057 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
SCAMP4-204ENST00000414057 EMILIN1Q9Y6C2 1016 aa23.05■■□□□ 1.28
SCAMP4-204ENST00000414057 MEGF6O75095 1541 aa23.05■■□□□ 1.28
SCAMP4-204ENST00000414057 USHBP1Q8N6Y0 703 aa23.05■■□□□ 1.28
SCAMP4-204ENST00000414057 SLC27A3Q5K4L6 730 aa23.03■■□□□ 1.28
SCAMP4-204ENST00000414057 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
SCAMP4-204ENST00000414057 PANK3Q9H999 370 aa23.01■■□□□ 1.27
SCAMP4-204ENST00000414057 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
SCAMP4-204ENST00000414057 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
SCAMP4-204ENST00000414057 RGPD2P0DJD1 1756 aa23■■□□□ 1.27
SCAMP4-204ENST00000414057 BTAF1O14981 1849 aa22.99■■□□□ 1.27
SCAMP4-204ENST00000414057 POLKQ9UBT6 870 aa22.98■■□□□ 1.27
SCAMP4-204ENST00000414057 NSD2O96028 1365 aa22.98■■□□□ 1.27
SCAMP4-204ENST00000414057 ZBTB7AO95365 584 aa22.97■■□□□ 1.27
SCAMP4-204ENST00000414057 HMGB2P26583 209 aaKnown RBP22.97■■□□□ 1.27
SCAMP4-204ENST00000414057 MTFR1LQ9H019 292 aa22.96■■□□□ 1.27
SCAMP4-204ENST00000414057 KAT6BQ8WYB5 2073 aa22.96■■□□□ 1.27
SCAMP4-204ENST00000414057 DCAF8L1A6NGE4 600 aa22.95■■□□□ 1.26
SCAMP4-204ENST00000414057 TNNT2P45379 298 aaPredicted RBP22.95■■□□□ 1.26
SCAMP4-204ENST00000414057 PDGFDQ9GZP0 370 aaPredicted RBP22.95■■□□□ 1.26
SCAMP4-204ENST00000414057 LRRC4BQ9NT99 713 aa22.95■■□□□ 1.26
SCAMP4-204ENST00000414057 SPG7Q9UQ90 795 aa22.95■■□□□ 1.26
SCAMP4-204ENST00000414057 CASZ1Q86V15 1759 aa22.95■■□□□ 1.26
SCAMP4-204ENST00000414057 MIER1Q8N108 512 aa22.94■■□□□ 1.26
SCAMP4-204ENST00000414057 KNSTRNQ9Y448 316 aa22.94■■□□□ 1.26
SCAMP4-204ENST00000414057 EYA1Q99502 592 aa22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 ANKRD26Q9UPS8 1709 aa22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 ATF5Q9Y2D1 282 aaPredicted RBP22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 DOT1LQ8TEK3 1739 aa22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 NCAPD2Q15021 1401 aa22.92■■□□□ 1.26
SCAMP4-204ENST00000414057 PAPPAQ13219 1627 aa22.91■■□□□ 1.26
SCAMP4-204ENST00000414057 ANP32CO43423 234 aa22.91■■□□□ 1.26
SCAMP4-204ENST00000414057 ZNF827Q17R98 1081 aa22.91■■□□□ 1.26
SCAMP4-204ENST00000414057 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
SCAMP4-204ENST00000414057 CCNL1Q9UK58 526 aaPredicted RBP22.91■■□□□ 1.26
SCAMP4-204ENST00000414057 CYP27B1O15528 508 aa22.9■■□□□ 1.26
SCAMP4-204ENST00000414057 AKT1S1Q96B36 256 aa22.9■■□□□ 1.26
SCAMP4-204ENST00000414057 PTGER2P43116 358 aa22.89■■□□□ 1.25
SCAMP4-204ENST00000414057 EIF4A2Q14240 407 aaKnown RBP22.89■■□□□ 1.25
SCAMP4-204ENST00000414057 SLC16A10Q8TF71 515 aa22.89■■□□□ 1.25
SCAMP4-204ENST00000414057 MAP2P11137 1827 aaKnown RBP22.89■■□□□ 1.25
SCAMP4-204ENST00000414057 TFCP2L1Q9NZI6 479 aa22.88■■□□□ 1.25
SCAMP4-204ENST00000414057 PLEKHG2Q9H7P9 1386 aa22.88■■□□□ 1.25
SCAMP4-204ENST00000414057 MPRIPQ6WCQ1 1025 aa22.87■■□□□ 1.25
SCAMP4-204ENST00000414057 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-204ENST00000414057 SMARCC1Q92922 1105 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-204ENST00000414057 IFNL2Q8IZJ0 200 aa22.85■■□□□ 1.25
SCAMP4-204ENST00000414057 KCNQ4P56696 695 aa22.84■■□□□ 1.25
SCAMP4-204ENST00000414057 PKD1L3Q7Z443 1732 aa22.83■■□□□ 1.25
SCAMP4-204ENST00000414057 IGSF1Q8N6C5 1336 aa22.83■■□□□ 1.25
SCAMP4-204ENST00000414057 LY75O60449 1722 aa22.83■■□□□ 1.24
SCAMP4-204ENST00000414057 PALLDQ8WX93 1383 aa22.83■■□□□ 1.24
SCAMP4-204ENST00000414057 SGIP1Q9BQI5 828 aa22.82■■□□□ 1.24
SCAMP4-204ENST00000414057 PNPLA7Q6ZV29 1317 aa22.82■■□□□ 1.24
SCAMP4-204ENST00000414057 POLD1P28340 1107 aa22.81■■□□□ 1.24
SCAMP4-204ENST00000414057 ARXQ96QS3 562 aa22.81■■□□□ 1.24
SCAMP4-204ENST00000414057 PHKG2P15735 406 aa22.8■■□□□ 1.24
SCAMP4-204ENST00000414057 TMOD3Q9NYL9 352 aa22.8■■□□□ 1.24
SCAMP4-204ENST00000414057 HSP90AB1P08238 724 aaKnown RBP22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 PLEKHO1Q53GL0 409 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 FHDC1Q9C0D6 1143 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 FLAD1Q8NFF5 587 aa22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 PIGBQ92521 554 aa22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 SYT17Q9BSW7 474 aa22.79■■□□□ 1.24
SCAMP4-204ENST00000414057 QSER1Q2KHR3 1735 aa22.78■■□□□ 1.24
SCAMP4-204ENST00000414057 AMOTQ4VCS5 1084 aa22.78■■□□□ 1.24
SCAMP4-204ENST00000414057 MSH5O43196 834 aa22.76■■□□□ 1.23
SCAMP4-204ENST00000414057 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
SCAMP4-204ENST00000414057 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
SCAMP4-204ENST00000414057 DCAF5Q96JK2 942 aa22.73■■□□□ 1.23
SCAMP4-204ENST00000414057 TOGARAM1Q9Y4F4 1720 aa22.73■■□□□ 1.23
SCAMP4-204ENST00000414057 ERVV-2B6SEH9 535 aa22.73■■□□□ 1.23
SCAMP4-204ENST00000414057 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
SCAMP4-204ENST00000414057 COL23A1Q86Y22 540 aaPredicted RBP22.73■■□□□ 1.23
SCAMP4-204ENST00000414057 AK7Q96M32 723 aa22.73■■□□□ 1.23
SCAMP4-204ENST00000414057 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
SCAMP4-204ENST00000414057 YY1P25490 414 aa22.72■■□□□ 1.23
SCAMP4-204ENST00000414057 SIK1P57059 783 aa22.72■■□□□ 1.23
SCAMP4-204ENST00000414057 IL13P35225 146 aa22.71■■□□□ 1.23
SCAMP4-204ENST00000414057 C1orf141Q5JVX7 400 aa22.71■■□□□ 1.23
SCAMP4-204ENST00000414057 SULT6B1Q6IMI4 303 aa22.71■■□□□ 1.23
SCAMP4-204ENST00000414057 ZNF530Q6P9A1 599 aaPredicted RBP22.71■■□□□ 1.23
SCAMP4-204ENST00000414057 ITGB4P16144 1822 aa22.71■■□□□ 1.23
SCAMP4-204ENST00000414057 MTHFSP49914 203 aa22.7■■□□□ 1.22
SCAMP4-204ENST00000414057 C5P01031 1676 aa22.69■■□□□ 1.22
SCAMP4-204ENST00000414057 CC2D1BQ5T0F9 858 aaKnown RBP22.69■■□□□ 1.22
SCAMP4-204ENST00000414057 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
SCAMP4-204ENST00000414057 KLHL34Q8N239 644 aa22.68■■□□□ 1.22
SCAMP4-204ENST00000414057 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms