RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 AKT1S1Q96B36 256 aa26.05■■□□□ 1.76
ITGA6-204ENST00000412899 RGPD2P0DJD1 1756 aa26.04■■□□□ 1.76
ITGA6-204ENST00000412899 CDCA8Q53HL2 280 aa26.03■■□□□ 1.76
ITGA6-204ENST00000412899 NBPF6Q5VWK0 638 aa26.03■■□□□ 1.76
ITGA6-204ENST00000412899 NBPF4Q96M43 638 aa26.03■■□□□ 1.76
ITGA6-204ENST00000412899 SMG6Q86US8 1419 aaKnown RBP26.03■■□□□ 1.76
ITGA6-204ENST00000412899 MEGF6O75095 1541 aa26.03■■□□□ 1.76
ITGA6-204ENST00000412899 KCNQ4P56696 695 aa26.02■■□□□ 1.76
ITGA6-204ENST00000412899 USHBP1Q8N6Y0 703 aa26.02■■□□□ 1.76
ITGA6-204ENST00000412899 SLC16A10Q8TF71 515 aa26.02■■□□□ 1.76
ITGA6-204ENST00000412899 TFCP2L1Q9NZI6 479 aa26.02■■□□□ 1.76
ITGA6-204ENST00000412899 DOT1LQ8TEK3 1739 aa26.01■■□□□ 1.75
ITGA6-204ENST00000412899 RAPGEF4Q8WZA2 1011 aa26.01■■□□□ 1.75
ITGA6-204ENST00000412899 CLSPNQ9HAW4 1339 aa26.01■■□□□ 1.75
ITGA6-204ENST00000412899 CGNL1Q0VF96 1302 aa25.99■■□□□ 1.75
ITGA6-204ENST00000412899 PNPLA7Q6ZV29 1317 aa25.99■■□□□ 1.75
ITGA6-204ENST00000412899 CCER1Q8TC90 406 aaPredicted RBP25.99■■□□□ 1.75
ITGA6-204ENST00000412899 NSD2O96028 1365 aa25.98■■□□□ 1.75
ITGA6-204ENST00000412899 POLD1P28340 1107 aa25.98■■□□□ 1.75
ITGA6-204ENST00000412899 SHANK3Q9BYB0 1731 aa25.97■■□□□ 1.75
ITGA6-204ENST00000412899 TATP17735 454 aaPredicted RBP25.97■■□□□ 1.75
ITGA6-204ENST00000412899 HSP90AB2PQ58FF8 381 aa25.97■■□□□ 1.75
ITGA6-204ENST00000412899 KLHL34Q8N239 644 aa25.97■■□□□ 1.75
ITGA6-204ENST00000412899 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
ITGA6-204ENST00000412899 MAP3K5Q99683 1374 aa25.96■■□□□ 1.75
ITGA6-204ENST00000412899 INSRP06213 1382 aa25.95■■□□□ 1.75
ITGA6-204ENST00000412899 FLT4P35916 1363 aa25.95■■□□□ 1.74
ITGA6-204ENST00000412899 QSER1Q2KHR3 1735 aa25.94■■□□□ 1.74
ITGA6-204ENST00000412899 LY75O60449 1722 aa25.94■■□□□ 1.74
ITGA6-204ENST00000412899 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
ITGA6-204ENST00000412899 ZNF784Q8NCA9 323 aaPredicted RBP25.92■■□□□ 1.74
ITGA6-204ENST00000412899 KIF24Q5T7B8 1368 aa25.92■■□□□ 1.74
ITGA6-204ENST00000412899 PCDH11XQ9BZA7 1347 aa25.91■■□□□ 1.74
ITGA6-204ENST00000412899 PCDH11YQ9BZA8 1340 aa25.91■■□□□ 1.74
ITGA6-204ENST00000412899 GPR162Q16538 588 aa25.91■■□□□ 1.74
ITGA6-204ENST00000412899 TIMELESSQ9UNS1 1208 aa25.91■■□□□ 1.74
ITGA6-204ENST00000412899 MSH5O43196 834 aa25.9■■□□□ 1.74
ITGA6-204ENST00000412899 CARD14Q9BXL6 1004 aa25.9■■□□□ 1.74
ITGA6-204ENST00000412899 NSD3Q9BZ95 1437 aa25.88■■□□□ 1.73
ITGA6-204ENST00000412899 TUBGCP6Q96RT7 1819 aa25.88■■□□□ 1.73
ITGA6-204ENST00000412899 EMILIN1Q9Y6C2 1016 aa25.88■■□□□ 1.73
ITGA6-204ENST00000412899 PPM1GO15355 546 aaPredicted RBP25.87■■□□□ 1.73
ITGA6-204ENST00000412899 PELP1Q8IZL8 1130 aaKnown RBP25.87■■□□□ 1.73
ITGA6-204ENST00000412899 MPRIPQ6WCQ1 1025 aa25.86■■□□□ 1.73
ITGA6-204ENST00000412899 COL23A1Q86Y22 540 aaPredicted RBP25.85■■□□□ 1.73
ITGA6-204ENST00000412899 CHD4Q14839 1912 aa25.84■■□□□ 1.73
ITGA6-204ENST00000412899 CYP27B1O15528 508 aa25.84■■□□□ 1.73
ITGA6-204ENST00000412899 HMGB2P26583 209 aaKnown RBP25.84■■□□□ 1.73
ITGA6-204ENST00000412899 COL24A1Q17RW2 1714 aa25.84■■□□□ 1.73
ITGA6-204ENST00000412899 PALLDQ8WX93 1383 aa25.83■■□□□ 1.73
ITGA6-204ENST00000412899 NLGN2Q8NFZ4 835 aa25.81■■□□□ 1.72
ITGA6-204ENST00000412899 MSL1Q68DK7 614 aa25.79■■□□□ 1.72
ITGA6-204ENST00000412899 FLAD1Q8NFF5 587 aa25.79■■□□□ 1.72
ITGA6-204ENST00000412899 SMARCC1Q92922 1105 aaPredicted RBP25.79■■□□□ 1.72
ITGA6-204ENST00000412899 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
ITGA6-204ENST00000412899 SPG7Q9UQ90 795 aa25.79■■□□□ 1.72
ITGA6-204ENST00000412899 C5P01031 1676 aa25.78■■□□□ 1.72
ITGA6-204ENST00000412899 WASHC2AQ641Q2 1341 aa25.78■■□□□ 1.72
ITGA6-204ENST00000412899 PKD1L3Q7Z443 1732 aa25.75■■□□□ 1.71
ITGA6-204ENST00000412899 PIGBQ92521 554 aa25.75■■□□□ 1.71
ITGA6-204ENST00000412899 AK7Q96M32 723 aa25.75■■□□□ 1.71
ITGA6-204ENST00000412899 EYA1Q99502 592 aa25.75■■□□□ 1.71
ITGA6-204ENST00000412899 NCAPD2Q15021 1401 aa25.74■■□□□ 1.71
ITGA6-204ENST00000412899 NKX1-1Q15270 411 aaPredicted RBP25.74■■□□□ 1.71
ITGA6-204ENST00000412899 TOGARAM1Q9Y4F4 1720 aa25.74■■□□□ 1.71
ITGA6-204ENST00000412899 POLKQ9UBT6 870 aa25.73■■□□□ 1.71
ITGA6-204ENST00000412899 ITGB4P16144 1822 aa25.72■■□□□ 1.71
ITGA6-204ENST00000412899 ANKRD26Q9UPS8 1709 aa25.72■■□□□ 1.71
ITGA6-204ENST00000412899 TAF1LQ8IZX4 1826 aa25.72■■□□□ 1.71
ITGA6-204ENST00000412899 GRIN3BO60391 1043 aa25.71■■□□□ 1.71
ITGA6-204ENST00000412899 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
ITGA6-204ENST00000412899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.71■■□□□ 1.713e-7■■■□□ 15
ITGA6-204ENST00000412899 MAP2P11137 1827 aaKnown RBP25.71■■□□□ 1.71
ITGA6-204ENST00000412899 UTRNP46939 3433 aa25.7■■□□□ 1.71
ITGA6-204ENST00000412899 TMOD3Q9NYL9 352 aa25.7■■□□□ 1.7
ITGA6-204ENST00000412899 C4BP0C0L5 1744 aa25.69■■□□□ 1.7
ITGA6-204ENST00000412899 PHF14O94880 888 aa25.69■■□□□ 1.7
ITGA6-204ENST00000412899 YBX3P16989 372 aaKnown RBP eCLIP25.69■■□□□ 1.7
ITGA6-204ENST00000412899 IFNL2Q8IZJ0 200 aa25.69■■□□□ 1.7
ITGA6-204ENST00000412899 C1QTNF8P60827 252 aa25.68■■□□□ 1.7
ITGA6-204ENST00000412899 CD2APQ9Y5K6 639 aa25.68■■□□□ 1.7
ITGA6-204ENST00000412899 LOC102724428A0A0B4J2F2 783 aa25.67■■□□□ 1.7
ITGA6-204ENST00000412899 PHKG2P15735 406 aa25.67■■□□□ 1.7
ITGA6-204ENST00000412899 SIK1P57059 783 aa25.67■■□□□ 1.7
ITGA6-204ENST00000412899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.66■■□□□ 1.7
ITGA6-204ENST00000412899 EIF4A2Q14240 407 aaKnown RBP25.66■■□□□ 1.7
ITGA6-204ENST00000412899 EIF4G2P78344 907 aaKnown RBP eCLIP25.65■■□□□ 1.7
ITGA6-204ENST00000412899 SMIM5Q71RC9 77 aa25.65■■□□□ 1.7
ITGA6-204ENST00000412899 AMIGO3Q86WK7 504 aa25.65■■□□□ 1.7
ITGA6-204ENST00000412899 SENP3-EIF4A1A0A087X0R7 540 aa25.64■■□□□ 1.7
ITGA6-204ENST00000412899 LINC00116Q8NCU8 138 aa25.64■■□□□ 1.7
ITGA6-204ENST00000412899 ASAP1Q9ULH1 1129 aa25.64■■□□□ 1.7
ITGA6-204ENST00000412899 GIGYF1O75420 1035 aaPredicted RBP25.63■■□□□ 1.69
ITGA6-204ENST00000412899 SSFA2P28290 1259 aa25.63■■□□□ 1.69
ITGA6-204ENST00000412899 ATP6V1AP38606 617 aa25.63■■□□□ 1.69
ITGA6-204ENST00000412899 PANK3Q9H999 370 aa25.61■■□□□ 1.69
ITGA6-204ENST00000412899 UBR3Q6ZT12 1888 aa25.61■■□□□ 1.69
ITGA6-204ENST00000412899 GNPATO15228 680 aa25.6■■□□□ 1.69
ITGA6-204ENST00000412899 HSPA5P11021 654 aaKnown RBP25.6■■□□□ 1.69
ITGA6-204ENST00000412899 ITPK1Q13572 414 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 638.9 ms