RNA–Protein interactions for RNA: ENST00000410694.1

RNU2-48P-201, Transcript of RNA, U2 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU2-48P, Length 191 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-48P-201ENST00000410694 TRAF7Q6Q0C0 670 aa3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 SH3BP5LQ7L8J4 393 aa3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 TSEN2Q8NCE0 465 aaKnown RBP3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 GAS2L2Q8NHY3 880 aa3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 CLP1Q92989 425 aaKnown RBP3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 TRIM52Q96A61 297 aa3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 BCL2L13Q9BXK5 485 aa3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 TUT1Q9H6E5 874 aaKnown RBP3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 CDV3Q9UKY7 258 aaKnown RBP3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 GNEQ9Y223 722 aaKnown RBP3.57□□□□□ -1.84
RNU2-48P-201ENST00000410694 ZBTB7BO15156 539 aaPredicted RBP3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 CD2BP2O95400 341 aaKnown RBP3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 SH3BP2P78314 561 aa3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 ZNF326Q5BKZ1 582 aaKnown RBP3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 TXNDC2Q86VQ3 553 aa3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 CYLDQ9NQC7 956 aa3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 USP35Q9P2H5 1018 aa3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 KIAA1024Q9UPX6 916 aa3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 CHMP3Q9Y3E7 222 aa3.56□□□□□ -1.84
RNU2-48P-201ENST00000410694 ANKRD33BA6NCL7 494 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 ERVH48-1M5A8F1 160 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 BACH1O14867 736 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 VARSP26640 1264 aaKnown RBP3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 KCNC4Q03721 635 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 MTMR3Q13615 1198 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 TJAP1Q5JTD0 557 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 PHLDB3Q6NSJ2 640 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 GIPC2Q8TF65 315 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 GTF3C2Q8WUA4 911 aaPredicted RBP3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 SCG3Q8WXD2 468 aaKnown RBP3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 AMOTL2Q9Y2J4 779 aa3.55□□□□□ -1.84
RNU2-48P-201ENST00000410694 FKBP4Q02790 459 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 FAM69CQ0P6D2 419 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 TRIM32Q13049 653 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 C4orf48Q5BLP8 95 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 CC2D2BQ6DHV5 1058 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 SH3RF1Q7Z6J0 888 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 ZSCAN29Q8IWY8 852 aaPredicted RBP3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 TNS4Q8IZW8 715 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 SIX5Q8N196 739 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 NGLY1Q96IV0 654 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 TMPRSS4Q9NRS4 437 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 CXXC1Q9P0U4 656 aaPredicted RBP3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 SLAIN2Q9P270 581 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 SEPT3Q9UH03 358 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 PCDHGA11Q9Y5H2 935 aa3.54□□□□□ -1.84
RNU2-48P-201ENST00000410694 ATAD2Q6PL18 1390 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 PPP1R12BO60237 982 aaPredicted RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 PTCD1O75127 700 aaKnown RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 ERCC3P19447 782 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 FSHRP23945 695 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 GTF2E1P29083 439 aaPredicted RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 SCTRP47872 440 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 GDF10P55107 478 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 DHX9Q08211 1270 aaKnown RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 INTS6LQ5JSJ4 861 aaKnown RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 TBCELQ5QJ74 424 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 RC3H1Q5TC82 1133 aaKnown RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 CCDC125Q86Z20 511 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 SEPT12Q8IYM1 358 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 TTC16Q8NEE8 873 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 MRRFQ96E11 262 aaKnown RBP3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 ZNF358Q9NW07 568 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 ZNF232Q9UNY5 417 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 WASF2Q9Y6W5 498 aa3.53□□□□□ -1.84
RNU2-48P-201ENST00000410694 RNF223E7ERA6 249 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 ICMTO60725 284 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 STAU1O95793 577 aaKnown RBP3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 MYT1Q01538 1121 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 ESCO1Q5FWF5 840 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 CAPN12Q6ZSI9 719 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 CDAN1Q8IWY9 1227 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 RAB6BQ9NRW1 208 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 CHIC2Q9UKJ5 165 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 BRPF3Q9ULD4 1205 aa3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 DNMT3AQ9Y6K1 912 aaPredicted RBP3.52□□□□□ -1.85
RNU2-48P-201ENST00000410694 POTEMA6NI47 508 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 MEN1O00255 615 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 NDUFB5O43674 189 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 C21orf2O43822 256 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 FAM13AO94988 1023 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 FOXC1Q12948 553 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 SF3B2Q13435 895 aaKnown RBP3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 FKBP5Q13451 457 aaPredicted RBP3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 EAPPQ56P03 285 aaPredicted RBP3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 PPP1R18Q6NYC8 613 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 CYP2U1Q7Z449 544 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 CCDC116Q8IYX3 515 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 ZNF784Q8NCA9 323 aaPredicted RBP3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 NLRP3Q96P20 1036 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 TSPAN10Q9H1Z9 355 aaPredicted RBP3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 PGPEP1Q9NXJ5 209 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 CABP1Q9NZU7 370 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 PCDH10Q9P2E7 1040 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 HCSTQ9UBK5 93 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 PPP1R1BQ9UD71 204 aaPredicted RBP3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 TLL2Q9Y6L7 1015 aa3.51□□□□□ -1.85
RNU2-48P-201ENST00000410694 SHROOM4Q9ULL8 1493 aa3.5□□□□□ -1.85
RNU2-48P-201ENST00000410694 RBM47A0AV96 593 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms