RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HSP90AB2PQ58FF8 381 aa23.09■■□□□ 1.29
SCAMP4-203ENST00000411971 PPP1R1BQ9UD71 204 aaPredicted RBP23.09■■□□□ 1.29
SCAMP4-203ENST00000411971 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
SCAMP4-203ENST00000411971 NSD3Q9BZ95 1437 aa23.08■■□□□ 1.28
SCAMP4-203ENST00000411971 SGIP1Q9BQI5 828 aa23.07■■□□□ 1.28
SCAMP4-203ENST00000411971 PRIM1P49642 420 aaKnown RBP23.06■■□□□ 1.28
SCAMP4-203ENST00000411971 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
SCAMP4-203ENST00000411971 ANKRD26Q9UPS8 1709 aa23.05■■□□□ 1.28
SCAMP4-203ENST00000411971 ZCRB1Q8TBF4 217 aaKnown RBP23.05■■□□□ 1.28
SCAMP4-203ENST00000411971 EMILIN1Q9Y6C2 1016 aa23.05■■□□□ 1.28
SCAMP4-203ENST00000411971 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
SCAMP4-203ENST00000411971 INSRP06213 1382 aa23.04■■□□□ 1.28
SCAMP4-203ENST00000411971 AKT1S1Q96B36 256 aa23.03■■□□□ 1.28
SCAMP4-203ENST00000411971 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
SCAMP4-203ENST00000411971 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
SCAMP4-203ENST00000411971 UTRNP46939 3433 aa23.01■■□□□ 1.27
SCAMP4-203ENST00000411971 COL24A1Q17RW2 1714 aa23.01■■□□□ 1.27
SCAMP4-203ENST00000411971 FLT4P35916 1363 aa23.01■■□□□ 1.27
SCAMP4-203ENST00000411971 CDCA8Q53HL2 280 aa23■■□□□ 1.27
SCAMP4-203ENST00000411971 MTFR1LQ9H019 292 aa23■■□□□ 1.27
SCAMP4-203ENST00000411971 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
SCAMP4-203ENST00000411971 ITGB4P16144 1822 aa23■■□□□ 1.27
SCAMP4-203ENST00000411971 PKD1L3Q7Z443 1732 aa22.99■■□□□ 1.27
SCAMP4-203ENST00000411971 FHDC1Q9C0D6 1143 aaPredicted RBP22.98■■□□□ 1.27
SCAMP4-203ENST00000411971 PNPLA7Q6ZV29 1317 aa22.97■■□□□ 1.27
SCAMP4-203ENST00000411971 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
SCAMP4-203ENST00000411971 SYT17Q9BSW7 474 aa22.96■■□□□ 1.27
SCAMP4-203ENST00000411971 NCAPD2Q15021 1401 aa22.96■■□□□ 1.27
SCAMP4-203ENST00000411971 SMG6Q86US8 1419 aaKnown RBP22.96■■□□□ 1.27
SCAMP4-203ENST00000411971 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
SCAMP4-203ENST00000411971 CYP27B1O15528 508 aa22.95■■□□□ 1.26
SCAMP4-203ENST00000411971 SLC27A3Q5K4L6 730 aa22.95■■□□□ 1.26
SCAMP4-203ENST00000411971 KIF24Q5T7B8 1368 aa22.95■■□□□ 1.26
SCAMP4-203ENST00000411971 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
SCAMP4-203ENST00000411971 YY1P25490 414 aa22.94■■□□□ 1.26
SCAMP4-203ENST00000411971 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
SCAMP4-203ENST00000411971 C5P01031 1676 aa22.93■■□□□ 1.26
SCAMP4-203ENST00000411971 CGNL1Q0VF96 1302 aa22.92■■□□□ 1.26
SCAMP4-203ENST00000411971 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
SCAMP4-203ENST00000411971 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
SCAMP4-203ENST00000411971 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
SCAMP4-203ENST00000411971 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
SCAMP4-203ENST00000411971 ARXQ96QS3 562 aa22.9■■□□□ 1.26
SCAMP4-203ENST00000411971 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.26
SCAMP4-203ENST00000411971 PCDH11XQ9BZA7 1347 aa22.89■■□□□ 1.26
SCAMP4-203ENST00000411971 PCDH11YQ9BZA8 1340 aa22.89■■□□□ 1.26
SCAMP4-203ENST00000411971 EYA1Q99502 592 aa22.89■■□□□ 1.25
SCAMP4-203ENST00000411971 CCNL1Q9UK58 526 aaPredicted RBP22.89■■□□□ 1.25
SCAMP4-203ENST00000411971 TNNT2P45379 298 aaPredicted RBP22.87■■□□□ 1.25
SCAMP4-203ENST00000411971 TFCP2L1Q9NZI6 479 aa22.87■■□□□ 1.25
SCAMP4-203ENST00000411971 GOLGB1Q14789 3259 aaKnown RBP22.85■■□□□ 1.25
SCAMP4-203ENST00000411971 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
SCAMP4-203ENST00000411971 AMIGO3Q86WK7 504 aa22.85■■□□□ 1.25
SCAMP4-203ENST00000411971 COL23A1Q86Y22 540 aaPredicted RBP22.85■■□□□ 1.25
SCAMP4-203ENST00000411971 CHD4Q14839 1912 aa22.84■■□□□ 1.25
SCAMP4-203ENST00000411971 PALLDQ8WX93 1383 aa22.84■■□□□ 1.25
SCAMP4-203ENST00000411971 MAP3K5Q99683 1374 aa22.84■■□□□ 1.25
SCAMP4-203ENST00000411971 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.25
SCAMP4-203ENST00000411971 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.25
SCAMP4-203ENST00000411971 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
SCAMP4-203ENST00000411971 SLC16A10Q8TF71 515 aa22.83■■□□□ 1.25
SCAMP4-203ENST00000411971 PANK3Q9H999 370 aa22.83■■□□□ 1.25
SCAMP4-203ENST00000411971 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
SCAMP4-203ENST00000411971 PIGBQ92521 554 aa22.82■■□□□ 1.24
SCAMP4-203ENST00000411971 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
SCAMP4-203ENST00000411971 NKX1-1Q15270 411 aaPredicted RBP22.81■■□□□ 1.24
SCAMP4-203ENST00000411971 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
SCAMP4-203ENST00000411971 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
SCAMP4-203ENST00000411971 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
SCAMP4-203ENST00000411971 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
SCAMP4-203ENST00000411971 KLHL34Q8N239 644 aa22.77■■□□□ 1.24
SCAMP4-203ENST00000411971 PHKG2P15735 406 aa22.76■■□□□ 1.23
SCAMP4-203ENST00000411971 SPG7Q9UQ90 795 aa22.75■■□□□ 1.23
SCAMP4-203ENST00000411971 IGSF1Q8N6C5 1336 aa22.75■■□□□ 1.23
SCAMP4-203ENST00000411971 MSH5O43196 834 aa22.74■■□□□ 1.23
SCAMP4-203ENST00000411971 POLD1P28340 1107 aa22.74■■□□□ 1.23
SCAMP4-203ENST00000411971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.74■■□□□ 1.23
SCAMP4-203ENST00000411971 ASAP1Q9ULH1 1129 aa22.74■■□□□ 1.23
SCAMP4-203ENST00000411971 ITPK1Q13572 414 aa22.72■■□□□ 1.23
SCAMP4-203ENST00000411971 ZNF784Q8NCA9 323 aaPredicted RBP22.72■■□□□ 1.23
SCAMP4-203ENST00000411971 LINC00116Q8NCU8 138 aa22.72■■□□□ 1.23
SCAMP4-203ENST00000411971 AEBP1Q8IUX7 1158 aa22.71■■□□□ 1.23
SCAMP4-203ENST00000411971 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.22
SCAMP4-203ENST00000411971 SMARCC1Q92922 1105 aaPredicted RBP22.7■■□□□ 1.22
SCAMP4-203ENST00000411971 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
SCAMP4-203ENST00000411971 LOC102724428A0A0B4J2F2 783 aa22.69■■□□□ 1.22
SCAMP4-203ENST00000411971 SIK1P57059 783 aa22.69■■□□□ 1.22
SCAMP4-203ENST00000411971 YBX3P16989 372 aaKnown RBP eCLIP22.68■■□□□ 1.226e-7■□□□□ 11.3
SCAMP4-203ENST00000411971 GPR162Q16538 588 aa22.68■■□□□ 1.22
SCAMP4-203ENST00000411971 SLC4A9Q96Q91 983 aa22.68■■□□□ 1.22
SCAMP4-203ENST00000411971 ATG3Q9NT62 314 aa22.68■■□□□ 1.22
SCAMP4-203ENST00000411971 TMOD3Q9NYL9 352 aa22.68■■□□□ 1.22
SCAMP4-203ENST00000411971 PHF14O94880 888 aa22.67■■□□□ 1.22
SCAMP4-203ENST00000411971 KDRP35968 1356 aa22.66■■□□□ 1.22
SCAMP4-203ENST00000411971 COL5A3P25940 1745 aaPredicted RBP22.66■■□□□ 1.22
SCAMP4-203ENST00000411971 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
SCAMP4-203ENST00000411971 MORC1Q86VD1 984 aa22.66■■□□□ 1.22
SCAMP4-203ENST00000411971 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
SCAMP4-203ENST00000411971 MYH14Q7Z406 1995 aaKnown RBP22.65■■□□□ 1.22
SCAMP4-203ENST00000411971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms