RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 UTP14CQ5TAP6 766 aaKnown RBP5.34□□□□□ -1.55
PTPN13-202ENST00000411767 RUFY3Q7L099 469 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 ATRIPQ8WXE1 791 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 EIF2S2P20042 333 aaKnown RBP5.34□□□□□ -1.55
PTPN13-202ENST00000411767 TRPC3Q13507 836 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 CTCFLQ8NI51 663 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-202ENST00000411767 PPP1R14CQ8TAE6 165 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 FLOT2Q14254 428 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 ERCC6LQ2NKX8 1250 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC38Q502W7 563 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 MCTP1Q6DN14 999 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 EHBP1Q8NDI1 1231 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 RSRC1Q96IZ7 334 aaKnown RBP5.34□□□□□ -1.55
PTPN13-202ENST00000411767 STIM2Q9P246 746 aa5.34□□□□□ -1.55
PTPN13-202ENST00000411767 KIF1CO43896 1103 aaKnown RBP5.34□□□□□ -1.56
PTPN13-202ENST00000411767 LMNAP02545 664 aaKnown RBP5.34□□□□□ -1.56
PTPN13-202ENST00000411767 SNX16P57768 344 aa5.34□□□□□ -1.56
PTPN13-202ENST00000411767 SDCCAG8Q86SQ7 713 aaPredicted RBP5.34□□□□□ -1.56
PTPN13-202ENST00000411767 UIMC1Q96RL1 719 aa5.34□□□□□ -1.56
PTPN13-202ENST00000411767 TRDNQ13061 729 aa5.34□□□□□ -1.56
PTPN13-202ENST00000411767 HSP90AA5PQ58FG0 334 aa5.34□□□□□ -1.56
PTPN13-202ENST00000411767 IKBKGQ9Y6K9 419 aa5.34□□□□□ -1.56
PTPN13-202ENST00000411767 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.56
PTPN13-202ENST00000411767 CTAGE15A4D2H0 777 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 SMTNL1A8MU46 457 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 BICD2Q8TD16 824 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 DRC1Q96MC2 740 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 NUF2Q9BZD4 464 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 INAQ16352 499 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 FOXD1Q16676 465 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 AEBP2Q6ZN18 517 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 LRRC43Q8N309 656 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 CLUAP1Q96AJ1 413 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 DDX27Q96GQ7 796 aaKnown RBP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 CFDP1Q9UEE9 299 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 PDIA4P13667 645 aaKnown RBP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 MNAT1P51948 309 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 IFFO1Q0D2I5 559 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 ANKRD35Q8N283 1001 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 TNIP1Q15025 636 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 CEP128Q6ZU80 1094 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 POTEDQ86YR6 584 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 TTC14Q96N46 770 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 CGNL1Q0VF96 1302 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 ZBTB16Q05516 673 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 KHDRBS2Q5VWX1 349 aaKnown RBP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 USP6NLQ92738 828 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 CHMP6Q96FZ7 201 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 MXRA7P84157 204 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 CDR2Q01850 454 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 PABPN1Q86U42 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPN13-202ENST00000411767 ANKRD24Q8TF21 1146 aa5.33□□□□□ -1.56
PTPN13-202ENST00000411767 GSTTP1A0A1W2PQM5 241 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 CBFA2T2O43439 604 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 HSPA5P11021 654 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 RBBP5Q15291 538 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 IMMTQ16891 758 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 CCDC92Q53HC0 331 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 LUZP2Q86TE4 346 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 ALDH3A1P30838 453 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 RNF187Q5TA31 235 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 CCDC150Q8NCX0 1101 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 RAD21O60216 631 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 KRT18P05783 430 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 GTF2E1P29083 439 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 CCDC122Q5T0U0 273 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 APBB1IPQ7Z5R6 666 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 PPFIBP1Q86W92 1011 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 DCAF1Q9Y4B6 1507 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 ATP2A1O14983 1001 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 BAG4O95429 457 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 PRKG1Q13976 671 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 ZBTB41Q5SVQ8 909 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 CCDC170Q8IYT3 715 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 NOL7Q9UMY1 257 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 DDX10Q13206 875 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 ANKFY1Q9P2R3 1169 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 SPECC1L-ADORA2AF8WAN1 911 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 TNNT1P13805 278 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 MTIF2P46199 727 aaKnown RBP5.32□□□□□ -1.56
PTPN13-202ENST00000411767 MICALL1Q8N3F8 863 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 ANKS4BQ8N8V4 417 aa5.32□□□□□ -1.56
PTPN13-202ENST00000411767 PRDM1O75626 825 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 MSL1Q68DK7 614 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 DHX37Q8IY37 1157 aaKnown RBP5.31□□□□□ -1.56
PTPN13-202ENST00000411767 FERMT2Q96AC1 680 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 IFT74Q96LB3 600 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 ZNF777Q9ULD5 760 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-202ENST00000411767 NUB1Q9Y5A7 615 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 SPAG9O60271 1321 aaKnown RBP5.31□□□□□ -1.56
PTPN13-202ENST00000411767 TRIM8Q9BZR9 551 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 A0A1B0GUA9 196 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 RAB11FIP3O75154 756 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 EPSTI1Q96J88 318 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 MAFGO15525 162 aa5.31□□□□□ -1.56
PTPN13-202ENST00000411767 PDE1CQ14123 709 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-202ENST00000411767 ARHGAP24Q8N264 748 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms