RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TRMT44Q8IYL2 757 aaKnown RBP8.1□□□□□ -1.11
HMGB3P31-201ENST00000413333 KCTD15Q96SI1 283 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P31-201ENST00000413333 HINFPQ9BQA5 517 aa8.1□□□□□ -1.11
HMGB3P31-201ENST00000413333 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
HMGB3P31-201ENST00000413333 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
HMGB3P31-201ENST00000413333 SERPINB4P48594 390 aa8.09□□□□□ -1.11
HMGB3P31-201ENST00000413333 TRIM32Q13049 653 aa8.09□□□□□ -1.11
HMGB3P31-201ENST00000413333 MMRN1Q13201 1228 aa8.09□□□□□ -1.11
HMGB3P31-201ENST00000413333 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P31-201ENST00000413333 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
HMGB3P31-201ENST00000413333 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P31-201ENST00000413333 ARID5BQ14865 1188 aa8.08□□□□□ -1.12
HMGB3P31-201ENST00000413333 SPNS2Q8IVW8 549 aa8.08□□□□□ -1.12
HMGB3P31-201ENST00000413333 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
HMGB3P31-201ENST00000413333 VARSP26640 1264 aaKnown RBP8.07□□□□□ -1.12
HMGB3P31-201ENST00000413333 GGCXP38435 758 aa8.07□□□□□ -1.12
HMGB3P31-201ENST00000413333 SKOR1P84550 965 aa8.07□□□□□ -1.12
HMGB3P31-201ENST00000413333 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
HMGB3P31-201ENST00000413333 PLA2G2CQ5R387 149 aa8.07□□□□□ -1.12
HMGB3P31-201ENST00000413333 SOWAHDA6NJG2 315 aa8.06□□□□□ -1.12
HMGB3P31-201ENST00000413333 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
HMGB3P31-201ENST00000413333 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
HMGB3P31-201ENST00000413333 ANKLE1Q8NAG6 615 aa8.06□□□□□ -1.12
HMGB3P31-201ENST00000413333 CXXC1Q9P0U4 656 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P31-201ENST00000413333 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P31-201ENST00000413333 ABL1P00519 1130 aa8.05□□□□□ -1.12
HMGB3P31-201ENST00000413333 SCTRP47872 440 aa8.05□□□□□ -1.12
HMGB3P31-201ENST00000413333 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGB3P31-201ENST00000413333 WNT7BP56706 349 aa8.04□□□□□ -1.12
HMGB3P31-201ENST00000413333 TSEN2Q8NCE0 465 aaKnown RBP8.04□□□□□ -1.12
HMGB3P31-201ENST00000413333 EHBP1Q8NDI1 1231 aa8.04□□□□□ -1.12
HMGB3P31-201ENST00000413333 MKNK1Q9BUB5 465 aa8.04□□□□□ -1.12
HMGB3P31-201ENST00000413333 HCSTQ9UBK5 93 aa8.04□□□□□ -1.12
HMGB3P31-201ENST00000413333 OCLNQ16625 522 aa8.03□□□□□ -1.12
HMGB3P31-201ENST00000413333 C1orf216Q8TAB5 229 aa8.03□□□□□ -1.12
HMGB3P31-201ENST00000413333 ANO2Q9NQ90 1003 aa8.03□□□□□ -1.12
HMGB3P31-201ENST00000413333 TMPRSS4Q9NRS4 437 aa8.03□□□□□ -1.12
HMGB3P31-201ENST00000413333 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
HMGB3P31-201ENST00000413333 ITGBL1O95965 494 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 FSHRP23945 695 aa8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 ZNF211Q13398 564 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 CC2D2BQ6DHV5 1058 aa8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 CYLDQ9NQC7 956 aa8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
HMGB3P31-201ENST00000413333 CD2BP2O95400 341 aaKnown RBP8.01□□□□□ -1.13
HMGB3P31-201ENST00000413333 TAS1R3Q7RTX0 852 aa8.01□□□□□ -1.13
HMGB3P31-201ENST00000413333 ZNF358Q9NW07 568 aa8.01□□□□□ -1.13
HMGB3P31-201ENST00000413333 STAU1O95793 577 aaKnown RBP8□□□□□ -1.13
HMGB3P31-201ENST00000413333 RPIAP49247 311 aa8□□□□□ -1.13
HMGB3P31-201ENST00000413333 AMOTL2Q9Y2J4 779 aa8□□□□□ -1.13
HMGB3P31-201ENST00000413333 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
HMGB3P31-201ENST00000413333 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 E9PSI1 815 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 H3BRB1 525 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 M0R2N6 131 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 TUT1Q9H6E5 874 aaKnown RBP7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
HMGB3P31-201ENST00000413333 WEE1P30291 646 aa7.98□□□□□ -1.13
HMGB3P31-201ENST00000413333 GDF10P55107 478 aa7.98□□□□□ -1.13
HMGB3P31-201ENST00000413333 FKBP5Q13451 457 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P31-201ENST00000413333 GLYCTKQ8IVS8 523 aa7.98□□□□□ -1.13
HMGB3P31-201ENST00000413333 GTF3C2Q8WUA4 911 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P31-201ENST00000413333 CDK15Q96Q40 435 aa7.98□□□□□ -1.13
HMGB3P31-201ENST00000413333 BACH1O14867 736 aa7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 GRM5P41594 1212 aa7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 CAPN12Q6ZSI9 719 aa7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 ZNF784Q8NCA9 323 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 PURBQ96QR8 312 aaKnown RBP7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 EGFL7Q9UHF1 273 aa7.97□□□□□ -1.13
HMGB3P31-201ENST00000413333 ICMTO60725 284 aa7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 SCNN1DP51172 638 aa7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 NAA30Q147X3 362 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 DNAJC14Q6Y2X3 702 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 SCG3Q8WXD2 468 aaKnown RBP7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 TRIM52Q96A61 297 aa7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 DNMT3AQ9Y6K1 912 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P31-201ENST00000413333 MYT1Q01538 1121 aa7.95□□□□□ -1.14
HMGB3P31-201ENST00000413333 MTMR3Q13615 1198 aa7.95□□□□□ -1.14
HMGB3P31-201ENST00000413333 PPP1R26Q5T8A7 1209 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P31-201ENST00000413333 CHMP7Q8WUX9 453 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P31-201ENST00000413333 VTI1AQ96AJ9 217 aa7.95□□□□□ -1.14
HMGB3P31-201ENST00000413333 PTCD1O75127 700 aaKnown RBP7.94□□□□□ -1.14
HMGB3P31-201ENST00000413333 ADH1CP00326 375 aa7.94□□□□□ -1.14
HMGB3P31-201ENST00000413333 INHAP05111 366 aa7.94□□□□□ -1.14
HMGB3P31-201ENST00000413333 ERCC3P19447 782 aa7.94□□□□□ -1.14
HMGB3P31-201ENST00000413333 IGFBP4P22692 258 aa7.94□□□□□ -1.14
HMGB3P31-201ENST00000413333 ETNK1Q9HBU6 452 aa7.94□□□□□ -1.14
HMGB3P31-201ENST00000413333 ATAD2Q6PL18 1390 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms