RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
SMIM29-203ENST00000413013 ST20-MTHFSA0A0A6YYL1 179 aa24.6■■□□□ 1.53
SMIM29-203ENST00000413013 KLHL34Q8N239 644 aa24.6■■□□□ 1.53
SMIM29-203ENST00000413013 TESK2Q96S53 571 aa24.6■■□□□ 1.53
SMIM29-203ENST00000413013 TFCP2L1Q9NZI6 479 aa24.6■■□□□ 1.53
SMIM29-203ENST00000413013 TUBGCP6Q96RT7 1819 aa24.6■■□□□ 1.53
SMIM29-203ENST00000413013 LY75O60449 1722 aa24.6■■□□□ 1.53
SMIM29-203ENST00000413013 RGPD2P0DJD1 1756 aa24.59■■□□□ 1.53
SMIM29-203ENST00000413013 ZCRB1Q8TBF4 217 aaKnown RBP24.59■■□□□ 1.53
SMIM29-203ENST00000413013 MEGF6O75095 1541 aa24.59■■□□□ 1.53
SMIM29-203ENST00000413013 PNPLA7Q6ZV29 1317 aa24.58■■□□□ 1.52
SMIM29-203ENST00000413013 COL24A1Q17RW2 1714 aa24.58■■□□□ 1.52
SMIM29-203ENST00000413013 PRIM1P49642 420 aaKnown RBP24.57■■□□□ 1.52
SMIM29-203ENST00000413013 GPR162Q16538 588 aa24.57■■□□□ 1.52
SMIM29-203ENST00000413013 CGNL1Q0VF96 1302 aa24.56■■□□□ 1.52
SMIM29-203ENST00000413013 NSD2O96028 1365 aa24.55■■□□□ 1.52
SMIM29-203ENST00000413013 USP47Q96K76 1375 aa24.54■■□□□ 1.52
SMIM29-203ENST00000413013 CCNL1Q9UK58 526 aaPredicted RBP24.54■■□□□ 1.52
SMIM29-203ENST00000413013 RAPGEF4Q8WZA2 1011 aa24.53■■□□□ 1.52
SMIM29-203ENST00000413013 KIF20BQ96Q89 1820 aa24.53■■□□□ 1.52
SMIM29-203ENST00000413013 TMF1P82094 1093 aa24.52■■□□□ 1.52
SMIM29-203ENST00000413013 KCNQ4P56696 695 aa24.51■■□□□ 1.51
SMIM29-203ENST00000413013 RRS1Q15050 365 aaKnown RBP24.51■■□□□ 1.51
SMIM29-203ENST00000413013 PELP1Q8IZL8 1130 aaKnown RBP24.51■■□□□ 1.51
SMIM29-203ENST00000413013 FBLN1P23142 703 aa24.5■■□□□ 1.51
SMIM29-203ENST00000413013 MSH5O43196 834 aa24.49■■□□□ 1.51
SMIM29-203ENST00000413013 HMGB2P26583 209 aaKnown RBP24.49■■□□□ 1.51
SMIM29-203ENST00000413013 GGNBP2Q9H3C7 697 aa24.49■■□□□ 1.51
SMIM29-203ENST00000413013 C5P01031 1676 aa24.48■■□□□ 1.51
SMIM29-203ENST00000413013 TATP17735 454 aaPredicted RBP24.48■■□□□ 1.51
SMIM29-203ENST00000413013 NBPF6Q5VWK0 638 aa24.48■■□□□ 1.51
SMIM29-203ENST00000413013 NBPF4Q96M43 638 aa24.48■■□□□ 1.51
SMIM29-203ENST00000413013 PCDH11XQ9BZA7 1347 aa24.48■■□□□ 1.51
SMIM29-203ENST00000413013 PCDH11YQ9BZA8 1340 aa24.48■■□□□ 1.51
SMIM29-203ENST00000413013 FLT4P35916 1363 aa24.47■■□□□ 1.51
SMIM29-203ENST00000413013 CDCA8Q53HL2 280 aa24.47■■□□□ 1.51
SMIM29-203ENST00000413013 USHBP1Q8N6Y0 703 aa24.47■■□□□ 1.51
SMIM29-203ENST00000413013 KIF24Q5T7B8 1368 aa24.46■■□□□ 1.51
SMIM29-203ENST00000413013 FYB1O15117 783 aa24.46■■□□□ 1.51
SMIM29-203ENST00000413013 INSRP06213 1382 aa24.45■■□□□ 1.5
SMIM29-203ENST00000413013 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
SMIM29-203ENST00000413013 C1QTNF8P60827 252 aa24.42■■□□□ 1.5
SMIM29-203ENST00000413013 NLGN2Q8NFZ4 835 aa24.42■■□□□ 1.5
SMIM29-203ENST00000413013 PALLDQ8WX93 1383 aa24.42■■□□□ 1.5
SMIM29-203ENST00000413013 GIGYF1O75420 1035 aaPredicted RBP24.4■■□□□ 1.5
SMIM29-203ENST00000413013 COL23A1Q86Y22 540 aaPredicted RBP24.4■■□□□ 1.5
SMIM29-203ENST00000413013 PKD1L3Q7Z443 1732 aa24.39■■□□□ 1.5
SMIM29-203ENST00000413013 GRIN3BO60391 1043 aa24.39■■□□□ 1.49
SMIM29-203ENST00000413013 HSP90AB2PQ58FF8 381 aa24.39■■□□□ 1.49
SMIM29-203ENST00000413013 FLAD1Q8NFF5 587 aa24.39■■□□□ 1.49
SMIM29-203ENST00000413013 TAF1LQ8IZX4 1826 aa24.39■■□□□ 1.49
SMIM29-203ENST00000413013 GOLGB1Q14789 3259 aaKnown RBP24.38■■□□□ 1.49
SMIM29-203ENST00000413013 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
SMIM29-203ENST00000413013 TOGARAM1Q9Y4F4 1720 aa24.37■■□□□ 1.49
SMIM29-203ENST00000413013 NSD3Q9BZ95 1437 aa24.36■■□□□ 1.49
SMIM29-203ENST00000413013 C4BP0C0L5 1744 aa24.36■■□□□ 1.49
SMIM29-203ENST00000413013 MPRIPQ6WCQ1 1025 aa24.36■■□□□ 1.49
SMIM29-203ENST00000413013 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
SMIM29-203ENST00000413013 SMARCC1Q92922 1105 aaPredicted RBP24.36■■□□□ 1.49
SMIM29-203ENST00000413013 ITGB4P16144 1822 aa24.35■■□□□ 1.49
SMIM29-203ENST00000413013 ANKRD26Q9UPS8 1709 aa24.35■■□□□ 1.49
SMIM29-203ENST00000413013 AK7Q96M32 723 aa24.34■■□□□ 1.49
SMIM29-203ENST00000413013 CYP27B1O15528 508 aa24.32■■□□□ 1.48
SMIM29-203ENST00000413013 YBX3P16989 372 aaKnown RBP eCLIP24.32■■□□□ 1.483e-7■■■■□ 20
SMIM29-203ENST00000413013 EMILIN1Q9Y6C2 1016 aa24.32■■□□□ 1.48
SMIM29-203ENST00000413013 SPG7Q9UQ90 795 aa24.31■■□□□ 1.48
SMIM29-203ENST00000413013 CD2APQ9Y5K6 639 aa24.31■■□□□ 1.48
SMIM29-203ENST00000413013 NCAPD2Q15021 1401 aa24.3■■□□□ 1.48
SMIM29-203ENST00000413013 PPM1GO15355 546 aaPredicted RBP24.3■■□□□ 1.48
SMIM29-203ENST00000413013 UBR3Q6ZT12 1888 aa24.28■■□□□ 1.48
SMIM29-203ENST00000413013 PHF14O94880 888 aa24.26■■□□□ 1.47
SMIM29-203ENST00000413013 CARD14Q9BXL6 1004 aa24.26■■□□□ 1.47
SMIM29-203ENST00000413013 TMOD3Q9NYL9 352 aa24.25■■□□□ 1.47
SMIM29-203ENST00000413013 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
SMIM29-203ENST00000413013 PIGBQ92521 554 aa24.24■■□□□ 1.47
SMIM29-203ENST00000413013 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
SMIM29-203ENST00000413013 ATP10DQ9P241 1426 aa24.24■■□□□ 1.47
SMIM29-203ENST00000413013 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
SMIM29-203ENST00000413013 SSFA2P28290 1259 aa24.23■■□□□ 1.47
SMIM29-203ENST00000413013 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
SMIM29-203ENST00000413013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.22■■□□□ 1.47
SMIM29-203ENST00000413013 LOC102724428A0A0B4J2F2 783 aa24.22■■□□□ 1.47
SMIM29-203ENST00000413013 SIK1P57059 783 aa24.22■■□□□ 1.47
SMIM29-203ENST00000413013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.22■■□□□ 1.47
SMIM29-203ENST00000413013 PLEKHG2Q9H7P9 1386 aa24.2■■□□□ 1.46
SMIM29-203ENST00000413013 IGSF1Q8N6C5 1336 aa24.19■■□□□ 1.46
SMIM29-203ENST00000413013 IFNL2Q8IZJ0 200 aa24.19■■□□□ 1.46
SMIM29-203ENST00000413013 EYA1Q99502 592 aa24.19■■□□□ 1.46
SMIM29-203ENST00000413013 LINC00116Q8NCU8 138 aa24.18■■□□□ 1.46
SMIM29-203ENST00000413013 GPBP1L1Q9HC44 474 aaPredicted RBP24.18■■□□□ 1.46
SMIM29-203ENST00000413013 GNPATO15228 680 aa24.17■■□□□ 1.46
SMIM29-203ENST00000413013 PHKG2P15735 406 aa24.17■■□□□ 1.46
SMIM29-203ENST00000413013 AMIGO3Q86WK7 504 aa24.17■■□□□ 1.46
SMIM29-203ENST00000413013 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
SMIM29-203ENST00000413013 ATP6V1AP38606 617 aa24.16■■□□□ 1.46
SMIM29-203ENST00000413013 ADCY9O60503 1353 aa24.16■■□□□ 1.46
SMIM29-203ENST00000413013 POLR3GLQ9BT43 218 aa24.15■■□□□ 1.46
SMIM29-203ENST00000413013 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
SMIM29-203ENST00000413013 ASAP1Q9ULH1 1129 aa24.14■■□□□ 1.45
SMIM29-203ENST00000413013 ITPK1Q13572 414 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms