RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 FLT4P35916 1363 aa15.99■□□□□ 0.15
LINC00963-201ENST00000412141 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
LINC00963-201ENST00000412141 STK32BQ9NY57 414 aa15.98■□□□□ 0.15
LINC00963-201ENST00000412141 MEGF6O75095 1541 aa15.98■□□□□ 0.15
LINC00963-201ENST00000412141 INSRP06213 1382 aa15.98■□□□□ 0.15
LINC00963-201ENST00000412141 ZBTB7AO95365 584 aa15.96■□□□□ 0.15
LINC00963-201ENST00000412141 KCNQ4P56696 695 aa15.96■□□□□ 0.15
LINC00963-201ENST00000412141 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
LINC00963-201ENST00000412141 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
LINC00963-201ENST00000412141 POLKQ9UBT6 870 aa15.95■□□□□ 0.14
LINC00963-201ENST00000412141 FAM208AQ9UK61 1670 aaKnown RBP15.95■□□□□ 0.14
LINC00963-201ENST00000412141 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
LINC00963-201ENST00000412141 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
LINC00963-201ENST00000412141 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
LINC00963-201ENST00000412141 CASZ1Q86V15 1759 aa15.93■□□□□ 0.14
LINC00963-201ENST00000412141 LRRC4BQ9NT99 713 aa15.93■□□□□ 0.14
LINC00963-201ENST00000412141 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
LINC00963-201ENST00000412141 BTAF1O14981 1849 aa15.91■□□□□ 0.14
LINC00963-201ENST00000412141 KIF24Q5T7B8 1368 aa15.91■□□□□ 0.14
LINC00963-201ENST00000412141 UTRNP46939 3433 aa15.91■□□□□ 0.14
LINC00963-201ENST00000412141 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
LINC00963-201ENST00000412141 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
LINC00963-201ENST00000412141 EYA1Q99502 592 aa15.91■□□□□ 0.14
LINC00963-201ENST00000412141 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
LINC00963-201ENST00000412141 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
LINC00963-201ENST00000412141 CYP27B1O15528 508 aa15.89■□□□□ 0.13
LINC00963-201ENST00000412141 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
LINC00963-201ENST00000412141 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
LINC00963-201ENST00000412141 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
LINC00963-201ENST00000412141 PCDH11XQ9BZA7 1347 aa15.89■□□□□ 0.13
LINC00963-201ENST00000412141 PCDH11YQ9BZA8 1340 aa15.89■□□□□ 0.13
LINC00963-201ENST00000412141 MAP2P11137 1827 aaKnown RBP15.89■□□□□ 0.13
LINC00963-201ENST00000412141 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
LINC00963-201ENST00000412141 DOT1LQ8TEK3 1739 aa15.87■□□□□ 0.13
LINC00963-201ENST00000412141 NSD2O96028 1365 aa15.87■□□□□ 0.13
LINC00963-201ENST00000412141 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
LINC00963-201ENST00000412141 SLC27A3Q5K4L6 730 aa15.86■□□□□ 0.13
LINC00963-201ENST00000412141 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
LINC00963-201ENST00000412141 PTGER2P43116 358 aa15.85■□□□□ 0.13
LINC00963-201ENST00000412141 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
LINC00963-201ENST00000412141 MSH5O43196 834 aa15.84■□□□□ 0.13
LINC00963-201ENST00000412141 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
LINC00963-201ENST00000412141 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
LINC00963-201ENST00000412141 PAPPAQ13219 1627 aa15.83■□□□□ 0.13
LINC00963-201ENST00000412141 YY1P25490 414 aa15.83■□□□□ 0.12
LINC00963-201ENST00000412141 CC2D1BQ5T0F9 858 aaKnown RBP15.82■□□□□ 0.12
LINC00963-201ENST00000412141 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
LINC00963-201ENST00000412141 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
LINC00963-201ENST00000412141 PIGBQ92521 554 aa15.81■□□□□ 0.12
LINC00963-201ENST00000412141 ANKRD26Q9UPS8 1709 aa15.81■□□□□ 0.12
LINC00963-201ENST00000412141 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
LINC00963-201ENST00000412141 PNPLA7Q6ZV29 1317 aa15.8■□□□□ 0.12
LINC00963-201ENST00000412141 PHKG2P15735 406 aa15.8■□□□□ 0.12
LINC00963-201ENST00000412141 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
LINC00963-201ENST00000412141 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
LINC00963-201ENST00000412141 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
LINC00963-201ENST00000412141 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
LINC00963-201ENST00000412141 FHDC1Q9C0D6 1143 aaPredicted RBP15.79■□□□□ 0.12
LINC00963-201ENST00000412141 TMOD3Q9NYL9 352 aa15.79■□□□□ 0.12
LINC00963-201ENST00000412141 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
LINC00963-201ENST00000412141 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
LINC00963-201ENST00000412141 ARXQ96QS3 562 aa15.78■□□□□ 0.12
LINC00963-201ENST00000412141 SGIP1Q9BQI5 828 aa15.78■□□□□ 0.12
LINC00963-201ENST00000412141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC00963-201ENST00000412141 MTHFSP49914 203 aa15.77■□□□□ 0.12
LINC00963-201ENST00000412141 PLEKHO1Q53GL0 409 aaPredicted RBP15.77■□□□□ 0.12
LINC00963-201ENST00000412141 MSL1Q68DK7 614 aa15.77■□□□□ 0.12
LINC00963-201ENST00000412141 SULT6B1Q6IMI4 303 aa15.77■□□□□ 0.12
LINC00963-201ENST00000412141 ZNF530Q6P9A1 599 aaPredicted RBP15.77■□□□□ 0.12
LINC00963-201ENST00000412141 SMIM5Q71RC9 77 aa15.77■□□□□ 0.12
LINC00963-201ENST00000412141 SMARCC1Q92922 1105 aaPredicted RBP15.77■□□□□ 0.12
LINC00963-201ENST00000412141 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
LINC00963-201ENST00000412141 PER1O15534 1290 aaPredicted RBP15.76■□□□□ 0.11
LINC00963-201ENST00000412141 COL23A1Q86Y22 540 aaPredicted RBP15.76■□□□□ 0.11
LINC00963-201ENST00000412141 SYT17Q9BSW7 474 aa15.76■□□□□ 0.11
LINC00963-201ENST00000412141 PKD1L3Q7Z443 1732 aa15.76■□□□□ 0.11
LINC00963-201ENST00000412141 TOGARAM1Q9Y4F4 1720 aa15.75■□□□□ 0.11
LINC00963-201ENST00000412141 LY75O60449 1722 aa15.74■□□□□ 0.11
LINC00963-201ENST00000412141 POLD1P28340 1107 aa15.74■□□□□ 0.11
LINC00963-201ENST00000412141 IL13P35225 146 aa15.74■□□□□ 0.11
LINC00963-201ENST00000412141 SLC16A10Q8TF71 515 aa15.74■□□□□ 0.11
LINC00963-201ENST00000412141 GOLGB1Q14789 3259 aaKnown RBP15.74■□□□□ 0.11
LINC00963-201ENST00000412141 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
LINC00963-201ENST00000412141 PHF14O94880 888 aa15.73■□□□□ 0.11
LINC00963-201ENST00000412141 HMOX1P09601 288 aa15.73■□□□□ 0.11
LINC00963-201ENST00000412141 SIK1P57059 783 aa15.73■□□□□ 0.11
LINC00963-201ENST00000412141 AK7Q96M32 723 aa15.73■□□□□ 0.11
LINC00963-201ENST00000412141 ITGB4P16144 1822 aa15.73■□□□□ 0.11
LINC00963-201ENST00000412141 ATP6V1AP38606 617 aa15.72■□□□□ 0.11
LINC00963-201ENST00000412141 AMOTQ4VCS5 1084 aa15.72■□□□□ 0.11
LINC00963-201ENST00000412141 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
LINC00963-201ENST00000412141 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
LINC00963-201ENST00000412141 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
LINC00963-201ENST00000412141 CABP4P57796 275 aa15.71■□□□□ 0.11
LINC00963-201ENST00000412141 ITPK1Q13572 414 aa15.71■□□□□ 0.11
LINC00963-201ENST00000412141 AMIGO3Q86WK7 504 aa15.71■□□□□ 0.11
LINC00963-201ENST00000412141 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
LINC00963-201ENST00000412141 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
LINC00963-201ENST00000412141 HSP90AB1P08238 724 aaKnown RBP15.7■□□□□ 0.1
LINC00963-201ENST00000412141 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms