RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 CHRNA2Q15822 529 aa12.55□□□□□ -0.4
VSIG4-202ENST00000412866 MCM10Q7L590 875 aa12.55□□□□□ -0.4
VSIG4-202ENST00000412866 CRB1P82279 1406 aa12.54□□□□□ -0.4
VSIG4-202ENST00000412866 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
VSIG4-202ENST00000412866 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
VSIG4-202ENST00000412866 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 EXOC6Q8TAG9 804 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
VSIG4-202ENST00000412866 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
VSIG4-202ENST00000412866 C20orf194Q5TEA3 1177 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 CRBNQ96SW2 442 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
VSIG4-202ENST00000412866 COL22A1Q8NFW1 1626 aaPredicted RBP12.52□□□□□ -0.41
VSIG4-202ENST00000412866 CHL1O00533 1208 aa12.52□□□□□ -0.41
VSIG4-202ENST00000412866 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
VSIG4-202ENST00000412866 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
VSIG4-202ENST00000412866 TOM1O60784 492 aa12.51□□□□□ -0.41
VSIG4-202ENST00000412866 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
VSIG4-202ENST00000412866 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
VSIG4-202ENST00000412866 COL16A1Q07092 1604 aaPredicted RBP12.5□□□□□ -0.41
VSIG4-202ENST00000412866 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
VSIG4-202ENST00000412866 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
VSIG4-202ENST00000412866 ZNF530Q6P9A1 599 aaPredicted RBP12.5□□□□□ -0.41
VSIG4-202ENST00000412866 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
VSIG4-202ENST00000412866 SSH1Q8WYL5 1049 aa12.5□□□□□ -0.41
VSIG4-202ENST00000412866 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
VSIG4-202ENST00000412866 PHLPP1O60346 1717 aa12.5□□□□□ -0.41
VSIG4-202ENST00000412866 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
VSIG4-202ENST00000412866 ALDH1L2Q3SY69 923 aa12.49□□□□□ -0.41
VSIG4-202ENST00000412866 AKAP4Q5JQC9 854 aa12.49□□□□□ -0.41
VSIG4-202ENST00000412866 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
VSIG4-202ENST00000412866 MEGF6O75095 1541 aa12.49□□□□□ -0.41
VSIG4-202ENST00000412866 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
VSIG4-202ENST00000412866 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
VSIG4-202ENST00000412866 VAMP4O75379 141 aa12.48□□□□□ -0.41
VSIG4-202ENST00000412866 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
VSIG4-202ENST00000412866 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
VSIG4-202ENST00000412866 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
VSIG4-202ENST00000412866 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
VSIG4-202ENST00000412866 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
VSIG4-202ENST00000412866 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
VSIG4-202ENST00000412866 KIF16BQ96L93 1317 aa12.48□□□□□ -0.41
VSIG4-202ENST00000412866 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
VSIG4-202ENST00000412866 C8orf58Q8NAV2 365 aa12.47□□□□□ -0.41
VSIG4-202ENST00000412866 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
VSIG4-202ENST00000412866 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
VSIG4-202ENST00000412866 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.41
VSIG4-202ENST00000412866 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.41
VSIG4-202ENST00000412866 PKD1L3Q7Z443 1732 aa12.46□□□□□ -0.42
VSIG4-202ENST00000412866 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.42
VSIG4-202ENST00000412866 MS4A1P11836 297 aa12.46□□□□□ -0.42
VSIG4-202ENST00000412866 BRPF1P55201 1214 aaPredicted RBP12.46□□□□□ -0.42
VSIG4-202ENST00000412866 TOM1L2Q6ZVM7 507 aa12.46□□□□□ -0.42
VSIG4-202ENST00000412866 PANK1Q8TE04 598 aa12.46□□□□□ -0.42
VSIG4-202ENST00000412866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.42
VSIG4-202ENST00000412866 SPG7Q9UQ90 795 aa12.46□□□□□ -0.42
VSIG4-202ENST00000412866 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
VSIG4-202ENST00000412866 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
VSIG4-202ENST00000412866 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
VSIG4-202ENST00000412866 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
VSIG4-202ENST00000412866 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
VSIG4-202ENST00000412866 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
VSIG4-202ENST00000412866 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
VSIG4-202ENST00000412866 EVA1CP58658 441 aa12.44□□□□□ -0.42
VSIG4-202ENST00000412866 KRT24Q2M2I5 525 aa12.44□□□□□ -0.42
VSIG4-202ENST00000412866 ATF7IPQ6VMQ6 1270 aa12.44□□□□□ -0.42
VSIG4-202ENST00000412866 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
VSIG4-202ENST00000412866 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
VSIG4-202ENST00000412866 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
VSIG4-202ENST00000412866 LGR6Q9HBX8 967 aa12.44□□□□□ -0.42
VSIG4-202ENST00000412866 NOB1Q9ULX3 412 aaKnown RBP12.44□□□□□ -0.42
VSIG4-202ENST00000412866 RLBP1P12271 317 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 TRIM27P14373 513 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 TEFQ10587 303 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
VSIG4-202ENST00000412866 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 TNNQ9UQP3 1299 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
VSIG4-202ENST00000412866 KDM3BQ7LBC6 1761 aa12.42□□□□□ -0.42
VSIG4-202ENST00000412866 PHKG2P15735 406 aa12.42□□□□□ -0.42
VSIG4-202ENST00000412866 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
VSIG4-202ENST00000412866 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
VSIG4-202ENST00000412866 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
VSIG4-202ENST00000412866 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
VSIG4-202ENST00000412866 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
VSIG4-202ENST00000412866 BTG4Q9NY30 223 aa12.41□□□□□ -0.42
VSIG4-202ENST00000412866 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
VSIG4-202ENST00000412866 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.42
VSIG4-202ENST00000412866 AAMPQ13685 434 aa12.4□□□□□ -0.42
VSIG4-202ENST00000412866 MVPQ14764 893 aaKnown RBP12.4□□□□□ -0.42
VSIG4-202ENST00000412866 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
VSIG4-202ENST00000412866 SIPA1L3O60292 1781 aaPredicted RBP12.4□□□□□ -0.42
VSIG4-202ENST00000412866 PLCH1Q4KWH8 1693 aa12.4□□□□□ -0.42
VSIG4-202ENST00000412866 MRC1P22897 1456 aa12.4□□□□□ -0.43
VSIG4-202ENST00000412866 BTBD11A6QL63 1104 aa12.4□□□□□ -0.43
VSIG4-202ENST00000412866 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms