RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 FAM208AQ9UK61 1670 aaKnown RBP20.11■□□□□ 0.81
SNHG17-201ENST00000413755 RTL1A6NKG5 1358 aa20.1■□□□□ 0.81
SNHG17-201ENST00000413755 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
SNHG17-201ENST00000413755 TMF1P82094 1093 aa20.1■□□□□ 0.81
SNHG17-201ENST00000413755 SLC16A10Q8TF71 515 aa20.1■□□□□ 0.81
SNHG17-201ENST00000413755 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
SNHG17-201ENST00000413755 USP47Q96K76 1375 aa20.08■□□□□ 0.81
SNHG17-201ENST00000413755 ZNF784Q8NCA9 323 aaPredicted RBP20.08■□□□□ 0.81
SNHG17-201ENST00000413755 UTRNP46939 3433 aa20.07■□□□□ 0.8
SNHG17-201ENST00000413755 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
SNHG17-201ENST00000413755 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
SNHG17-201ENST00000413755 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
SNHG17-201ENST00000413755 CCNL1Q9UK58 526 aaPredicted RBP20.04■□□□□ 0.8
SNHG17-201ENST00000413755 INSRP06213 1382 aa20.04■□□□□ 0.8
SNHG17-201ENST00000413755 SHANK3Q9BYB0 1731 aa20.04■□□□□ 0.8
SNHG17-201ENST00000413755 RGPD2P0DJD1 1756 aa20.03■□□□□ 0.8
SNHG17-201ENST00000413755 POLD1P28340 1107 aa20.03■□□□□ 0.8
SNHG17-201ENST00000413755 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
SNHG17-201ENST00000413755 CARD14Q9BXL6 1004 aa20.03■□□□□ 0.8
SNHG17-201ENST00000413755 DOT1LQ8TEK3 1739 aa20.02■□□□□ 0.8
SNHG17-201ENST00000413755 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
SNHG17-201ENST00000413755 KAT6BQ8WYB5 2073 aa20.01■□□□□ 0.79
SNHG17-201ENST00000413755 CDCA8Q53HL2 280 aa20.01■□□□□ 0.79
SNHG17-201ENST00000413755 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
SNHG17-201ENST00000413755 FLT4P35916 1363 aa20■□□□□ 0.79
SNHG17-201ENST00000413755 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
SNHG17-201ENST00000413755 COL23A1Q86Y22 540 aaPredicted RBP20■□□□□ 0.79
SNHG17-201ENST00000413755 KLHL34Q8N239 644 aa20■□□□□ 0.79
SNHG17-201ENST00000413755 LY75O60449 1722 aa19.99■□□□□ 0.79
SNHG17-201ENST00000413755 QSER1Q2KHR3 1735 aa19.99■□□□□ 0.79
SNHG17-201ENST00000413755 KIF24Q5T7B8 1368 aa19.99■□□□□ 0.79
SNHG17-201ENST00000413755 GPR162Q16538 588 aa19.99■□□□□ 0.79
SNHG17-201ENST00000413755 CYP27B1O15528 508 aa19.98■□□□□ 0.79
SNHG17-201ENST00000413755 NLGN2Q8NFZ4 835 aa19.98■□□□□ 0.79
SNHG17-201ENST00000413755 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
SNHG17-201ENST00000413755 COL24A1Q17RW2 1714 aa19.98■□□□□ 0.79
SNHG17-201ENST00000413755 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
SNHG17-201ENST00000413755 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
SNHG17-201ENST00000413755 NSD3Q9BZ95 1437 aa19.95■□□□□ 0.78
SNHG17-201ENST00000413755 MPRIPQ6WCQ1 1025 aa19.95■□□□□ 0.78
SNHG17-201ENST00000413755 TUBGCP6Q96RT7 1819 aa19.95■□□□□ 0.78
SNHG17-201ENST00000413755 MSH5O43196 834 aa19.94■□□□□ 0.78
SNHG17-201ENST00000413755 PALLDQ8WX93 1383 aa19.94■□□□□ 0.78
SNHG17-201ENST00000413755 MSL1Q68DK7 614 aa19.92■□□□□ 0.78
SNHG17-201ENST00000413755 PELP1Q8IZL8 1130 aaKnown RBP19.92■□□□□ 0.78
SNHG17-201ENST00000413755 NCAPD2Q15021 1401 aa19.92■□□□□ 0.78
SNHG17-201ENST00000413755 NKX1-1Q15270 411 aaPredicted RBP19.91■□□□□ 0.78
SNHG17-201ENST00000413755 WASHC2AQ641Q2 1341 aa19.91■□□□□ 0.78
SNHG17-201ENST00000413755 KIF20BQ96Q89 1820 aa19.9■□□□□ 0.78
SNHG17-201ENST00000413755 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
SNHG17-201ENST00000413755 YBX3P16989 372 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNHG17-201ENST00000413755 AMIGO3Q86WK7 504 aa19.9■□□□□ 0.78
SNHG17-201ENST00000413755 PIGBQ92521 554 aa19.9■□□□□ 0.78
SNHG17-201ENST00000413755 TIMELESSQ9UNS1 1208 aa19.9■□□□□ 0.78
SNHG17-201ENST00000413755 EYA1Q99502 592 aa19.89■□□□□ 0.77
SNHG17-201ENST00000413755 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
SNHG17-201ENST00000413755 FLAD1Q8NFF5 587 aa19.88■□□□□ 0.77
SNHG17-201ENST00000413755 SMARCC1Q92922 1105 aaPredicted RBP19.88■□□□□ 0.77
SNHG17-201ENST00000413755 POLKQ9UBT6 870 aa19.88■□□□□ 0.77
SNHG17-201ENST00000413755 CHD4Q14839 1912 aa19.87■□□□□ 0.77
SNHG17-201ENST00000413755 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
SNHG17-201ENST00000413755 SPG7Q9UQ90 795 aa19.87■□□□□ 0.77
SNHG17-201ENST00000413755 TOGARAM1Q9Y4F4 1720 aa19.86■□□□□ 0.77
SNHG17-201ENST00000413755 SMIM5Q71RC9 77 aa19.86■□□□□ 0.77
SNHG17-201ENST00000413755 C5P01031 1676 aa19.85■□□□□ 0.77
SNHG17-201ENST00000413755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNHG17-201ENST00000413755 GRIN3BO60391 1043 aa19.84■□□□□ 0.77
SNHG17-201ENST00000413755 AK7Q96M32 723 aa19.84■□□□□ 0.77
SNHG17-201ENST00000413755 CD2APQ9Y5K6 639 aa19.84■□□□□ 0.77
SNHG17-201ENST00000413755 PKD1L3Q7Z443 1732 aa19.84■□□□□ 0.77
SNHG17-201ENST00000413755 LOC102724428A0A0B4J2F2 783 aa19.83■□□□□ 0.77
SNHG17-201ENST00000413755 SIK1P57059 783 aa19.83■□□□□ 0.77
SNHG17-201ENST00000413755 PHKG2P15735 406 aa19.82■□□□□ 0.76
SNHG17-201ENST00000413755 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
SNHG17-201ENST00000413755 LINC00116Q8NCU8 138 aa19.82■□□□□ 0.76
SNHG17-201ENST00000413755 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
SNHG17-201ENST00000413755 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
SNHG17-201ENST00000413755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.81■□□□□ 0.76
SNHG17-201ENST00000413755 PHF14O94880 888 aa19.81■□□□□ 0.76
SNHG17-201ENST00000413755 IFNL2Q8IZJ0 200 aa19.81■□□□□ 0.76
SNHG17-201ENST00000413755 TMOD3Q9NYL9 352 aa19.81■□□□□ 0.76
SNHG17-201ENST00000413755 C4BP0C0L5 1744 aa19.81■□□□□ 0.76
SNHG17-201ENST00000413755 ANKRD26Q9UPS8 1709 aa19.81■□□□□ 0.76
SNHG17-201ENST00000413755 ITPK1Q13572 414 aa19.8■□□□□ 0.76
SNHG17-201ENST00000413755 POLR3GLQ9BT43 218 aa19.8■□□□□ 0.76
SNHG17-201ENST00000413755 GOLGB1Q14789 3259 aaKnown RBP19.79■□□□□ 0.76
SNHG17-201ENST00000413755 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
SNHG17-201ENST00000413755 GIGYF1O75420 1035 aaPredicted RBP19.79■□□□□ 0.76
SNHG17-201ENST00000413755 SSFA2P28290 1259 aa19.79■□□□□ 0.76
SNHG17-201ENST00000413755 TNNT2P45379 298 aaPredicted RBP19.79■□□□□ 0.76
SNHG17-201ENST00000413755 ITGB4P16144 1822 aa19.79■□□□□ 0.76
SNHG17-201ENST00000413755 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
SNHG17-201ENST00000413755 ATG3Q9NT62 314 aa19.78■□□□□ 0.76
SNHG17-201ENST00000413755 ATP6V1AP38606 617 aa19.77■□□□□ 0.76
SNHG17-201ENST00000413755 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
SNHG17-201ENST00000413755 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
SNHG17-201ENST00000413755 IGSF1Q8N6C5 1336 aa19.76■□□□□ 0.75
SNHG17-201ENST00000413755 GNPATO15228 680 aa19.75■□□□□ 0.75
SNHG17-201ENST00000413755 PANK3Q9H999 370 aa19.75■□□□□ 0.75
SNHG17-201ENST00000413755 PLEKHG2Q9H7P9 1386 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms