RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
HLA-DMB-257ENST00000414017 WNK3Q9BYP7 1800 aa13.93□□□□□ -0.18
HLA-DMB-257ENST00000414017 ONECUT3O60422 494 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMB-257ENST00000414017 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
HLA-DMB-257ENST00000414017 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
HLA-DMB-257ENST00000414017 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
HLA-DMB-257ENST00000414017 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
HLA-DMB-257ENST00000414017 LRRC37A3O60309 1634 aa13.91□□□□□ -0.18
HLA-DMB-257ENST00000414017 BRWD3Q6RI45 1802 aa13.91□□□□□ -0.18
HLA-DMB-257ENST00000414017 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
HLA-DMB-257ENST00000414017 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
HLA-DMB-257ENST00000414017 SPG7Q9UQ90 795 aa13.9□□□□□ -0.18
HLA-DMB-257ENST00000414017 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
HLA-DMB-257ENST00000414017 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.19
HLA-DMB-257ENST00000414017 TNS2Q63HR2 1409 aa13.9□□□□□ -0.19
HLA-DMB-257ENST00000414017 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-257ENST00000414017 MARCH10Q8NA82 808 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-257ENST00000414017 NCAPD2Q15021 1401 aa13.89□□□□□ -0.19
HLA-DMB-257ENST00000414017 NEFMP07197 916 aa13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 ZNF530Q6P9A1 599 aaPredicted RBP13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 MIER1Q8N108 512 aa13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 PCDH11XQ9BZA7 1347 aa13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 PCDH11YQ9BZA8 1340 aa13.88□□□□□ -0.19
HLA-DMB-257ENST00000414017 KDRP35968 1356 aa13.87□□□□□ -0.19
HLA-DMB-257ENST00000414017 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
HLA-DMB-257ENST00000414017 FCHSD2O94868 740 aa13.86□□□□□ -0.19
HLA-DMB-257ENST00000414017 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
HLA-DMB-257ENST00000414017 C1orf141Q5JVX7 400 aa13.86□□□□□ -0.19
HLA-DMB-257ENST00000414017 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
HLA-DMB-257ENST00000414017 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
HLA-DMB-257ENST00000414017 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
HLA-DMB-257ENST00000414017 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-257ENST00000414017 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMB-257ENST00000414017 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-257ENST00000414017 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
HLA-DMB-257ENST00000414017 CYP27B1O15528 508 aa13.84□□□□□ -0.19
HLA-DMB-257ENST00000414017 FAM196AQ6ZSG2 479 aa13.84□□□□□ -0.19
HLA-DMB-257ENST00000414017 IFNL2Q8IZJ0 200 aa13.84□□□□□ -0.19
HLA-DMB-257ENST00000414017 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
HLA-DMB-257ENST00000414017 TRIM37O94972 964 aa13.83□□□□□ -0.2
HLA-DMB-257ENST00000414017 PHKG2P15735 406 aa13.83□□□□□ -0.2
HLA-DMB-257ENST00000414017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
HLA-DMB-257ENST00000414017 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
HLA-DMB-257ENST00000414017 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
HLA-DMB-257ENST00000414017 GAS2L2Q8NHY3 880 aa13.82□□□□□ -0.2
HLA-DMB-257ENST00000414017 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 KAT6BQ8WYB5 2073 aa13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 NEUROD2Q15784 382 aa13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
HLA-DMB-257ENST00000414017 KCNQ2O43526 872 aa13.8□□□□□ -0.2
HLA-DMB-257ENST00000414017 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
HLA-DMB-257ENST00000414017 PLEKHF1Q96S99 279 aa13.8□□□□□ -0.2
HLA-DMB-257ENST00000414017 EP400Q96L91 3159 aa13.79□□□□□ -0.2
HLA-DMB-257ENST00000414017 HSP90AB1P08238 724 aaKnown RBP13.79□□□□□ -0.2
HLA-DMB-257ENST00000414017 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
HLA-DMB-257ENST00000414017 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
HLA-DMB-257ENST00000414017 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
HLA-DMB-257ENST00000414017 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
HLA-DMB-257ENST00000414017 PTF1AQ7RTS3 328 aa13.78□□□□□ -0.2
HLA-DMB-257ENST00000414017 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
HLA-DMB-257ENST00000414017 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
HLA-DMB-257ENST00000414017 APBA3O96018 575 aa13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 CABP4P57796 275 aa13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 DOT1LQ8TEK3 1739 aa13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMB-257ENST00000414017 APAF1O14727 1248 aa13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 RNMTO43148 476 aaKnown RBP13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 RIPK4P57078 832 aa13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 MCM10Q7L590 875 aa13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
HLA-DMB-257ENST00000414017 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
HLA-DMB-257ENST00000414017 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-257ENST00000414017 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
HLA-DMB-257ENST00000414017 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 BAG6P46379 1132 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 TEFQ10587 303 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 NFATC2IPQ8NCF5 419 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 PIGBQ92521 554 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 BCL9O00512 1426 aa13.73□□□□□ -0.21
HLA-DMB-257ENST00000414017 NHSQ6T4R5 1651 aa13.72□□□□□ -0.21
HLA-DMB-257ENST00000414017 EN1Q05925 392 aaPredicted RBP13.72□□□□□ -0.21
HLA-DMB-257ENST00000414017 SOCS7O14512 581 aa13.71□□□□□ -0.21
HLA-DMB-257ENST00000414017 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
HLA-DMB-257ENST00000414017 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms