RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 HSP90AB2PQ58FF8 381 aa26.81■■□□□ 1.88
CPSF7-204ENST00000413232 PRIM1P49642 420 aaKnown RBP26.8■■□□□ 1.88
CPSF7-204ENST00000413232 ZCRB1Q8TBF4 217 aaKnown RBP26.8■■□□□ 1.88
CPSF7-204ENST00000413232 NSD2O96028 1365 aa26.78■■□□□ 1.88
CPSF7-204ENST00000413232 NSD3Q9BZ95 1437 aa26.78■■□□□ 1.88
CPSF7-204ENST00000413232 KCNQ4P56696 695 aa26.77■■□□□ 1.88
CPSF7-204ENST00000413232 SGIP1Q9BQI5 828 aa26.77■■□□□ 1.88
CPSF7-204ENST00000413232 MAP2P11137 1827 aaKnown RBP26.76■■□□□ 1.88
CPSF7-204ENST00000413232 LY75O60449 1722 aa26.76■■□□□ 1.88
CPSF7-204ENST00000413232 INSRP06213 1382 aa26.76■■□□□ 1.87
CPSF7-204ENST00000413232 CLSPNQ9HAW4 1339 aa26.76■■□□□ 1.87
CPSF7-204ENST00000413232 SYTL4Q96C24 671 aaPredicted RBP26.76■■□□□ 1.87
CPSF7-204ENST00000413232 TUBGCP6Q96RT7 1819 aa26.76■■□□□ 1.87
CPSF7-204ENST00000413232 EMILIN1Q9Y6C2 1016 aa26.75■■□□□ 1.87
CPSF7-204ENST00000413232 AKT1S1Q96B36 256 aa26.74■■□□□ 1.87
CPSF7-204ENST00000413232 MTFR1LQ9H019 292 aa26.74■■□□□ 1.87
CPSF7-204ENST00000413232 FLT4P35916 1363 aa26.73■■□□□ 1.87
CPSF7-204ENST00000413232 QSER1Q2KHR3 1735 aa26.72■■□□□ 1.87
CPSF7-204ENST00000413232 SMG6Q86US8 1419 aaKnown RBP26.71■■□□□ 1.87
CPSF7-204ENST00000413232 ANKRD26Q9UPS8 1709 aa26.7■■□□□ 1.87
CPSF7-204ENST00000413232 SLC27A3Q5K4L6 730 aa26.7■■□□□ 1.86
CPSF7-204ENST00000413232 RAPGEF4Q8WZA2 1011 aa26.7■■□□□ 1.86
CPSF7-204ENST00000413232 KIF24Q5T7B8 1368 aa26.7■■□□□ 1.86
CPSF7-204ENST00000413232 FHDC1Q9C0D6 1143 aaPredicted RBP26.69■■□□□ 1.86
CPSF7-204ENST00000413232 CGNL1Q0VF96 1302 aa26.68■■□□□ 1.86
CPSF7-204ENST00000413232 UTRNP46939 3433 aa26.68■■□□□ 1.86
CPSF7-204ENST00000413232 TATP17735 454 aaPredicted RBP26.68■■□□□ 1.86
CPSF7-204ENST00000413232 SYT17Q9BSW7 474 aa26.67■■□□□ 1.86
CPSF7-204ENST00000413232 YY1P25490 414 aa26.66■■□□□ 1.86
CPSF7-204ENST00000413232 POLR3GLQ9BT43 218 aa26.66■■□□□ 1.86
CPSF7-204ENST00000413232 ITGB4P16144 1822 aa26.66■■□□□ 1.86
CPSF7-204ENST00000413232 PNPLA7Q6ZV29 1317 aa26.65■■□□□ 1.86
CPSF7-204ENST00000413232 PPM1GO15355 546 aaPredicted RBP26.65■■□□□ 1.86
CPSF7-204ENST00000413232 CYP27B1O15528 508 aa26.65■■□□□ 1.86
CPSF7-204ENST00000413232 COL24A1Q17RW2 1714 aa26.65■■□□□ 1.86
CPSF7-204ENST00000413232 TOGARAM1Q9Y4F4 1720 aa26.65■■□□□ 1.86
CPSF7-204ENST00000413232 PKD1L3Q7Z443 1732 aa26.64■■□□□ 1.85
CPSF7-204ENST00000413232 NCAPD2Q15021 1401 aa26.63■■□□□ 1.85
CPSF7-204ENST00000413232 HSPA5P11021 654 aaKnown RBP26.62■■□□□ 1.85
CPSF7-204ENST00000413232 ARXQ96QS3 562 aa26.62■■□□□ 1.85
CPSF7-204ENST00000413232 CCNL1Q9UK58 526 aaPredicted RBP26.62■■□□□ 1.85
CPSF7-204ENST00000413232 WASHC2AQ641Q2 1341 aa26.62■■□□□ 1.85
CPSF7-204ENST00000413232 POLKQ9UBT6 870 aa26.61■■□□□ 1.85
CPSF7-204ENST00000413232 PCDH11XQ9BZA7 1347 aa26.61■■□□□ 1.85
CPSF7-204ENST00000413232 PCDH11YQ9BZA8 1340 aa26.61■■□□□ 1.85
CPSF7-204ENST00000413232 TAF1LQ8IZX4 1826 aa26.6■■□□□ 1.85
CPSF7-204ENST00000413232 DCAF8L1A6NGE4 600 aa26.6■■□□□ 1.85
CPSF7-204ENST00000413232 TFCP2L1Q9NZI6 479 aa26.6■■□□□ 1.85
CPSF7-204ENST00000413232 EYA1Q99502 592 aa26.59■■□□□ 1.85
CPSF7-204ENST00000413232 EIF4G2P78344 907 aaKnown RBP eCLIP26.58■■□□□ 1.85
CPSF7-204ENST00000413232 TNNT2P45379 298 aaPredicted RBP26.57■■□□□ 1.84
CPSF7-204ENST00000413232 SLC16A10Q8TF71 515 aa26.57■■□□□ 1.84
CPSF7-204ENST00000413232 C5P01031 1676 aa26.57■■□□□ 1.84
CPSF7-204ENST00000413232 MPRIPQ6WCQ1 1025 aa26.56■■□□□ 1.84
CPSF7-204ENST00000413232 CCER1Q8TC90 406 aaPredicted RBP26.55■■□□□ 1.84
CPSF7-204ENST00000413232 PANK3Q9H999 370 aa26.55■■□□□ 1.84
CPSF7-204ENST00000413232 CHD4Q14839 1912 aa26.54■■□□□ 1.84
CPSF7-204ENST00000413232 COL23A1Q86Y22 540 aaPredicted RBP26.53■■□□□ 1.84
CPSF7-204ENST00000413232 MAP3K5Q99683 1374 aa26.53■■□□□ 1.84
CPSF7-204ENST00000413232 EIF4A2Q14240 407 aaKnown RBP26.52■■□□□ 1.84
CPSF7-204ENST00000413232 NKX1-1Q15270 411 aaPredicted RBP26.52■■□□□ 1.84
CPSF7-204ENST00000413232 PALLDQ8WX93 1383 aa26.52■■□□□ 1.84
CPSF7-204ENST00000413232 GOLGB1Q14789 3259 aaKnown RBP26.51■■□□□ 1.83
CPSF7-204ENST00000413232 PIGBQ92521 554 aa26.5■■□□□ 1.83
CPSF7-204ENST00000413232 SPG7Q9UQ90 795 aa26.49■■□□□ 1.83
CPSF7-204ENST00000413232 POLD1P28340 1107 aa26.47■■□□□ 1.83
CPSF7-204ENST00000413232 AMIGO3Q86WK7 504 aa26.47■■□□□ 1.83
CPSF7-204ENST00000413232 KLHL34Q8N239 644 aa26.47■■□□□ 1.83
CPSF7-204ENST00000413232 C4BP0C0L5 1744 aa26.46■■□□□ 1.83
CPSF7-204ENST00000413232 MSH5O43196 834 aa26.46■■□□□ 1.83
CPSF7-204ENST00000413232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.46■■□□□ 1.834e-9■■■□□ 15.2
CPSF7-204ENST00000413232 UBR3Q6ZT12 1888 aa26.45■■□□□ 1.83
CPSF7-204ENST00000413232 PHKG2P15735 406 aa26.44■■□□□ 1.82
CPSF7-204ENST00000413232 MSL1Q68DK7 614 aa26.44■■□□□ 1.82
CPSF7-204ENST00000413232 SMIM5Q71RC9 77 aa26.44■■□□□ 1.82
CPSF7-204ENST00000413232 NLGN2Q8NFZ4 835 aa26.44■■□□□ 1.82
CPSF7-204ENST00000413232 SMARCC1Q92922 1105 aaPredicted RBP26.43■■□□□ 1.82
CPSF7-204ENST00000413232 IGSF1Q8N6C5 1336 aa26.42■■□□□ 1.82
CPSF7-204ENST00000413232 IFNL2Q8IZJ0 200 aa26.41■■□□□ 1.82
CPSF7-204ENST00000413232 ASAP1Q9ULH1 1129 aa26.41■■□□□ 1.82
CPSF7-204ENST00000413232 TMOD3Q9NYL9 352 aa26.39■■□□□ 1.82
CPSF7-204ENST00000413232 LOC102724428A0A0B4J2F2 783 aa26.38■■□□□ 1.81
CPSF7-204ENST00000413232 SIK1P57059 783 aa26.38■■□□□ 1.81
CPSF7-204ENST00000413232 GPR162Q16538 588 aa26.38■■□□□ 1.81
CPSF7-204ENST00000413232 ZNF784Q8NCA9 323 aaPredicted RBP26.38■■□□□ 1.81
CPSF7-204ENST00000413232 LINC00116Q8NCU8 138 aa26.38■■□□□ 1.81
CPSF7-204ENST00000413232 MORC1Q86VD1 984 aa26.37■■□□□ 1.81
CPSF7-204ENST00000413232 ITPK1Q13572 414 aa26.36■■□□□ 1.81
CPSF7-204ENST00000413232 ATG3Q9NT62 314 aa26.36■■□□□ 1.81
CPSF7-204ENST00000413232 AEBP1Q8IUX7 1158 aa26.35■■□□□ 1.81
CPSF7-204ENST00000413232 AK7Q96M32 723 aa26.35■■□□□ 1.81
CPSF7-204ENST00000413232 FLAD1Q8NFF5 587 aa26.34■■□□□ 1.81
CPSF7-204ENST00000413232 PHF14O94880 888 aa26.33■■□□□ 1.81
CPSF7-204ENST00000413232 PELP1Q8IZL8 1130 aaKnown RBP26.33■■□□□ 1.81
CPSF7-204ENST00000413232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.32■■□□□ 1.8
CPSF7-204ENST00000413232 AMER1Q5JTC6 1135 aaPredicted RBP26.32■■□□□ 1.8
CPSF7-204ENST00000413232 KNSTRNQ9Y448 316 aa26.32■■□□□ 1.8
CPSF7-204ENST00000413232 KIF7Q2M1P5 1343 aa26.32■■□□□ 1.8
CPSF7-204ENST00000413232 PLEKHG2Q9H7P9 1386 aa26.32■■□□□ 1.8
CPSF7-204ENST00000413232 YBX3P16989 372 aaKnown RBP eCLIP26.31■■□□□ 1.83e-7■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms