RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
LINC00388-201ENST00000412714 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
LINC00388-201ENST00000412714 DOT1LQ8TEK3 1739 aa17.55■□□□□ 0.4
LINC00388-201ENST00000412714 MEGF6O75095 1541 aa17.54■□□□□ 0.4
LINC00388-201ENST00000412714 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
LINC00388-201ENST00000412714 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
LINC00388-201ENST00000412714 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
LINC00388-201ENST00000412714 RAPGEF4Q8WZA2 1011 aa17.53■□□□□ 0.4
LINC00388-201ENST00000412714 SHANK3Q9BYB0 1731 aa17.52■□□□□ 0.4
LINC00388-201ENST00000412714 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
LINC00388-201ENST00000412714 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.4
LINC00388-201ENST00000412714 NBPF4Q96M43 638 aa17.52■□□□□ 0.4
LINC00388-201ENST00000412714 FLT4P35916 1363 aa17.52■□□□□ 0.39
LINC00388-201ENST00000412714 USHBP1Q8N6Y0 703 aa17.51■□□□□ 0.39
LINC00388-201ENST00000412714 FHDC1Q9C0D6 1143 aaPredicted RBP17.51■□□□□ 0.39
LINC00388-201ENST00000412714 INSRP06213 1382 aa17.51■□□□□ 0.39
LINC00388-201ENST00000412714 KIF24Q5T7B8 1368 aa17.51■□□□□ 0.39
LINC00388-201ENST00000412714 NSD3Q9BZ95 1437 aa17.5■□□□□ 0.39
LINC00388-201ENST00000412714 TATP17735 454 aaPredicted RBP17.5■□□□□ 0.39
LINC00388-201ENST00000412714 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
LINC00388-201ENST00000412714 ARXQ96QS3 562 aa17.5■□□□□ 0.39
LINC00388-201ENST00000412714 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
LINC00388-201ENST00000412714 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
LINC00388-201ENST00000412714 SYT17Q9BSW7 474 aa17.49■□□□□ 0.39
LINC00388-201ENST00000412714 NSD2O96028 1365 aa17.49■□□□□ 0.39
LINC00388-201ENST00000412714 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
LINC00388-201ENST00000412714 LY75O60449 1722 aa17.48■□□□□ 0.39
LINC00388-201ENST00000412714 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
LINC00388-201ENST00000412714 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
LINC00388-201ENST00000412714 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
LINC00388-201ENST00000412714 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
LINC00388-201ENST00000412714 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
LINC00388-201ENST00000412714 POLD1P28340 1107 aa17.46■□□□□ 0.39
LINC00388-201ENST00000412714 KCNQ4P56696 695 aa17.46■□□□□ 0.39
LINC00388-201ENST00000412714 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
LINC00388-201ENST00000412714 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
LINC00388-201ENST00000412714 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
LINC00388-201ENST00000412714 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
LINC00388-201ENST00000412714 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
LINC00388-201ENST00000412714 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
LINC00388-201ENST00000412714 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
LINC00388-201ENST00000412714 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
LINC00388-201ENST00000412714 KLHL34Q8N239 644 aa17.42■□□□□ 0.38
LINC00388-201ENST00000412714 UTRNP46939 3433 aa17.41■□□□□ 0.38
LINC00388-201ENST00000412714 MSH5O43196 834 aa17.41■□□□□ 0.38
LINC00388-201ENST00000412714 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
LINC00388-201ENST00000412714 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
LINC00388-201ENST00000412714 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
LINC00388-201ENST00000412714 CHD4Q14839 1912 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 COL24A1Q17RW2 1714 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 PKD1L3Q7Z443 1732 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 CYP27B1O15528 508 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
LINC00388-201ENST00000412714 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
LINC00388-201ENST00000412714 C5P01031 1676 aa17.38■□□□□ 0.37
LINC00388-201ENST00000412714 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
LINC00388-201ENST00000412714 GPR162Q16538 588 aa17.37■□□□□ 0.37
LINC00388-201ENST00000412714 SMARCC1Q92922 1105 aaPredicted RBP17.37■□□□□ 0.37
LINC00388-201ENST00000412714 ITGB4P16144 1822 aa17.37■□□□□ 0.37
LINC00388-201ENST00000412714 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
LINC00388-201ENST00000412714 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00388-201ENST00000412714 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
LINC00388-201ENST00000412714 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
LINC00388-201ENST00000412714 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
LINC00388-201ENST00000412714 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
LINC00388-201ENST00000412714 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
LINC00388-201ENST00000412714 EYA1Q99502 592 aa17.34■□□□□ 0.37
LINC00388-201ENST00000412714 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
LINC00388-201ENST00000412714 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.36
LINC00388-201ENST00000412714 AK7Q96M32 723 aa17.33■□□□□ 0.36
LINC00388-201ENST00000412714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC00388-201ENST00000412714 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
LINC00388-201ENST00000412714 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
LINC00388-201ENST00000412714 PIGBQ92521 554 aa17.32■□□□□ 0.36
LINC00388-201ENST00000412714 C4BP0C0L5 1744 aa17.31■□□□□ 0.36
LINC00388-201ENST00000412714 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
LINC00388-201ENST00000412714 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
LINC00388-201ENST00000412714 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
LINC00388-201ENST00000412714 TMOD3Q9NYL9 352 aa17.31■□□□□ 0.36
LINC00388-201ENST00000412714 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
LINC00388-201ENST00000412714 PANK3Q9H999 370 aa17.29■□□□□ 0.36
LINC00388-201ENST00000412714 LOC102724428A0A0B4J2F2 783 aa17.28■□□□□ 0.36
LINC00388-201ENST00000412714 PHKG2P15735 406 aa17.28■□□□□ 0.36
LINC00388-201ENST00000412714 SIK1P57059 783 aa17.28■□□□□ 0.36
LINC00388-201ENST00000412714 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
LINC00388-201ENST00000412714 GOLGB1Q14789 3259 aaKnown RBP17.27■□□□□ 0.36
LINC00388-201ENST00000412714 UBR3Q6ZT12 1888 aa17.27■□□□□ 0.35
LINC00388-201ENST00000412714 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
LINC00388-201ENST00000412714 PHF14O94880 888 aa17.26■□□□□ 0.35
LINC00388-201ENST00000412714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
LINC00388-201ENST00000412714 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
LINC00388-201ENST00000412714 SSFA2P28290 1259 aa17.25■□□□□ 0.35
LINC00388-201ENST00000412714 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
LINC00388-201ENST00000412714 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
LINC00388-201ENST00000412714 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
LINC00388-201ENST00000412714 MORC1Q86VD1 984 aa17.24■□□□□ 0.35
LINC00388-201ENST00000412714 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
LINC00388-201ENST00000412714 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms