RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
CSTF2-202ENST00000413437 SULT6B1Q6IMI4 303 aa10.43□□□□□ -0.74
CSTF2-202ENST00000413437 DEFB132Q7Z7B7 95 aa10.43□□□□□ -0.74
CSTF2-202ENST00000413437 ZCRB1Q8TBF4 217 aaKnown RBP10.43□□□□□ -0.74
CSTF2-202ENST00000413437 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
CSTF2-202ENST00000413437 FAM196AQ6ZSG2 479 aa10.42□□□□□ -0.74
CSTF2-202ENST00000413437 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
CSTF2-202ENST00000413437 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
CSTF2-202ENST00000413437 CYP27B1O15528 508 aa10.41□□□□□ -0.74
CSTF2-202ENST00000413437 SBF2Q86WG5 1849 aa10.41□□□□□ -0.74
CSTF2-202ENST00000413437 CCDC184Q52MB2 194 aa10.4□□□□□ -0.74
CSTF2-202ENST00000413437 PRKRIP1Q9H875 184 aaPredicted RBP10.4□□□□□ -0.74
CSTF2-202ENST00000413437 TNS1Q9HBL0 1735 aaKnown RBP10.4□□□□□ -0.74
CSTF2-202ENST00000413437 PKD1L3Q7Z443 1732 aa10.39□□□□□ -0.75
CSTF2-202ENST00000413437 EN1Q05925 392 aaPredicted RBP10.39□□□□□ -0.75
CSTF2-202ENST00000413437 RALBP1Q15311 655 aa10.39□□□□□ -0.75
CSTF2-202ENST00000413437 APBA3O96018 575 aa10.38□□□□□ -0.75
CSTF2-202ENST00000413437 EZH2Q15910 746 aaKnown RBP10.38□□□□□ -0.75
CSTF2-202ENST00000413437 CFAP53Q96M91 514 aa10.38□□□□□ -0.75
CSTF2-202ENST00000413437 KDRP35968 1356 aa10.38□□□□□ -0.75
CSTF2-202ENST00000413437 MYBBP1AQ9BQG0 1328 aaKnown RBP10.37□□□□□ -0.75
CSTF2-202ENST00000413437 PHKG2P15735 406 aa10.37□□□□□ -0.75
CSTF2-202ENST00000413437 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
CSTF2-202ENST00000413437 PHACTR3Q96KR7 559 aa10.37□□□□□ -0.75
CSTF2-202ENST00000413437 TOGARAM1Q9Y4F4 1720 aa10.37□□□□□ -0.75
CSTF2-202ENST00000413437 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
CSTF2-202ENST00000413437 BCL9O00512 1426 aa10.36□□□□□ -0.75
CSTF2-202ENST00000413437 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
CSTF2-202ENST00000413437 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSTF2-202ENST00000413437 MTHFSDQ2M296 383 aaKnown RBP10.36□□□□□ -0.75
CSTF2-202ENST00000413437 PLEKHO1Q53GL0 409 aaPredicted RBP10.36□□□□□ -0.75
CSTF2-202ENST00000413437 ZNF530Q6P9A1 599 aaPredicted RBP10.36□□□□□ -0.75
CSTF2-202ENST00000413437 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
CSTF2-202ENST00000413437 CAMKK2Q96RR4 588 aa10.36□□□□□ -0.75
CSTF2-202ENST00000413437 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
CSTF2-202ENST00000413437 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
CSTF2-202ENST00000413437 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
CSTF2-202ENST00000413437 PCDH11XQ9BZA7 1347 aa10.35□□□□□ -0.75
CSTF2-202ENST00000413437 PCDH11YQ9BZA8 1340 aa10.35□□□□□ -0.75
CSTF2-202ENST00000413437 NHSQ6T4R5 1651 aa10.35□□□□□ -0.75
CSTF2-202ENST00000413437 PRKAR2BP31323 418 aa10.35□□□□□ -0.75
CSTF2-202ENST00000413437 SF3B2Q13435 895 aaKnown RBP10.35□□□□□ -0.75
CSTF2-202ENST00000413437 PROM2Q8N271 834 aa10.35□□□□□ -0.75
CSTF2-202ENST00000413437 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
CSTF2-202ENST00000413437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.75
CSTF2-202ENST00000413437 BAG6P46379 1132 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 KCNQ4P56696 695 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
CSTF2-202ENST00000413437 MPRIPQ6WCQ1 1025 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 IFNL2Q8IZJ0 200 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 BTAF1O14981 1849 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 KAT6BQ8WYB5 2073 aa10.34□□□□□ -0.75
CSTF2-202ENST00000413437 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
CSTF2-202ENST00000413437 NUDCQ9Y266 331 aa10.33□□□□□ -0.76
CSTF2-202ENST00000413437 ITGB4P16144 1822 aa10.33□□□□□ -0.76
CSTF2-202ENST00000413437 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
CSTF2-202ENST00000413437 PIGBQ92521 554 aa10.32□□□□□ -0.76
CSTF2-202ENST00000413437 SENP3-EIF4A1A0A087X0R7 540 aa10.31□□□□□ -0.76
CSTF2-202ENST00000413437 FCHSD2O94868 740 aa10.31□□□□□ -0.76
CSTF2-202ENST00000413437 CCDC146Q8IYE0 955 aa10.31□□□□□ -0.76
CSTF2-202ENST00000413437 PLEKHF1Q96S99 279 aa10.31□□□□□ -0.76
CSTF2-202ENST00000413437 EP400Q96L91 3159 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 PLSCR1O15162 318 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
CSTF2-202ENST00000413437 ANP32CO43423 234 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 TXNRD1Q16881 649 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 C1orf141Q5JVX7 400 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 ASAP1Q9ULH1 1129 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 ADAMTS8Q9UP79 889 aa10.3□□□□□ -0.76
CSTF2-202ENST00000413437 RREB1Q92766 1687 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 DCTN1Q14203 1278 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 AKAP4Q5JQC9 854 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 NFATC2IPQ8NCF5 419 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 DCAF5Q96JK2 942 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 NUP188Q5SRE5 1749 aa10.29□□□□□ -0.76
CSTF2-202ENST00000413437 PSDA5PKW4 1024 aaPredicted RBP10.28□□□□□ -0.76
CSTF2-202ENST00000413437 ANO8Q9HCE9 1232 aaPredicted RBP10.28□□□□□ -0.76
CSTF2-202ENST00000413437 ATG3Q9NT62 314 aa10.28□□□□□ -0.76
CSTF2-202ENST00000413437 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
CSTF2-202ENST00000413437 RRP7AQ9Y3A4 280 aaKnown RBP10.28□□□□□ -0.76
CSTF2-202ENST00000413437 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
CSTF2-202ENST00000413437 VIRMAQ69YN4 1812 aaKnown RBP10.28□□□□□ -0.76
CSTF2-202ENST00000413437 PLEKHG2Q9H7P9 1386 aa10.27□□□□□ -0.76
CSTF2-202ENST00000413437 ERVV-2B6SEH9 535 aa10.27□□□□□ -0.77
CSTF2-202ENST00000413437 CABP4P57796 275 aa10.27□□□□□ -0.77
CSTF2-202ENST00000413437 MCM10Q7L590 875 aa10.27□□□□□ -0.77
CSTF2-202ENST00000413437 SLC4A9Q96Q91 983 aa10.27□□□□□ -0.77
CSTF2-202ENST00000413437 MAP3K5Q99683 1374 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 ADAMTS7Q9UKP4 1686 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 GNAT3A8MTJ3 354 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 HSP90AB1P08238 724 aaKnown RBP10.26□□□□□ -0.77
CSTF2-202ENST00000413437 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 R3HDM1Q15032 1099 aaKnown RBP10.26□□□□□ -0.77
CSTF2-202ENST00000413437 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSTF2-202ENST00000413437 SMIM5Q71RC9 77 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 GAS2L2Q8NHY3 880 aa10.26□□□□□ -0.77
CSTF2-202ENST00000413437 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms